Dbfetch

Dbfetch

ID   AJ010757; SV 1; linear; mRNA; STD; VRL; 1140 BP.
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AC   AJ010757;
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DT   01-OCT-1998 (Rel. 57, Created)
DT   02-MAR-2000 (Rel. 62, Last updated, Version 2)
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DE   Sweet potato chlorotic stunt virus, mRNA for coat protein, isolate S1EA-13b
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KW   coat protein.
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OS   Sweet potato chlorotic stunt virus
OC   Viruses; Riboviria; Closteroviridae; Crinivirus.
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RN   [1]
RP   1-1140
RA   Fenby N.S.;
RT   ;
RL   Submitted (28-AUG-1998) to the INSDC.
RL   Fenby N.S., Department of Biology, Bristol University, Woodland Road,
RL   Bristol, BS8 1UG, U.K.
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RN   [2]
RX   DOI; 10.1046/j.1365-3059.1999.00402.x.
RX   AGRICOLA; IND22041176.
RA   Alicai T., Fenby N.S., Gibson R.W., Adipala E., Vetten J.H., Foster G.D.,
RA   Seal S.;
RT   "Occurrence of two serotypes of sweet potato chlorotic stunt virus in East
RT   Africa and their associated differences in coat protein and HSP70 homologue
RT   gene sequences";
RL   Plant Pathol. 48(6):718-726(1999).
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DR   MD5; 7d3d9e4bafc7ec2909c6c7bb7a7d8cc1.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1140
FT                   /organism="Sweet potato chlorotic stunt virus"
FT                   /isolate="S1EA-13b"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:81931"
FT   CDS             200..973
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9YIY2"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YIY2"
FT                   /protein_id="CAA09348.1"
FT                   /translation="MDTEKVNDDKNFDSDSDVGFGDRNVNDNLRRRSDTIDNENVNNVG
FT                   RRDMELTSGILTSEQLALARLGKIQVYSNSPDIMSKSQEDEFKRHMESFVRQITGETTL
FT                   SSEIFASFYASLFQAWANQSTSEKNASNANLENVFMVDGKEYSWKTHSFINHMQSNMPD
FT                   VKNAARKWARAHANDYKVLVGMGIVKPDYHLQAKQGVLPEYWHLATDFMRGNDMATTAD
FT                   GLAATLMMKRNALCNKDNKNSIYNVTQLTGTGLHC"
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SQ   Sequence 1140 BP; 375 A; 190 C; 252 G; 323 T; 0 other;
     cgtctagatt gttagaaata aaaagaactg gagtcggtct cgtgaatttg ttgctaaatc        60
     tgattaatga gaattttatc tacttcgact caaataggtc taagtgtggg tttgaaaaag       120
     aggatcacgt tcttattttg caaataattc ctttattgcg tatttgaggt ttgttcttta       180
     tattatcata acttaacaga tggatactga aaaagtaaac gatgacaaga actttgactc       240
     tgactccgat gtaggtttcg gggacaggaa tgtgaacgat aatctacgaa gacgttccga       300
     tacgattgac aacgaaaacg tcaacaatgt gggaagaaga gacatggagt taaccagtgg       360
     tatattaaca tctgagcaac tggctcttgc gaggttggga aaaatacagg tttattctaa       420
     ctcaccagac attatgtcta agagtcaaga agatgaattc aagagacata tggagagttt       480
     tgtgaggcaa attacagggg aaactacatt atcttctgag atttttgcaa gtttctacgc       540
     atctctattc caagcttggg caaaccaaag tacttcggaa aagaacgcgt cgaatgcaaa       600
     tctcgagaat gtgttcatgg ttgatggtaa ggagtacagt tggaaaactc atagtttcat       660
     caatcacatg caatccaata tgcccgacgt gaagaatgct gctaggaaat gggccagggc       720
     tcacgcgaat gattataagg ttcttgttgg tatgggtata gtaaaacctg actatcattt       780
     gcaagctaaa caaggtgtat taccggagta ttggcatctt gcaaccgact tcatgagagg       840
     taatgacatg gcgacgactg cagatggatt agcagcaaca ctgatgatga aaaggaacgc       900
     tctttgtaac aaggacaaca agaattctat ttataacgta actcaattga ccggtactgg       960
     tcttcactgt tgagtatgga tatattagaa ctagaagtag ataacattat atcgacaaat      1020
     tatcccgatg atgaatccga aatagtgact agagctgtgg gatgtaagtt caatcaagat      1080
     tattctctac cttacaaaga tagagaacaa gtcgacttct ctatacctta cacttccgcg      1140
//