ID AJ132430; SV 1; circular; genomic DNA; STD; VRL; 2722 BP. XX AC AJ132430; XX DT 17-MAY-2000 (Rel. 63, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Cotton leaf curl Multan virus-[Faisalabad3] complete genome XX KW C1 gene; C2 gene; C3 gene; C4 gene; coat protein; replicase; V1 gene; KW V2 gene. XX OS Cotton leaf curl Multan virus-[Faisalabad3] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2722 RA Briddon R.W.; RT ; RL Submitted (22-JAN-1999) to the INSDC. RL Briddon R.W., Virus Research, John Innes Centre, Colney Lane, Norwich, NR4 RL 7UH, UK. XX RN [2] RX DOI; 10.1023/A:1008151921937. RX PUBMED; 10766303. RA Briddon R.W., Mansoor S., Bedford I.D., Pinner M.S., Markham P.G.; RT "Clones of cotton leaf curl geminivirus induce symptoms atypical of cotton RT leaf curl disease"; RL Virus Genes 20(1):19-26(2000). XX DR MD5; d6549db8b4feabb6e9fede6fbee79625. XX FH Key Location/Qualifiers FH FT source 1..2722 FT /organism="Cotton leaf curl Multan virus-[Faisalabad3]" FT /host="Gossypium hirsutum (cotton)" FT /isolate="Pakistan" FT /mol_type="genomic DNA" FT /tissue_type="leaf" FT /db_xref="taxon:223256" FT CDS 117..446 FT /gene="v2" FT /product="V2 protein" FT /db_xref="GOA:Q9IWB7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9IWB7" FT /protein_id="CAB91850.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT IGILRSRNYVEASCRYSHFYARVESTPACELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ FT EAQNV" FT CDS 277..1047 FT /gene="v1" FT /product="coat protein" FT /db_xref="GOA:Q9IWB6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q9IWB6" FT /protein_id="CAB91851.1" FT /translation="MSKRAADIVISTPASKVRRRVNFGSPYTSRAAAPIVRVTKQQAWT FT NRLMNRKPRMYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT IGKRFCVKSDYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKHENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVPN" FT CDS complement(1050..1454) FT /gene="c3" FT /product="C3 protein" FT /db_xref="GOA:Q9IWB5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q9IWB5" FT /protein_id="CAB91852.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKTISHVNRPFTTNMDI FT LTFRIQFNYNTRKALGLHKCFLTFRIWTTLQPQTGLFLRVFKTQVLKYLNNLGVISINL FT VIKAVEHVLYNVIQQTMYVDQYSEIKFKLH" FT CDS complement(1147..1599) FT /gene="c2" FT /product="C2 protein" FT /db_xref="GOA:Q9IWB4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q9IWB4" FT /protein_id="CAB91853.1" FT /translation="MRSSSHLIDPCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGGSKSPLFQDHQPRQPSIHDEYGHTHVQDPVQLQH FT SESFGTAQVFSNLPNLDDLTASDWSFLKGIQNPSPQISEQSRCNFN" FT CDS complement(1496..2581) FT /gene="c1" FT /product="replicase" FT /db_xref="GOA:Q9IWB3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9IWB3" FT /protein_id="CAB91854.1" FT /translation="MPRALKTNAKNYFLTYPKCSLTKEETLSQLQNLHTPVSKKYIKIC FT RELHQNGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSRSDVKAYIDK FT DGDTLEWGEFQIDGRSARGGQQTADDAYAAALNAGRKSEVLRVIKELAPKDFVQQFHNL FT NANLDRIFREPPAPNISPFSRSSLDQVPEELEVWAIDNVVDPAARPLRPRSIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDEVDPHFLKHFKEFMGAQRDWQS FT NTKYGKPVQIKGGIPTIFLCNPGPNCSYKEFLDEEKNTALKNWAVKNAIFITLDRPLYS FT GTNQSTAQGSEEAQQEEESRS" FT CDS complement(2146..2430) FT /gene="c4" FT /product="C4 protein" FT /db_xref="GOA:Q9IWB2" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q9IWB2" FT /protein_id="CAB91855.1" FT /translation="MGNLIFTCSSSSRASTNARITDSSTWYPQPGQHISIRTFRELNQG FT QMSRPTSTRTGTLSNGESFRSMEDQQEEDNRQQTTLTPQHLTQAESQRF" XX SQ Sequence 2722 BP; 687 A; 548 C; 649 G; 838 T; 0 other; accggatggc cgcgcgattt tttatgtggg cccccgatgt atgagattgc tccctcaaag 60 ctaaataacg ctcccgcaca ctataagtac ttgcgcacta agtttcaaat tcaaacatgt 120 gggatccact attaaacgaa ttccctgata cggttcacgg gtttcggtgt atgctttctg 180 tgaaatattt gcaacttttg tcgcaggatt attcaccgga tacgcttggg tacgagttaa 240 tacgggattt aattggaatt ttacgctccc gtaattatgt cgaagcgagc tgccgatata 300 gtcatttcta cgcccgcgtc gaaagtacgc cggcgtgtga acttcggcag cccatacacc 360 agccgtgctg ctgcccccat tgtccgcgtc acaaaacaac aggcatggac aaacaggctt 420 atgaacagga agcccagaat gtataggatg tacagaagtc cggatgttcc aaagggttgt 480 gaaggcccat gtaaggtaca atcttttgag tcgagacatg atgtcgttca tattggtaag 540 gtaatgtgta tttctgatgt tactcgtggt gtcggtttga cccatcgtat tggtaaacgt 600 ttttgtgtca agtcagatta tgttttaggt aagatatgga tggatgaaaa tataaagacc 660 aagaatcaca cgaattcggt gatgttcttt ttagtccgcg atcgacgtcc tgttgacaaa 720 cctcaggatt ttggtgaggt atttaatatg tttgacaatg aacccagtac agcgactgtg 780 aagaatagtc atagggaccg ttaccaggtg ttgaggaaat ggcatgcaac cgttacgggt 840 ggtcaatatg catcgaagga acaggctttg gtcaagaagt ttgtcagagt taacaattat 900 gttgtttaca atcaacagga agcaggaaaa cacgagaatc atacggaaaa tgcgttaatg 960 ctttatatgg cttgtactca cgctagcaac cctgtttatg ctacgttgaa gattaggata 1020 tatttttatg actctgtacc gaattgatat taatgaagtt tgaattttat ttctgaatat 1080 tgatctacat acatagtttg ttggattaca ttgtacaata catgttctac agctttaata 1140 actaaattaa ttgaaattac accgagattg ttcagatatt tgaggacttg ggttttgaat 1200 acccttaaga aaagaccagt ctgaggctgt aaggtcgtcc agattcggaa ggttagaaaa 1260 cacttgtgca gtcccaaagc tttccgagtg ttgtagttga actggatcct gaacgtgagt 1320 atgtccatat tcgtcgtgaa tggacggttg acgtggctga tggtcttgaa ataaagggga 1380 tttggaacct cccagatata tgcgccattc cctgcttgag ctgcagtgat gggttcccct 1440 gtgcgtgaat ccatggttgt ggcagttgat tgacagataa taagaacacc cgcattcaag 1500 atctactctc ctcctcctgt tgcgcctctt cgcttccctg tgctgtactt tgattggtac 1560 ctgagtacag gggtctatca agtgtgatga agatcgcatt ctttactgcc cagttcttta 1620 gtgcggtgtt cttttcctcg tctaggaatt ctttataact gcaatttgga ccaggattgc 1680 ataggaagat tgttggtatc ccgcctttaa tttgaactgg cttcccgtac tttgtgttgg 1740 attgccagtc cctttgggcc cccatgaact ctttaaagtg tttgaggaaa tgcgggtcga 1800 cctcatcaat gacgttatac caggcgtcgt tactgtagac cttgggactc aggtccagat 1860 gtccacacaa atagttatgt ggtcccagtg atctagccca catcgtcttc cccgttcgac 1920 tatctccttc aattactata cttcgaggtc taaggggccg cgcagcggga tccacaacgt 1980 tatcgatggc ccaaacttca agttcttctg gaacttgatc caaagaagaa cgagaaaaag 2040 gagaaatatt gggagccggt ggctcccgaa atattctgtc tagatttgca tttaaattat 2100 gaaattgttg tacaaaatct ttaggagcta gttccttaat gactcttaga acctctgact 2160 ttctgcctgc gttaagtgct gcggcgtaag cgtcgtctgc tgtctgttgt cctcctcttg 2220 ctgatcttcc atcgatctga aactctcccc attcgagagt gtccccgtcc ttgtcgatgt 2280 aggccttgac atctgacctt gatttagctc cctgaatgtt cggatggaaa tgtgctgacc 2340 tggttgggga taccaggtcg aagaatctgt tattcgtgca ttggtacttg ccctcgaact 2400 ggatgagcac gtgaagatga ggttccccat tttggtgaag ctctctgcag atcttgatgt 2460 attttttgct tactggggta tgtaggtttt gtaattggga gagggtttct tctttagtta 2520 gagagcattt gggataagtg aggaagtagt ttttggcgtt tgtttttaaa gcacgtggca 2580 ttttggcaat cggtgtacac tctaattctc tggcaattgg tgtaacgggg tgcaatatat 2640 aggtgtaccc caaatggata tcgtaatggg agaaatcatt tcgagatcct cacgctccaa 2700 aagcggccat ccgtataata tt 2722 //