ID AJ132577; SV 1; linear; genomic RNA; STD; VRL; 3683 BP. XX AC AJ132577; XX DT 08-OCT-1999 (Rel. 61, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 4) XX DE Soil-borne cereal mosaic virus RNA2 complete genome XX KW coat protein; coat protein readthrough; complete genome; cp gene; KW cp-RT gene; ORF3. XX OS Soil-borne cereal mosaic virus OC Viruses; Riboviria; Virgaviridae; Furovirus. XX RN [1] RP 1-3683 RA Adams M.J.; RT ; RL Submitted (27-JAN-1999) to the INSDC. RL Adams M.J., Crop and Disease Management, IACR-Rothamsted, Harpenden, Herts RL AL5 2JQ, UK. XX RN [3] RX DOI; 10.1006/viro.1999.9880. RX PUBMED; 10497118. RA Diao A., Chen J., Gitton F., Antoniw J.F., Mullins A.M., Hall A.M., RA Adams M.J.; RT "Sequences of European wheat mosaic virus and oat golden stripe virus and RT genome analysis of the genus furovirus"; RL Virology 261(2):331-339(1999). XX DR MD5; d15cb400380d65fb897ebb93249edb72. DR BioSample; SAMEA3283056. DR EuropePMC; PMC5172238; 15629034. DR RFAM; RF01081; SBWMV1_UPD-PKe. DR RFAM; RF01082; SBWMV1_UPD-PKh. DR RFAM; RF01103; UPD-PKc. DR RFAM; RF01107; SBRMV1_UPD-PKf. DR RFAM; RF01109; SBRMV1_UPD-PKd. DR RFAM; RF01112; UPD-PKg. XX FH Key Location/Qualifiers FH FT source 1..3683 FT /organism="Soil-borne cereal mosaic virus" FT /segment="RNA2" FT /host="Triticum aestivum (wheat)" FT /mol_type="genomic RNA" FT /country="France" FT /db_xref="taxon:100887" FT CDS 208..2592 FT /transl_except=(pos:856..858,aa:OTHER) FT /gene="cp-RT" FT /product="coat protein readthrough" FT /function="virion assembly and fungus transmission" FT /note="may be initiated at position 328" FT /db_xref="GOA:Q9IWB0" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:Q9IWB0" FT /protein_id="CAB57863.1" FT /translation="MDKLTRLKGEVDRSLQKAADKVTAESTESLQSKVVVQLPQMAVKN FT GYTGYNKELNLMASIHPFIRLGTLISQIEGWQATRASILTHLGVMLNGVSKLGERNFFS FT RQKRFGTHTQDGDEIFCDLGGEAVMQIITRLTVSLQSAKGEGSQTRNAMIGTTPTTNQF FT EGEEQGQTDQTLAISNALAEFMTFIHTKDFTTNECYTQDSFEAKFNLKWEGTSXRDGVS FT GKLRARIVEDFQNRLVLADDLGVFPRRNLSGEVIRDEPEIIYAELEDKLLSFESSVYHP FT KAVTMETEVSVLPKLQTDLETGNAEEDIETTVVTEVLIDEESSYFWLYLVFLLLSILIS FT CFIALSRWFICFLGNRGGRGGPFFRRIATALWSARLWLLSKAARRYGNLGIVRKRYTRA FT GVRRYLRDYNFQFDEWESVVDCAPSEALIVADQRMFVRAVNKIVDLKGDFDAIEIVKKT FT FLNYGVRNYKVERWLNRHTIRSALGVLSDVTRREVLTLTDGMLSLENATLDELLGCDVE FT SQRNSMYFKDIVALQFAFRLIGAPEFSDFVMAYKGTLYRCYVEATKRHTSMLEQFHVSE FT DQKRRNEKALEWLLMLGQGAFVFSAAVTAGVTIFKIHKWIKSRMLLRALQMLPSVGGGG FT NEGGGRFSEEALNRFAASQTPEERIEALHTDFDTAADDMESFLPEDMQAEIRHVIQAHV FT DGTYHAADLPFLGDMSDAVVPAMADSVVDLSNVSSDVGSVDTSVSSVTSKVRRRAVASN FT TRIYPSVGNVRYSDIKSPRVSGKSGISSMKMKITSRPMLAS" FT CDS 208..858 FT /gene="cp" FT /product="coat protein" FT /note="may be initiated at position 328" FT /db_xref="GOA:Q9QCE6" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:Q9QCE6" FT /protein_id="CAB57864.1" FT /translation="MDKLTRLKGEVDRSLQKAADKVTAESTESLQSKVVVQLPQMAVKN FT GYTGYNKELNLMASIHPFIRLGTLISQIEGWQATRASILTHLGVMLNGVSKLGERNFFS FT RQKRFGTHTQDGDEIFCDLGGEAVMQIITRLTVSLQSAKGEGSQTRNAMIGTTPTTNQF FT EGEEQGQTDQTLAISNALAEFMTFIHTKDFTTNECYTQDSFEAKFNLKWEGTS" FT CDS 2662..3159 FT /product="hypothetical protein" FT /note="ORF3" FT /note="cysteine-rich" FT /db_xref="GOA:Q9QCE5" FT /db_xref="InterPro:IPR007609" FT /db_xref="InterPro:IPR016567" FT /db_xref="UniProtKB/TrEMBL:Q9QCE5" FT /protein_id="CAB57865.1" FT /translation="MSACAFHSCDKCVDGPKNVVCVSKYRHSVYKVMGLSVVKCRLPAD FT CGVNCGMPAAFVLEDGHPRLTLDGYCGEKHKGYVISGAWRHAQLRTLNDELDKLEKRGE FT FLKTQIRVLSETANANTAPVYAPTKINRMKAEVQDVNVKIQDRSTALAGVMDAVALNLS FT PK" XX SQ Sequence 3683 BP; 981 A; 644 C; 966 G; 1092 T; 0 other; attatcatta tcacgttacg ttgagtgtta actcttcttg tgatattacc tttcttacca 60 ggataagaaa taaaatattt tctgggttat cactatctcg aaacttagca gagactaaca 120 tctcgctgct ctaggcctgc aatgcaataa atcctaggta gtcagctgtt agcgtgtgac 180 gttgaaagat agtgttattt cggttcgctg gataagctta cgagacttaa aggtgaggtc 240 gacaggtcct tacaaaaggc tgcggataag gtcactgctg aaagtactga atcgttacaa 300 tcgaaagtgg ttgtgcagtt acctcaaatg gctgtcaaga acggttatac gggttacaac 360 aaggaattga atttgatggc atctattcat cctttcatta ggctgggtac tttgataagt 420 cagattgagg gatggcaagc aacacgagct agcatactta cccatttagg tgtaatgctc 480 aacggtgtta gtaagttagg tgagcgaaat ttcttctcta gacagaaaag atttgggaca 540 cacactcagg acggtgacga gatattttgt gaccttggag gtgaggcagt tatgcaaatc 600 atcaccagac tcacagtatc actacaatcc gcgaagggtg agggttccca gaccagaaat 660 gctatgatag ggacgacgcc gactaccaac caatttgagg gtgaggaaca aggtcaaact 720 gatcagacgt tagccatttc gaatgcgctg gctgagttta tgactttcat ccacactaaa 780 gatttcacga caaatgagtg ttacacgcaa gactcttttg aagccaaatt taatttgaag 840 tgggaaggta ccagttgacg ggacggcgtc tcgggaaagt tgagggcacg cattgtcgaa 900 gatttccaga ataggctggt tttggccgac gatttgggtg tttttccgag acgcaatctt 960 agcggtgagg tgataaggga cgagcctgaa ataatatatg cagaactaga ggacaagctc 1020 ttgagctttg agagttctgt atatcatcct aaagctgtga ctatggagac agaagtgtct 1080 gtattgccga aattgcaaac ggatcttgaa acaggtaacg ctgaagaaga cattgagaca 1140 actgtggtta ctgaggtact catcgatgag gagagcagtt acttctggtt atacctcgta 1200 tttctcttat tgtctatcct tatatcgtgt ttcattgcgc tgtcgcgatg gtttatatgt 1260 tttctcggta atagaggagg gcgcggtggc cctttctttc ggagaatagc cactgcattg 1320 tggagcgcgc gactgtggct gttaagtaag gcggccagac gttacggcaa tcttggaatc 1380 gtacgaaaga gatatacacg tgctggcgtg cgcaggtact tgcgtgatta taatttccaa 1440 tttgatgaat gggaaagcgt ggttgactgt gctccgagtg aagctctaat cgtcgcagat 1500 cagagaatgt ttgtgagggc tgtgaacaag attgtggatt taaagggtga ttttgatgct 1560 attgaaattg tcaagaagac tttcctgaat tacggagtcc gcaattacaa agtggaaaga 1620 tggttgaaca ggcatacaat acgctcggca cttggtgtac tgagcgatgt tacgaggaga 1680 gaagtactta cattaactga tggtatgcta tcattggaga acgctacgct tgatgagtta 1740 ctggggtgtg atgttgagag tcaacgaaat agcatgtact ttaaggacat tgttgccttg 1800 cagtttgctt ttcgtcttat tggtgcacca gaattctccg actttgtgat ggcttacaaa 1860 ggtactttgt atcgctgtta tgtggaagcg actaagagac atacttcgat gttggagcag 1920 tttcatgtta gtgaagatca gaagagaaga aacgagaagg cgttagagtg gttgcttatg 1980 ctggggcaag gagctttcgt tttttctgct gctgtaacag ctggtgttac gatcttcaaa 2040 attcataaat ggataaaaag tcgtatgctc ttaagggctc tgcaaatgct accgtctgtt 2100 ggtggtggtg gtaacgaagg tggtggtaga ttttctgagg aggctcttaa cagatttgca 2160 gcaagtcaaa ctcctgagga acgcattgag gctctgcata ctgatttcga cacggctgct 2220 gatgacatgg aaagtttttt accagaagac atgcaggctg agattagaca tgttattcaa 2280 gctcacgttg atggaactta tcacgcagca gatcttcctt ttctgggcga catgtctgat 2340 gccgttgttc ctgctatggc agattctgtt gtcgatttga gtaatgttag tagtgatgtg 2400 ggaagtgtgg atacgtctgt ttcaagtgtg actagtaagg ttagacgtcg tgccgttgct 2460 agcaacacga ggatttaccc gagtgttggt aatgttaggt atagtgatat taagtcaccg 2520 agggttagtg gtaaaagtgg aattagtagt atgaaaatga aaatcactag taggcctatg 2580 ttggcgtcct agtgtgttgt ttttaaaatt acttgttcac accgctaccg ctggtctttc 2640 tcggtttttc ttcctaacat tatgtcggct tgcgcttttc actcttgcga taagtgtgtt 2700 gatggaccca agaacgttgt atgtgttagt aaataccgtc atagtgttta taaggttatg 2760 ggcctttctg ttgttaagtg tcgtcttcct gcagattgtg gtgttaattg tggtatgcct 2820 gcagcttttg ttctcgaaga tgggcatcct agactaactc ttgatggtta ctgtggtgag 2880 aaacacaaag gctacgtgat ttctggtgct tggcgacatg cgcaacttcg tactttaaat 2940 gatgaacttg ataagttgga gaagaggggg gagtttttga aaactcagat aagagtgctc 3000 agtgaaactg ctaacgctaa cactgctcct gtatatgctc ccacgaaaat taatcgtatg 3060 aaggcggagg ttcaggatgt taatgtaaaa atccaggacc gtagtactgc tcttgcaggt 3120 gtcatggatg ctgtcgcgtt gaatttatca ccgaaatagt tcgccacgga agtgtggagc 3180 catatgatga gtacgttaac gttgtatttg tataatggtt atatgtgtgt actggaatag 3240 gtaaccagga taaagaaccc tagcgaaaat gtcctaccaa aacattatgc attgtggttt 3300 tgttgtgtgg tttgtttttg cttatattgc tatgttgcat gtgtgtgtta aaaatagtct 3360 aacatgtcgg gcagagacac gtcgttgccg tcacgataga cggagccgct gggattgcgg 3420 attataaatc gaacaagcct atttgtacgg gtcgagtaca aacgtggcca tcacgataga 3480 tggttctgtt tttcgaacag atgtaaatcg gaggcgtcgt gcagtacggt aaactgcaca 3540 tctatcctct agtttctatt gatgtaattg aaaaaagatc aatattttac gatgatgagg 3600 agcgactggt ggtcgcggta gctatgacac agctactaag aggggttcaa atcccccccc 3660 gaaccggagg gtaatccggc cca 3683 //