Dbfetch
ID AJ225005; SV 1; linear; genomic DNA; STD; VRL; 1092 BP. XX AC AJ225005; XX DT 17-MAR-1998 (Rel. 55, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Maize streak virus DNA for partial repB, repA, MP genes, isolate SP2, clone DE 14 XX KW MP gene; repA gene; repB gene. XX OS Maize streak virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Mastrevirus. XX RN [1] RP 1-1092 RA Peterschmitt M.; RT ; RL Submitted (23-FEB-1998) to the INSDC. RL Peterschmitt M., CIRAD-AMIS, Programme Protection des Cultures, CIRAD, BP RL 5035, 34032 Montpellier Cedex 1, FRANCE. XX RN [2] RX DOI; 10.1007/BF01718288. RX PUBMED; 8893787. RA Peterschmitt M., Granier M., Frutos R., Reynaud B.; RT "Infectivity and complete nucleotide sequence of the genome of a RT genetically distinct strain of maize streak virus from Reunion Island"; RL Arch. Virol. 141(9):1637-1650(1996). XX RN [4] RA Isnard M., Granier M., Frutos R., Reynaud B., Peterschmitt M.; RT "Quasispecies nature of three related maize streak virus isolates obtained RT through different modes of selection from a population used to asses RT response to infection of maize cultivars"; RL J. Gen. Virol. 79:3091-3099(1998). XX DR MD5; a06231ca33bacfa50b55e36f0b69edff. XX FH Key Location/Qualifiers FH FT source 1..1092 FT /organism="Maize streak virus" FT /isolate="SP2 from Reunion Island" FT /mol_type="genomic DNA" FT /clone="14" FT /db_xref="taxon:10821" FT CDS complement(<1..775) FT /gene="repA" FT /product="31.5 kd RepA protein" FT /db_xref="GOA:O73466" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:O73466" FT /protein_id="CAA12298.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK FT YIICAREAHKDGSWHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAMFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHSTSKEEYLSMIQKEFPY FT DWSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDSVSRHQMKDQESRASTS" FT CDS complement(<1..62) FT /gene="repB" FT /product="17.6 kd RepB protein" FT /db_xref="UniProtKB/TrEMBL:O93050" FT /protein_id="CAA12297.1" FT /translation="MDGFCIQTSDEGSRKQSLYIV" FT intron 42..133 FT /note="C-sense intron" FT misc_feature 929..937 FT /note="conserved nonanucleotide in the large intergenic FT region" FT CDS 1085..>1092 FT /gene="MP" FT /product="10.9 kd MP protein" FT /protein_id="CAA12299.1" FT /translation="MDP" XX SQ Sequence 1092 BP; 282 A; 228 C; 270 G; 312 T; 0 other; acgatgtaga ggctctgctt tcttgatcct tcatctgatg tctggataca gaatccatcc 60 attggaggtc agagattgca tcctcgaggg tataacaggt aggttgaagg agcatgtaag 120 cttcgggact gacctggaag atgttaggct ggagccaatc attgattgac tcattacaga 180 gtaaatcagg tgaggagggt ggatgaggat tggtgaactc ttcctgaatt tcaggaaaaa 240 gtttatttgc agagtattca aaatactgca attttgtgga ccaatcatag ggaaactctt 300 tctggatcat agagaggtac tcttccttgg aggtggagtg tgaaataatg tctcgcatta 360 tttcatcttt tgaaggcttt ttttccttta cttctgaatc agattttcct aggaaggggg 420 acttcctagg aatgaaagta cctctctcaa acatagccag cggttccttg agaatgtaat 480 ctctcaccct gttgactgat ttggcactct gaatatttgg gtgaaaccca tttatatcaa 540 agaaccttga gtcagatatc cttaccggct tctctgtctg aagcaatgca tgtaaatgcc 600 aacttccatc tttatgtgcc tctcgggcac atataatata cttgggtatc caacgaacaa 660 cgagctccca aatcatctga caggcgattt caggattttc tgggcacttt ggataggtaa 720 ggaacgtgtt agcgttcctg tgtgagaact gacggttgga tgaggaggag gccatatccg 780 acgacggagg acgtggctaa gtgatggcag attgggagct ctcaactcta taacaaccgg 840 tgcgccttcg aaatccgccg ctcctcgttt tatactggtt gtaaatgggc cggaccgggc 900 cggcccagca ggaaaagaag gcgcgcacta atattaccgc gccttctttt cctgcgaggt 960 cccggtaggg accgagcgat ttgatttaaa gcttggtcct gctttgtatg atttatctaa 1020 agcagcctaa tctaaagaat ccggtcccgg gcactataaa ttgtctaaca agtgcgattc 1080 actcatggat cc 1092 //