ID AJ132579; SV 1; linear; genomic RNA; STD; VRL; 3232 BP. XX AC AJ132579; XX DT 08-OCT-1999 (Rel. 61, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 4) XX DE Oat golden stripe virus RNA2 complete genome XX KW coat protein; coat protein readthrough; complete genome; cp gene; KW cp-RT gene; ORF3. XX OS Oat golden stripe virus OC Viruses; Riboviria; Virgaviridae; Furovirus. XX RN [1] RP 1-3232 RA Adams M.J.; RT ; RL Submitted (27-JAN-1999) to the INSDC. RL Adams M.J., Crop and Disease Management, IACR-Rothamsted, Harpenden, Herts RL AL5 2JQ, UK. XX RN [3] RX DOI; 10.1006/viro.1999.9880. RX PUBMED; 10497118. RA Diao A., Chen J., Gitton F., Antoniw J.F., Mullins A.M., Hall A.M., RA Adams M.J.; RT "Sequences of European wheat mosaic virus and oat golden stripe virus and RT genome analysis of the genus furovirus"; RL Virology 261(2):331-339(1999). XX DR MD5; 8dc93dd601acf099141d7f587ca288ea. DR BioSample; SAMEA3283056. DR GrainGenes; AJ132579; AJ132579. XX FH Key Location/Qualifiers FH FT source 1..3232 FT /organism="Oat golden stripe virus" FT /segment="RNA2" FT /host="Avena sativa (oat)" FT /mol_type="genomic RNA" FT /country="United Kingdom" FT /db_xref="taxon:45103" FT CDS 321..2372 FT /transl_except=(pos:849..851,aa:OTHER) FT /gene="cp-RT" FT /product="coat protein readthrough" FT /note="may be initiated at position 204" FT /note="isolate may have deletion in readthrough portion" FT /db_xref="GOA:Q9IWA8" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:Q9IWA8" FT /protein_id="CAB57873.1" FT /translation="MPVTPGYTGYNKELNVMANTHAFIRMSTLMNQIEGWQSTRASVLS FT HLGIMLNAVSKLGERNFFSRNKRFGTHTQDGDEIFCDLGGEAVGQVLGRLTVALQPAKG FT EGTQTRNSKRGVPPAAGQVEGEEQGQSDQTLQIANAVSDLMNYVRTKDYTMNECYTQDS FT FEAKYNLKWEGSAXRGGVSEKTRVQVVEELADRIVLADDLGIFPRRGENGFIIVDEPEV FT LYAELEDKILSFEHSVYHPRAITVETEVQPLTVKTADSENLVMMDEEDSIIVTEVLVDD FT ESDYFWLYLLLLLVSVLISLFILLSRPFILSLGNRREVFGGDICYKIAEWLWKVRMWLL FT KRAMYRFGNLGVVRKNHTKSAMRRYLRDYNFQLEGWETAINCSPGEALIAADQHVLVQE FT VRELLDLEGNLMSVEKIRKIFENYNVNNYKITKWLDKQVIRHALLAVNETLKNDEITLE FT EGMLNLACATFDQILECDVETQRGSMYFGDLIALQFAFRLIGTPEFSDFVVAYKGNLYP FT CYVEAIKRHASKLELQHAEDDDRKRSEKALEWLLMAGQGAFALSSAMETFTPAEFQDEM FT RQVVQAYADTTFHEADRPLLSGLGASSIGDVASEFVTGDISAGTDVETSSSLSIGTASR FT ARKRSIARNIRMYPGGAVAHGGVKAPRVSGTSGVGGMKMKFTSKPMAS" FT CDS 321..851 FT /gene="cp" FT /product="coat protein" FT /note="may be initiated at position 204" FT /db_xref="GOA:Q9QBU6" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:Q9QBU6" FT /protein_id="CAB57874.1" FT /translation="MPVTPGYTGYNKELNVMANTHAFIRMSTLMNQIEGWQSTRASVLS FT HLGIMLNAVSKLGERNFFSRNKRFGTHTQDGDEIFCDLGGEAVGQVLGRLTVALQPAKG FT EGTQTRNSKRGVPPAAGQVEGEEQGQSDQTLQIANAVSDLMNYVRTKDYTMNECYTQDS FT FEAKYNLKWEGSA" FT CDS 2421..2942 FT /product="hypothetical protein" FT /note="ORF3" FT /note="cysteine-rich" FT /db_xref="GOA:Q9QBU5" FT /db_xref="InterPro:IPR007609" FT /db_xref="InterPro:IPR016567" FT /db_xref="UniProtKB/TrEMBL:Q9QBU5" FT /protein_id="CAB57875.1" FT /translation="MSAAVHSCAKCADGFTRVVCVSKYRNSVYKSLGMEVVKCRLPSAC FT GVNCRMPAALVLVKGHPELSMDGFCGEKHRGYVVSGAWRHAQLRSLNAELDKLTEKEES FT LRTQIIVLTAAAKTADAPVYVPKKLNKLKVEVSDVTEKIHQKSVGLAVVMDAILADLSP FT DASPKRRSPA" XX SQ Sequence 3232 BP; 845 A; 589 C; 875 G; 923 T; 0 other; gtattttctt ttcacacagt tcaagcgtta gcttcggacg acgtggagac tacctttctt 60 accaggataa gaaataagat attttctggg ttctgcaaca aacgttgtgg aaattcaaaa 120 ttgttgtcct aggcctgcca cggcaataaa tcctaggcgt ctcagttttg gtttttcgct 180 acgttagttg ttaccacgct gcgctggata agccacttaa gttgaagggc gatatccatc 240 agtcgttgca ggcagctagt taaatcacca aggagagtac tgaggctttg gagaagctcg 300 ttactacggt cttaccaaag atgcctgtta caccgggtta cacaggttac aacaaggaac 360 tgaacgtaat ggcaaatact catgcattta taaggatgag tactttaatg aaccagatag 420 aaggatggca gagtactaga gcaagcgttc tgtctcacct tggtatcatg ctcaacgctg 480 tgagtaagtt gggggaaagg aacttctttt cgaggaataa gcggttcggt acgcacactc 540 aagatggaga tgaaatattc tgcgaccttg ggggagaagc ggtgggtcag gtgttaggta 600 gactaacggt ggccctgcag cccgctaagg gcgaaggtac tcagacgcga aattcgaaaa 660 gaggggtccc accggctgct ggtcaagtgg aaggcgagga acagggtcag tcagatcaga 720 ctttgcagat cgcgaatgct gtatccgact tgatgaatta tgtgaggact aaggattaca 780 ctatgaatga atgttacact caagattctt ttgaggctaa atacaatctg aagtgggaag 840 gtagtgcctg acggggcggc gtctcggaga agactcgtgt gcaagttgtc gaagagctag 900 ctgatagaat agtattagcc gacgatttag gcatttttcc gagacgcggt gaaaatggtt 960 ttataatcgt agacgaacct gaagtactct acgcggagct ggaagacaag atcttaagtt 1020 ttgagcattc tgtttatcac cctcgggcga taacggtcga aactgaggtt caacctttga 1080 cggtaaaaac tgcagattca gagaacttgg tgatgatgga cgaggaggat tccattatag 1140 ttacagaagt tttggtggac gatgagtccg actatttctg gctgtactta ctgctgctcc 1200 tagtttctgt tctgataagt ctgtttattc ttttgtcacg gccattcatc ctttccttag 1260 ggaaccggag ggaggttttt ggtggtgaca tttgttataa aatagcggaa tggttatgga 1320 aagttcgcat gtggttgctg aaacgcgcta tgtatcgttt tggcaatctt ggtgtcgttc 1380 gaaagaatca cactaagagc gcgatgagga gatacttgcg tgattacaat ttccaacttg 1440 agggttggga aactgctatc aactgctcgc ctggggaggc acttattgct gctgatcagc 1500 atgtactggt gcaagaggtg cgagagttgt tagatttaga gggtaatttg atgagtgtgg 1560 agaaaataag aaaaattttc gagaactaca acgtcaataa ttacaagatt actaaatggt 1620 tggacaagca ggttataaga catgccttat tggctgttaa cgaaacactt aagaatgatg 1680 aaattacctt agaagaaggt atgctgaacc tggcttgtgc gacgtttgac caaattcttg 1740 agtgtgatgt tgagactcaa cgtgggagca tgtatttcgg agacctaata gctttgcaat 1800 ttgcctttcg tctgataggg acacccgagt tctcggactt tgttgtcgcc tataagggca 1860 atttgtatcc ctgttacgtg gaggccatca aaaggcacgc aagtaagttg gagttgcagc 1920 atgctgaaga tgatgatagg aagaggagcg aaaaggcact cgaatggtta ctgatggctg 1980 gacaaggagc gtttgcactg agctctgcca tggagacgtt tacgcctgct gaatttcagg 2040 acgagatgcg gcaggttgtg caagcgtatg ctgatactac ttttcatgaa gctgacagac 2100 cgttgttaag cggactgggt gcttctagta ttggtgatgt ggctagtgag tttgtcacgg 2160 gcgatatttc tgctgggaca gatgttgaga catcttcttc cttgagcatc ggcactgcta 2220 gtcgagcaag gaagagatct attgcgagga atattcgtat gtaccctggg ggggctgtgg 2280 cgcacggtgg tgtgaaagca ccgagagtga gtggtacaag tggtgttgga ggtatgaaga 2340 tgaaattcac tagtaagcct atggcgtcct agtgtgttgt ttttgtttta atcttacatc 2400 caatccataa ctacggtatc atgtctgctg ctgttcacag ttgtgctaaa tgtgctgatg 2460 gctttaccag agtcgtttgt gttagtaagt atcgtaatag tgtttacaag tccctgggta 2520 tggaggttgt gaaatgccgt ctgcccagtg cttgtggagt caattgtcgc atgcccgctg 2580 ctttggtttt ggtgaagggt catcctgaac tgtctatgga cggtttctgt ggtgaaaagc 2640 atcgcggcta cgttgtttct ggtgcatggc gtcacgctca actgcgaagt ttgaacgctg 2700 agttggacaa gttgacggaa aaggaggagt cattgcggac gcaaattatc gttttgactg 2760 ctgctgctaa gacggcggat gcacctgtct atgtacctaa aaagctcaac aaactgaaag 2820 ttgaagtttc tgatgtcaca gagaagattc accaaaaaag tgttggcctc gctgtggtga 2880 tggacgctat actagctgat ctttcgcctg acgcatcgcc gaaacgacgt tcgcctgctt 2940 agttccttta catttctttg tttcgtctgt ctgttctact ggagtcggta accaggataa 3000 agaacccgag cgaaattaca aaaaagattt tctttttgta tgtaattttc attttgatat 3060 ataaataaat gggggcaagt ctgttgcttt ggctttagac tttccatagt cttaaaacta 3120 tggcgtggtc ttcacgaaag aagatggtgc ttgttaattc accgaaatca aattaacgaa 3180 agacttttac agtctataaa ctgtaacgtg gtccgcacga tagcggatgg tg 3232 //