ID AJ132269; SV 1; linear; genomic RNA; STD; VRL; 3582 BP. XX AC AJ132269; XX DT 28-JAN-1999 (Rel. 58, Created) DT 28-JAN-2003 (Rel. 74, Last updated, Version 5) XX DE Barley yellow mosaic virus, Chinese (Yancheng) genomic segment RNA2 DE complete sequence XX KW P1 protein; P2 protein; polyprotein. XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-3582 RA Adams M.J.; RT ; RL Submitted (27-JAN-1999) to the INSDC. RL Adams M.J., Crop and Disease Management, IACR-Rothamsted, Harpenden, Herts, RL AL5 2JQ, UK. XX RN [2] RA Chen J., Shi N., Chen J., Adams M.J.; RT "Molecular analysis of barley yellow mosaic virus isolates from China"; RL Unpublished. XX RN [3] RX DOI; 10.1016/S0168-1702(99)00076-3. RX PUBMED; 10500279. RA Chen J., Shi N., Chen Y., Diao A., Chen D., Wilson M.A., Antoniw J.F., RA Adams M.J.; RT "Molecular analysis of barley yellow mosaic virus isolates from China"; RL Virus Res. 64(1):13-21(1999). XX DR MD5; 2052d424fa0f14561ad221eec027a156. XX FH Key Location/Qualifiers FH FT source 1..3582 FT /organism="Barley yellow mosaic virus" FT /segment="RNA2" FT /host="barley" FT /isolate="Yancheng" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12465" FT 5'UTR 1..154 FT CDS 155..2827 FT /product="polyprotein" FT /db_xref="GOA:Q9YJW2" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR036417" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/Swiss-Prot:Q9YJW2" FT /protein_id="CAA10638.1" FT /translation="MSASSSRLLFDCGSLDWPNKSLFGDPTTRDVMNEHISSTWNAVIR FT RHMLAPNANAETILGRDGLPSAQFDAYGAMLPSFIQALNAPTTRLRISAPLSTAESILC FT ADASHAPWLYMANSVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITFENARGF FT SRFLEQLPDILGAYPTLAAIYKTMLFAIRLFPEVLQAPIPIIAKRPGVLQFHVSDARGL FT PPSWFPMKCGSVASFVALITNNLNSDLLNGIVGSNGDGEHYTNWNSGHDHWIVNRFITV FT KDLHSSLKSALEVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAYFQGAESVYLLLSC FT ERVGNELVAVQDALQEPLANYSGLDLRALIINLGGLPSRHSDICYTRNIFENDNHLVWN FT FEFYRIASITKNAQIDRDVLSSSMANLFSDFVSESSNGQYRVKEPRPVVQYRVEHDEPV FT ASSAPSAWWQVLIGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDSPPP FT PGDSPSRPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEVVSLIARGNLRE FT LAGAIPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPATIQSLRTL FT ELQLEARGLRFNEAGTPANLIQRGVNSSVGRALVRLTQSALLATGENFRTRMATTLERI FT AAERLNTLTAYDQRVIEMTTELLAAIKPVLEVERSELTPHLANAEALLQVYNNLFSTDY FT VSASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQR FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGMPDVATPMPNPFRAFSG FT RGHSLTTTRSGGLFRRPRV" FT mat_peptide 155..919 FT /product="P1 protein" FT mat_peptide 920..2824 FT /product="P2 protein" FT 3'UTR 2828..3582 XX SQ Sequence 3582 BP; 922 A; 918 C; 778 G; 964 T; 0 other; aaaataaaac aaccctaaac caaacaaaac aaaacaaaac aaacacaaac atcacacgct 60 ccccaagctc acaatacttg tagagtgatt tctgtcatcc tactgtttgc aagctttcca 120 acaaatcaac ccgctcgctt tcaaaccctc catcatgtct gcttctagtt cacgcttact 180 cttcgactgt ggcagtcttg actggccaaa taagagctta tttggcgatc ccacaacgcg 240 agatgtcatg aacgaacaca tttccagcac gtggaatgcg gttattagaa ggcacatgtt 300 ggcgcccaat gccaacgccg agactatatt gggccgtgat ggtttgccat ctgctcaatt 360 tgacgcgtat ggagccatgc tacccagctt cattcaagct ctaaatgcac ctacaacgcg 420 tctccgaatc agcgcaccgc tgtccaccgc tgagtccatc ttgtgcgctg atgcatccca 480 cgccccttgg ttgtacatgg caaacagtgt gtgcgcatac gaagcaactc atctgcagcc 540 tgtacaaact ttcatcgctt tcaacttcgc gcatggctat tgttacctca gtctcttcat 600 accactaagc tttcgcatta ccttcgagaa tgctcgaggt ttcagtcggt ttctcgagca 660 gcttcctgat attttaggtg cgtatccaac attggctgca atatataaaa caatgctatt 720 tgctattagg cttttcccag aggtgctaca agctccaatt cccatcatcg caaaaaggcc 780 tggcgtactc caattccacg ttagtgatgc cagagggcta ccaccctcat ggttccccat 840 gaagtgtggc agcgtagcat ctttcgtagc actcatcacc aacaacctga acagcgattt 900 gcttaatgga attgttggtt caaatggtga tggcgagcac tacacaaatt ggaactctgg 960 acatgatcac tggattgtga atcgattcat aacagtcaaa gatttgcaca gcagcttaaa 1020 gtcagctctg gaggttgatt tggacacaga gggcgggcga aatgccgttc tcgatttgct 1080 tctagatctt ggggttacta atctcgttcg aagagagaaa cgcttcccag catactttca 1140 aggagctgaa agcgtatatc tacttctatc gtgcgagaga gttgggaacg agttagtagc 1200 cgtgcaagat gccctgcagg aaccattggc taactattct ggcttagatt tgagagctct 1260 catcatcaat cttggcggtt taccaagcag acactctgat atttgctaca cacgcaacat 1320 ttttgaaaac gataatcatc tggtttggaa ctttgagttc taccggatag cctcaatcac 1380 gaagaatgca caaattgaca gagacgtgct gagctcatcc atggcgaact tgtttagcga 1440 ctttgtttca gagtcgtcaa atggtcagta cagagtcaaa gaaccaagac ctgttgttca 1500 gtacagggtt gagcacgatg aaccagttgc tagtagtgcc ccatctgctt ggtggcaagt 1560 tcttattggc atcaccactg cgatccttgg cgcaataata ttctttctct ggaggtgttt 1620 cttacgtgct aagcgtgtga aattccaggc aaaggactcc ttcccatggt ttaccacatc 1680 tggtgatgat gactcaccgc ctccccccgg cgattccccg tcgcgccctc ctggacgcag 1740 cccagatcga gttcttccgc gcacagttgt tcgagatctt agcttcaatg acgatgatga 1800 cttacacagc gttgatctca acgaagctgg atcgcgtttt ggggaggttg tctctttgat 1860 tgcaagggga aatcttcgcg agttagctgg tgcaattcct gaatctctca gcaacctaac 1920 cctccttcaa acgagtgcaa gtgggtcagg tttttatact atggtggctt tgtaccttgc 1980 cactttgggg gatgccatca ctgcatttca tgagcacaat gatgcctcac ctgccacaat 2040 tcaatcactg cgaacgctcg aacttcagct tgaagcccgt gggttgcgtt tcaatgaagc 2100 tggtacaccc gcaaatctta ttcagagggg cgttaattcc tctgttggca gagcacttgt 2160 gcgactgaca cagagtgctc tcttagctac tggtgagaac tttcggacac gcatggcaac 2220 cacacttgaa agaattgctg ctgagcgtct taacacatta accgcttatg atcagcgagt 2280 tattgaaatg acaactgagc tcctagcagc gattaaaccg gttcttgagg ttgagcgcag 2340 tgaactcact ccacatctgg caaacgccga ggctttgctt caagtttaca ataacctctt 2400 cagcaccgat tacgtttcag catcgctgct cgctcttaga cgcgagatga ttctcaggag 2460 tgctgaaggg cgtgttggag aacagcccac tagtgcttct gacgctgcta atgaggagtt 2520 ggttcaacgt tccatgacaa aattggataa ggaaatcgag ttgttccagg cacaaattga 2580 tagccagcgc cgcgccgtca ccataactga agcatccaat ctcagagaaa atatattgca 2640 gccaatcaac actgtcgcaa atattgctat ggctggagct tttctgcgtg ggggcgcgcg 2700 tcatcgcatg ccaggaatgc cagacgtagc tacgcccatg cccaaccctt ttcgagcttt 2760 ctcagggagg ggacattcac tcacgacaac tcgaagtggc ggtcttttcc ggcgccctcg 2820 agtctagaat tctcatcaca gcagcattta ctttccatcg ccttagaata gtttagatca 2880 acatcatcca tttctctatc ctttcgccat ctgcacacca ttgccattaa tatggtagag 2940 ttagcaattc atcccttgct acgctcaaaa tctccatctt tagaccacct gcaaacacac 3000 aaaataccaa aaataccatt tatcattctg tctcaaacgc cagcatttta aattacccgc 3060 aattgcatta tcgtttcgcc atcaaagtat ggttcgtttc atcaacatct gctcgcacga 3120 ttgggtgtat ggggccagtg ttgtttcggg tatggaattc aaatggtaag aaatttattc 3180 ttctcaccat gagtttttca ggggataagt tcggtgctac agctagcggc tgtatcctta 3240 acgatgcccc acaccacgaa acaccattga ttcttcggaa ttagcctttc aaatatccca 3300 actgcaatga gcacgatagc attgcatctc cactcaaggt ccggttagag tccctggcag 3360 gtgtgggcta caggagcatg ggaatgcttc tctgtcacca tctgtcgtct gcggcctcta 3420 tctagcacta cgagtggagc cacgtcttta aatccccagc atgtttactt tatgttctgc 3480 atagaaaacg tcacatctgt gatacaaaaa catgcaacac gtgcccatca tcggtcgcgg 3540 gttgtagtct gatgaacaac aactttgtac acaggaaatg tg 3582 //