ID AJ132576; SV 1; linear; genomic RNA; STD; VRL; 7025 BP. XX AC AJ132576; XX DT 26-SEP-1999 (Rel. 61, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 4) XX DE Soil-borne cereal mosaic virus RNA1 complete genome XX KW complete genome; ORF1; ORF1 readthrough; ORF3; putative movement protein; KW replicase; replication protein. XX OS Soil-borne cereal mosaic virus OC Viruses; Riboviria; Virgaviridae; Furovirus. XX RN [1] RP 1-7025 RA Adams M.J.; RT ; RL Submitted (27-JAN-1999) to the INSDC. RL Adams M.J., Crop and Disease Management, IACR-Rothamsted, Harpenden, Herts RL AL5 2JQ, UK. XX RN [2] RX DOI; 10.1006/viro.1999.9880. RX PUBMED; 10497118. RA Diao A., Chen J., Gitton F., Antoniw J.F., Mullins A.M., Hall A.M., RA Adams M.J.; RT "Sequences of European wheat mosaic virus and oat golden stripe virus and RT genome analysis of the genus furovirus"; RL Virology 261(2):331-339(1999). XX DR MD5; 63ece2a236e45a2611fdd4301e6de514. DR BioSample; SAMEA3283056. DR RFAM; RF01081; SBWMV1_UPD-PKe. DR RFAM; RF01082; SBWMV1_UPD-PKh. DR RFAM; RF01103; UPD-PKc. DR RFAM; RF01107; SBRMV1_UPD-PKf. DR RFAM; RF01109; SBRMV1_UPD-PKd. DR RFAM; RF01112; UPD-PKg. XX FH Key Location/Qualifiers FH FT source 1..7025 FT /organism="Soil-borne cereal mosaic virus" FT /segment="RNA1" FT /host="Triticum aestivum (wheat)" FT /mol_type="genomic RNA" FT /country="France" FT /db_xref="taxon:100887" FT CDS 108..5558 FT /transl_except=(pos:4032..4034,aa:OTHER) FT /gene="ORF1 readthrough" FT /product="replication protein" FT /db_xref="GOA:Q9IWB1" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR013664" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9IWB1" FT /protein_id="CAB56599.1" FT /translation="MPIDSSSILGIISEEDVVRAAISTSATKFGSQLHGTVCDHVKETY FT LDAVERQKIKKKIDVRRDLSQEQLQLLNDLYPERHIVSSNCERGTHSFAAASRKIETDL FT LLSRIPKRAWVYDIGGNWATHVKRNDGRKVHCCCPTLDIRDAGRKTTRWASIEKYQDEK FT ETIPVEVGEKLKRIQEDENSTYANLKAGRCQPEDLNGKWYCGNKFEECVFTAERAYAMA FT IHSIYDIDLMDLANALEEKRVRIMSGTFLFSVDLLLGKKQGRLPTMDGFFEVEGDYVKY FT GFHNDTNPGYKHKLSQLMKYLTKTFVTAKGGSIYYLELTELRGDVMFFTMTDATEARMN FT GVVRDESFKCIPMEDNGNVVFPLFEVDKRSDTLCFSEILLPRDFVQRAVEYTGRLKGNQ FT LTAENVNTYLTSTNNTIIIGGSSKKNVNKVDSLLIAQITTTLVVWTELMHARHKRVMEL FT LRLQMKEDVDFKSLAHAAFLKVFGKVSFYQKALRSFANWISYCHGSDAIHFRPVPLYVE FT ITDRVKLWKTYAPNQGFVLDMEDLDEKIKLHEITEREKYDVSRHIVSTKLGELATGDYG FT TSERACDVVRTDNRRKTDFGDLLEGEVATNFIDSWCEKDDHFNFSYDDAESKYVWCAKL FT LRMVWDTLIPPMEFAPVYVDDKDASIRIASRIEKREKNDAEVTTDGTSGFVGTERKEFD FT AAVDLLTVAGNKTTDELKAQRTEVVAAANAVVAQNKLYTESEVSNAVKLWADVDDEFLE FT EEETTVPVADITDHASVIEENFENLQQGSSSNSTPIVVARENLFVRNDMGPSAVTSDDC FT STEGELREKSWASLAEEESDSSYYLNTAIISGKVQKSALPKAPDFSKYATFQAKAKQEA FT LWYLQCKIVSDRTTLRSIIDDHLRGMFHNDTCELPKDSAFLDHTTDNGGAWMYGKPSRF FT GHSYGVGFSLNSKREITKCELVKLMWNYDGRGQISQKPVNTKAFSYLLLSELTFMMNEL FT LIFCNLQKVIKKKERTKHALITLRDGVPGCGKSTWIVENANPMKDMVLSMCKEATEDLK FT EKFAKRLRCTESALRRVRTVDSFLMHDYDKFRAATVHFDEALMAHAGMVYFCADILGAK FT RVLCQGDSQQIPFINRVESITLKYAKLQIDDTEYVRLTYRSPIDVAHYLTKKSYYSGGR FT VLTKNTTLRSMNTVGPRDAKPMTSVHCVPYHRDTQYLTFTQSEKADLYKALRNRGPVNV FT NTVHETQGKTFDDVIVVRLKTTENEIYPGGRKAQPYEIVATTRHRRSLVYYTAIEDRLF FT SDINDMRDVMEDKLMKNLSSELAKXRFGSKYESILICDREVRVPDVGNSVILQDFYDRV FT LPANSTMDSHFDGYEVATTDITIEVENCKVHPHKNVKVWQDKRGLIPVLRTAMPPKRQN FT GMVEALLALKKRNMAAPKLQEAVNEFEVIDRTISRARSISLNEDMIDESLVSTRESNMR FT WWEKQSHTARQQLKSEYRVLHELDLCKYSHNIKGDEKPKNDLTPQREYGALQTVVYPDK FT IVNALFGPVMKEINERIGMALKPHVVYNSRMNAEELNRTVEFLDPEDEYDAFEIDFSKF FT DKSKTSLHIRAVIELYKLFGLDDMLSLLWEKSQCQTTVIDRTNGITAYLLYQQKSGNCD FT TYGSNTWSAALALLESMPLEKAKYMIFGGDDSLILFPKQLCIEDPCRRLASLWNFDCKL FT FNFRHNMFCGKFLLKIGNKFKFAPDPMKLLTKLGRKDIADGKLLSEIFVSMGDNYCSYR FT DYRILEQLAVAVQERYRTNEDPTAMLITLKKYIFDFKLLASLFNYSGEFEVCKVGRNFE FT W" FT CDS 108..4034 FT /gene="ORF1" FT /product="replicase" FT /db_xref="GOA:Q9QCE8" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR013664" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9QCE8" FT /protein_id="CAB56600.1" FT /translation="MPIDSSSILGIISEEDVVRAAISTSATKFGSQLHGTVCDHVKETY FT LDAVERQKIKKKIDVRRDLSQEQLQLLNDLYPERHIVSSNCERGTHSFAAASRKIETDL FT LLSRIPKRAWVYDIGGNWATHVKRNDGRKVHCCCPTLDIRDAGRKTTRWASIEKYQDEK FT ETIPVEVGEKLKRIQEDENSTYANLKAGRCQPEDLNGKWYCGNKFEECVFTAERAYAMA FT IHSIYDIDLMDLANALEEKRVRIMSGTFLFSVDLLLGKKQGRLPTMDGFFEVEGDYVKY FT GFHNDTNPGYKHKLSQLMKYLTKTFVTAKGGSIYYLELTELRGDVMFFTMTDATEARMN FT GVVRDESFKCIPMEDNGNVVFPLFEVDKRSDTLCFSEILLPRDFVQRAVEYTGRLKGNQ FT LTAENVNTYLTSTNNTIIIGGSSKKNVNKVDSLLIAQITTTLVVWTELMHARHKRVMEL FT LRLQMKEDVDFKSLAHAAFLKVFGKVSFYQKALRSFANWISYCHGSDAIHFRPVPLYVE FT ITDRVKLWKTYAPNQGFVLDMEDLDEKIKLHEITEREKYDVSRHIVSTKLGELATGDYG FT TSERACDVVRTDNRRKTDFGDLLEGEVATNFIDSWCEKDDHFNFSYDDAESKYVWCAKL FT LRMVWDTLIPPMEFAPVYVDDKDASIRIASRIEKREKNDAEVTTDGTSGFVGTERKEFD FT AAVDLLTVAGNKTTDELKAQRTEVVAAANAVVAQNKLYTESEVSNAVKLWADVDDEFLE FT EEETTVPVADITDHASVIEENFENLQQGSSSNSTPIVVARENLFVRNDMGPSAVTSDDC FT STEGELREKSWASLAEEESDSSYYLNTAIISGKVQKSALPKAPDFSKYATFQAKAKQEA FT LWYLQCKIVSDRTTLRSIIDDHLRGMFHNDTCELPKDSAFLDHTTDNGGAWMYGKPSRF FT GHSYGVGFSLNSKREITKCELVKLMWNYDGRGQISQKPVNTKAFSYLLLSELTFMMNEL FT LIFCNLQKVIKKKERTKHALITLRDGVPGCGKSTWIVENANPMKDMVLSMCKEATEDLK FT EKFAKRLRCTESALRRVRTVDSFLMHDYDKFRAATVHFDEALMAHAGMVYFCADILGAK FT RVLCQGDSQQIPFINRVESITLKYAKLQIDDTEYVRLTYRSPIDVAHYLTKKSYYSGGR FT VLTKNTTLRSMNTVGPRDAKPMTSVHCVPYHRDTQYLTFTQSEKADLYKALRNRGPVNV FT NTVHETQGKTFDDVIVVRLKTTENEIYPGGRKAQPYEIVATTRHRRSLVYYTAIEDRLF FT SDINDMRDVMEDKLMKNLSSELAK" FT CDS 5620..6600 FT /gene="ORF3" FT /product="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:Q9QCE7" FT /protein_id="CAB56601.1" FT /translation="MGSKDVKGDSFESVYNKILDLQTEGAVGADSLKTNRQRSFNIENK FT YVEKALVQQDIATKMREGWTTWTKTNKEEGTPYNMSYSCVLLNVIPTVPRGYSGTVEIS FT LIDSGLSPLENVIPDQTQMMELGNGPHVMCFFMHYGIPLNDEGRVIKLSFKIEAEMASK FT KMSVMNVYSYWTQKQGHLSVYTEPQRSTCSKLLLGYDKSLKLKTRDDVRRFVPRSLATN FT NLEQSVPKMLPNSINILKENVPLFKKESVLDLTEQEREKQKKLETLRSVNEAQRRKSAQ FT EMQKRNDDLIRANVQKQKAKQSEIDENRKNHYDVSGVKFGSVGSD" XX SQ Sequence 7025 BP; 2023 A; 1178 C; 1872 G; 1952 T; 0 other; gtatttccta tcacttaacg tcgttagaca acacaagtgt taacgaaata cagatcttgt 60 tagacaaagg cacgcttcgg cgataaatcc tttgtttaca agacacaatg ccgattgata 120 gcagttcaat attgggtatt atcagtgagg aagatgttgt gcgggctgca atcagcacta 180 gtgccacgaa attcggttcg caattacatg gtacagtgtg tgatcatgtg aaggagacat 240 atcttgacgc ggttgaaaga caaaaaataa aaaagaaaat tgacgttcgt agggacctat 300 cacaggagca gctgcagttg ctgaacgatt tgtatcccga acgacacatc gtttctagca 360 attgcgaacg cggtacacac agctttgcag cggcttctag gaagatcgag acggacttgt 420 tgttaagtcg aataccaaaa agggcgtggg tttacgatat tggtggcaat tgggcgacac 480 atgtgaagcg gaacgatggt aggaaagttc actgttgctg tccgacgttg gacattcgtg 540 acgctggtcg gaagacgact cgatgggctt ctattgagaa ataccaagac gaaaaggaaa 600 cgattcctgt tgaagtcgga gagaaactca agaggataca ggaggacgag aatagcacct 660 atgctaatct taaagctggc agatgccaac cagaggatct caatgggaag tggtattgtg 720 gtaataagtt cgaggagtgc gtgtttacgg ctgaaagagc ttatgcgatg gctatccaca 780 gtatttatga cattgatctg atggacttgg ccaacgcttt agaagaaaaa cgtgtaagga 840 taatgagtgg cacgtttctg ttttcagtgg atctactgct ggggaaaaaa caggggagac 900 ttccaacgat ggacggtttt ttcgaggtgg agggtgatta cgtgaagtat ggttttcata 960 atgacaccaa tccgggttac aagcacaaac tgagtcagtt gatgaagtat cttacgaaaa 1020 cctttgtgac tgctaaaggg ggttcgatat attatcttga actgacagag ttgcgaggtg 1080 acgtgatgtt ctttactatg acggacgcga cggaggctag gatgaatggt gtggttcggg 1140 atgagtcttt caagtgcata cctatggaag acaacggaaa tgtggtattt cctttgtttg 1200 aagtagacaa gcgtagcgat acgctttgct tctcggagat tttgctaccc cgtgattttg 1260 tgcagagggc ggttgagtat accggtcgtt tgaaagggaa tcaactcact gcggaaaacg 1320 taaacacata tctgacgtcg accaataata ccattattat tggcggttcg tcaaagaaaa 1380 atgtgaacaa ggttgattca ctgctgatag cacagataac tacgacgttg gtagtttgga 1440 ctgaactgat gcatgcgagg cacaagcgag ttatggagtt gctgaggttg cagatgaagg 1500 aagacgtgga ttttaagtct ttggcacatg ctgcatttct gaaagtgttc ggtaaggtga 1560 gtttctatca aaaggcgttg aggagtttcg cgaattggat ttcatattgt catggctctg 1620 acgctattca ttttcgtcct gtgccactgt acgttgaaat aaccgacaga gtgaaattgt 1680 ggaaaactta tgcaccgaat cagggattcg tattggacat ggaagatttg gacgagaaga 1740 taaaactgca tgagataacc gagagggaaa agtacgatgt tagtagacac attgtgtcta 1800 ctaaacttgg cgagttggct actggagatt atggtacatc cgaaagagct tgtgatgtgg 1860 tgcgcactga taacaggaga aaaactgatt ttggtgatct gttggaagga gaggtggcca 1920 caaacttcat tgactcttgg tgcgagaaag atgatcattt taacttttct tatgatgatg 1980 ctgaatcaaa gtacgtgtgg tgtgcaaagt tgctgagaat ggtgtgggat actttgatcc 2040 ctcccatgga atttgcgccc gtttatgtgg atgacaagga cgcgtcgatt cgcattgcat 2100 cgagaattga gaagagagag aaaaatgatg ctgaggttac tactgatggt acctctggat 2160 ttgttggcac tgagaggaaa gagtttgacg ctgctgtgga tcttctgacg gttgctggga 2220 acaaaaccac ggatgaactg aaagctcaga gaacagaggt cgttgctgcg gctaacgcgg 2280 tagtcgcgca gaataagctg tacacggaat ctgaggtgtc taatgcagtg aagctttggg 2340 ctgatgttga tgacgaattt ctggaagaag aagagacaac tgttcccgtg gcggacatta 2400 ctgatcacgc ttctgtaatt gaagagaatt ttgagaattt gcaacagggt agctcttcta 2460 actctacgcc aatcgttgtg gcaagagaga atctgtttgt gcgtaacgac atgggtccct 2520 cggcagtgac tagcgatgat tgttcgactg agggtgaact tagggaaaaa tcttgggcat 2580 ctttggcaga ggaagagagc gattcgtctt actacttgaa tactgcgatt atttcgggca 2640 aagtacagaa aagtgcacta ccaaaagctc cagatttttc gaagtatgcg acgtttcaag 2700 cgaaggcgaa acaggaggct ttgtggtact tgcaatgcaa gatcgtttct gatcgtacga 2760 cactgcggag catcatagac gatcatctga gaggtatgtt tcacaatgat acttgtgagt 2820 tgcctaagga ttcagctttt ttggaccaca cgactgataa cggtggtgct tggatgtatg 2880 ggaaaccatc cagatttggg cacagttacg gtgtgggttt ttcattgaat tcgaagcggg 2940 agattaccaa gtgtgagtta gtgaaactga tgtggaacta tgatggcagg gggcagataa 3000 gtcaaaaacc tgtgaacacg aaagcttttt cgtatctgtt gctgagtgaa ttgacattta 3060 tgatgaacga attgctcatt ttctgcaatt tgcagaaggt tattaagaag aaggaacgga 3120 caaaacacgc ccttattact ttacgggacg gtgttccagg ttgcggcaaa tctacttgga 3180 ttgttgagaa cgcaaacccc atgaaagata tggtgttgtc catgtgcaag gaagcgactg 3240 aagatttgaa agaaaaattt gcgaagagat taagatgtac ggaatcggcg ttgaggaggg 3300 tgcgaactgt ggattctttt ctgatgcatg attatgataa attcagggca gcgacggttc 3360 acttcgacga agcgctgatg gcgcatgcag gaatggttta tttctgtgcg gatattttgg 3420 gtgcaaaacg agtgctgtgc caaggagact cacaacagat tccttttata aatcgtgttg 3480 aatctatcac tctgaaatac gcaaaattgc agattgatga tacggagtat gtgagattga 3540 cttatcgatc gcctattgat gttgcacact atctcacgaa gaagtcttat tatagtggag 3600 gtagggtgct tacgaagaac acaactctga gatctatgaa cactgttggc cctcgcgatg 3660 cgaagcctat gacatctgtg cattgtgttc cctaccatcg tgatactcaa tatctaacgt 3720 tcactcagtc ggagaaagct gacctttata aggcactgcg aaacaggggg ccggtaaatg 3780 tgaataccgt gcacgagaca cagggtaaga cgtttgacga tgtaatcgtg gtgaggctga 3840 agacgacgga aaatgagatt tatcccgggg gaaggaaggc tcaaccatat gagattgtgg 3900 cgactacgag gcatagacgt tcgttggtgt actatactgc gattgaggac aggctgtttt 3960 ctgatatcaa tgacatgcgg gatgtgatgg aagacaagtt gatgaagaac cttagctctg 4020 agttggcgaa atgacggttt gggtcgaagt atgaatccat attgatttgc gatagggaag 4080 tgagggttcc cgacgtggga aattctgtta ttttgcagga tttttacgat agggttctac 4140 ctgcaaattc tacaatggat tcacacttcg acgggtatga agtggcaacg acagacatta 4200 ctatagaggt tgaaaattgt aaggttcacc cgcataagaa tgtgaaagtt tggcaagata 4260 aacggggtct gattcccgtt ttgcgcactg caatgccacc gaaaaggcag aatggcatgg 4320 tggaagcact tttggcgttg aagaaaagaa acatggctgc accgaagcta caagaagctg 4380 tgaatgaatt cgaggtaata gatcggacta ttagtcgcgc tagatcaatt tccttgaatg 4440 aagacatgat tgacgaatcg ttggtctcga cgcgtgagtc aaatatgcgt tggtgggaaa 4500 aacagtcaca tacagctagg cagcaattga aaagcgagta cagggtgctg catgagttgg 4560 acttatgcaa atattctcat aatattaaag gggatgaaaa accaaagaat gatttgacac 4620 ctcaacgtga atatggcgct ttgcagacag ttgtttatcc tgataagatt gttaatgcgc 4680 tgttcggacc tgttatgaag gagataaatg agcgtatagg aatggctttg aaacctcatg 4740 tggtttacaa ctcaaggatg aatgccgaag agttgaatcg gactgtcgaa tttctggatc 4800 cggaagatga gtatgacgca ttcgaaatag atttttcaaa attcgacaaa tcgaaaacat 4860 cattgcatat acgagctgta attgagttgt ataagttgtt tggtttggat gatatgttgt 4920 ccttactttg ggagaaatct caatgtcaga ccactgttat tgacagaaca aacggcatta 4980 ctgcttattt gttgtaccag cagaaatctg gtaattgtga cacttatggt tctaacacgt 5040 ggtcggccgc tctggctttg ttggagtcta tgccattgga gaaagctaaa tatatgattt 5100 ttggcgggga tgactctctg attttgtttc ctaaacaact ctgcattgag gatccgtgta 5160 gacgcttggc atctctgtgg aacttcgatt gtaagttgtt taacttcagg cataatatgt 5220 tttgtggtaa gtttttgttg aagatcggaa acaagtttaa attcgctcca gatccgatga 5280 agttgttgac gaagttggga cgcaaggata ttgcagatgg taagttactc tctgagattt 5340 ttgtttctat gggagataat tactgctctt accgggacta tcgtattttg gagcaacttg 5400 cggtggctgt gcaagaaagg tacaggacga atgaggaccc taccgcgatg ttgatcactt 5460 tgaagaagta tatttttgat tttaagctgt tggctagttt gtttaattat agtggtgagt 5520 ttgaagtgtg taaagtgggg aggaactttg agtggtgact cgctgttctc gttgtttttc 5580 ttctgtgtat tctattgtgt taaacgttgc gttacagcca tgggttcaaa ggatgtgaag 5640 ggtgactctt tcgaaagtgt gtataacaag attttggact tacaaactga gggagctgtt 5700 ggtgctgata gtcttaagac caatcgtcag cggagtttta atatcgagaa caaatacgtt 5760 gaaaaagctc tggttcaaca ggatattgcg acaaagatga gagaaggatg gaccacttgg 5820 actaagacaa ataaggagga aggaacgcct tataatatgt cttatagctg cgtactgctg 5880 aacgtcattc caaccgtacc gcgaggttat tctggcacag ttgaaatttc gttaattgat 5940 tcgggcctgt caccgcttga aaatgttatt ccggatcaga cgcagatgat ggaacttgga 6000 aatggaccgc atgtgatgtg ttttttcatg cactacggta taccgctcaa tgatgaaggc 6060 agggtgatta agctgtcatt taaaattgaa gcagaaatgg cttcaaagaa gatgagtgtt 6120 atgaatgttt actcctattg gacgcaaaaa caaggacatt tatctgttta cactgaacca 6180 cagcgatcga catgttcgaa acttttactt ggttacgaca aatcactgaa attgaagact 6240 agggatgacg tgcggcgttt tgttccacgg tcactagcaa ccaataatct tgagcaaagc 6300 gttcctaaaa tgcttcccaa cagcattaac attcttaaag agaacgtacc tcttttcaaa 6360 aaggagagcg tgttggattt gacggaacag gagagggaga agcagaaaaa gcttgaaacc 6420 ttgagaagtg ttaatgaggc acagagacgt aagagtgcac aggagatgca gaagagaaat 6480 gatgatttga ttagggcgaa tgtgcaaaag cagaaggcca agcaatctga aattgatgag 6540 aacaggaaaa atcactatga tgtctcgggt gtgaagtttg gttcagttgg aagtgactga 6600 gtctgttttt cttttatgta tttatatatg tattgtggtt ttgttgtgtg gtttattttt 6660 cgcttatatt gctatattgc atgtgtgcgt tgaaaatagt ctaacttgtc gggcagagac 6720 aagtcgttgc cgtcacgata gacggagccg ctgggattgc ggattataaa tcgaacaagc 6780 ctattagtac gggttgagta caaacgtggc catcacgata gatggttctg tttttcgaac 6840 agatgtaaat cgaagacgtc gtgcagtacg gtaaactgca catccatcct ttagtttcta 6900 ttgatgtaat tgaaaaaaga tcaatatttt acaatgatga ggagcgactg gtggtcgcgg 6960 tagctttgac acagctacta agaggggttc aaatcccccc ccgaaccgga gggtaatccg 7020 gccca 7025 //