ID   AJ132414; SV 1; linear; genomic RNA; STD; VRL; 1161 BP.
XX
AC   AJ132414;
XX
DT   22-JAN-1999 (Rel. 58, Created)
DT   02-MAR-2000 (Rel. 62, Last updated, Version 2)
XX
DE   Cowpea aphid-borne mosaic virus gene encoding nuclear inclusion protein b
DE   and coat protein, partial, isolate Ibadan
XX
KW   coat protein; nuclear inclusion protein b.
XX
OS   Cowpea aphid-borne mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1161
RA   van Boxtel J.H.J.;
RT   ;
RL   Submitted (20-JAN-1999) to the INSDC.
RL   Van Boxtel J.H.J., Virus Research, John Innes Centre, Norwich Research
RL   Park, Norwich, NR4 7UH, UK.
XX
RN   [3]
RX   DOI; 10.1023/A:1008164324663.
RX   PUBMED; 10766309.
RA   van Boxtel J.H.J., Thomas C.L., Maule A.J.;
RT   "Phylogenetic analysis of two potyvirus pathogens of commercial cowpea
RT   lines: implications for obtaining pathogen-derived resistance";
RL   Virus Genes 20(1):71-77(2000).
XX
DR   MD5; e3e7185a1e536a5511320993be6336a9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1161
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /host="cowpea"
FT                   /isolate="Ibadan"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12199"
FT   CDS             <1..927
FT                   /codon_start=1
FT                   /product="polypeptide"
FT                   /note="3'NIb + CP"
FT                   /db_xref="GOA:Q9YJW1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YJW1"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAA10665.1"
FT                   /translation="RQCAGIRLEKELQRYLQGILLDYDDCESEDVMLQSGRRQEELDAG
FT                   QDKDKGKEGTEQSTQQKTKKKGINETERDVAASSSGQLVPRLQKISKKMNLPVVAGKVI
FT                   LDLNHLIEYKPAQIDLYNTRASRAQFSKWYAAIKEEYELDDDKMAVIMNGFMVWCIENG
FT                   TSPDVNGVWTMMDGDEQVEFPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSEGFYMP
FT                   RYGLLRNLRDKSLARYAFDFYEVTSKTSDRAREAIAQMKAAALSNVNTRMFGLDGNVAT
FT                   TSENTERHTATDVNQNMHSLLGMRHGQ"
FT   mat_peptide     <1..102
FT                   /product="nuclear inclusion protein b"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT   mat_peptide     103..924
FT                   /product="coat protein"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT   3'UTR           928..1156
XX
SQ   Sequence 1161 BP; 360 A; 228 C; 297 G; 276 T; 0 other;
     cgccagtgtg ctggaattcg gcttgagaag gagctgcaga ggtatcttca aggcattctc        60
     ttggactacg atgattgtga gtcggaggat gtcatgcttc aatccggaag gaggcaagaa       120
     gagttggatg caggccagga taaagataag ggcaaggaag gtacagaaca atccacacaa       180
     cagaagacaa agaagaaagg gatcaatgaa acagaaagag acgtcgcagc tagttcttca       240
     gggcaattgg tgccacgtct acaaaagatt agcaaaaaga tgaatctacc tgttgtcgct       300
     ggcaaggtta tactcgactt gaatcattta atagagtata agccagcgca aattgaccta       360
     tacaacacca gagcctcaag agctcagttc agcaagtggt acgcagctat caaagaagag       420
     tatgaactgg atgacgacaa gatggctgtt atcatgaatg gttttatggt ctggtgcatt       480
     gaaaacggaa cttcacctga tgtgaatggg gtatggacca tgatggatgg agatgaacaa       540
     gtggaattcc cgcttaaacc catcgtagaa aatgcaaaac ccacactcag acaaataatg       600
     caccatttct ctgacgcagc tgaagcgtac atagagatga ggaattccga agggttctac       660
     atgcccaggt atggactgct taggaatttg agggacaaga gtttagctcg ctatgctttt       720
     gacttctacg aagtgacctc taaaacttct gatagagcac gagaagcaat agcacaaatg       780
     aaagcagcgg ccttgtcgaa cgttaacacc aggatgtttg gcctggatgg aaacgttgcc       840
     acaactagtg agaacactga gaggcacact gcaactgatg tgaatcagaa catgcactcc       900
     cttcttggga tgaggcatgg gcagtaaagg cttgggttca gccctcgtca cagttatcgt       960
     ctcacgtcct tagctaatgg ttggttttag taaatagtac gcatatatcc agtaagacta      1020
     tatatgttag tgtgggcgtc ccaccagtac gttatgttac tttaattgaa cttagcggag      1080
     aggccatacc ccggttggag tgctcagagt ggttttacca cgcgtagtta ccgagatttg      1140
     tgtatgaaaa ctctctaaaa a                                                1161
//