ID AJ007933; SV 1; linear; genomic RNA; STD; VRL; 3391 BP. XX AC AJ007933; XX DT 17-JUL-1998 (Rel. 56, Created) DT 02-MAR-2000 (Rel. 62, Last updated, Version 3) XX DE cucumber mosaic virus RNA encoding helicase, clone RNA1 XX KW 1A gene; helicase. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3391 RA Szilassy D.; RT ; RL Submitted (15-JUL-1998) to the INSDC. RL Szilassy D., Plant Virology, Agricultural Biotechnology Center, POB. 411., RL Godollo, H-2100, HUNGARY. XX RN [2] RX DOI; 10.1023/A:1008016202128. RX PUBMED; 10456790. RA Szilassy D., Salanki K., Balazs E.; RT "Molecular evidence for the existence of two distinct subgroups in cucumber RT mosaic cucumovirus"; RL Virus Genes 18(3):221-227(1999). XX DR MD5; 6cd46a392c916dc483589aab286df04b. DR EuropePMC; PMC136033; 11884564. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3391 FT /organism="Cucumber mosaic virus" FT /strain="Trk7" FT /mol_type="genomic RNA" FT /clone="RNA1" FT /db_xref="taxon:12305" FT CDS 96..3074 FT /gene="1A gene" FT /product="helicase" FT /db_xref="GOA:O90706" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:O90706" FT /protein_id="CAA07769.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQHQHQRRGL FT KVYIRNVLDVKDSEVIRTRYGGKYDLHLTQQELAPHGLAGALRLCETLDCLDFFPRSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHTERLMSMRKVILNDPQQFDGRQ FT PDFCTKSAAECKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GFIPELKCQWRKIKSAFSEEEDATCSAAKLNSSVFSRVRNGKTLIAFDFVEESTMSYVH FT DWDNIKSFMTDQTYSFNGMTYGIERCVIYAGVMTYKIVGVPGMCPPELIRHCIWFPSMK FT DYVGLKIPASDDLVKWKTVRILLSTLRETEEIAMRCYNDKKNWMDLFKIILGVLSSKSS FT TIVINGMSMQSGERIDLNDYHYIGFAILLHTKLKYEQLGKMYDMWNASFIWKWFASMSR FT PFRVFFSTAVKTLFPTLRPREEKEFLVKLSTFVTFNEECSFDGGKEWDVISSAAFVAAQ FT AVADGTILAKEKAEKLADRLAVPVEEVSAIPEVSPTPVDQGTACGLETETSELDSLSAQ FT TRSPITRIAERATAMLEYSAYEKQLHDTTVSNLQRIWCVAGGDNKRNSLESNLKFVFDT FT YFSVDALVNVHFPTGRWMHPVPEGVVYSVGYNEKGLGPKLDSELYIVNGDCVISNSHDL FT FSITKSLLAPTGTISQVDGVAGCGKTTAIKSMFNPSTDIIVTANKKSAQDVRYALFKST FT DSKEACAFVRTADSILLNDCPTVSRVLVDEVVLLHFGQLCAVMSKLHAVRALCFGDSEQ FT IAFSSRDASFDMRFSKLIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTRTKYSRWV FT SQSKVRKSVTSRAVASVSLVELDPTRFYITMTQADKASLITRAKELNLPKAFYTDRIKT FT VHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVAVTRHKVTFRYEYCGVLGGDLIATCI FT PLV" XX SQ Sequence 3391 BP; 856 A; 734 C; 787 G; 1014 T; 0 other; gttttattta caagagcgta cggttcaacc cctgcctcct ctgtaaaact accctttgaa 60 ttcttcttct cgacttttct tagtttaaaa ttcctatggc aacgtcctca ttcaacatca 120 atgaattggt agcctcccac ggcgataaag gactacttgc gacagccctc gttgataaga 180 cagctcatga gcagctggag gagcaacatc aacatcaacg tagaggcctt aaggtctaca 240 tccgtaatgt tttggatgta aaggactccg aagtcattcg gactcggtat ggtggtaagt 300 acgacctcca tctcacccag caggaattag ctccccatgg cctcgctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactttt tccctcgttc aggtctgcgg caggacctcg 420 tcttagactt cggaggaagt tgggtcacac actatcttcg cggacacaac gtacattgct 480 gctccccatg tttgggtatt cgtgacaaga tgcgtcacac tgaaagattg atgagcatgc 540 gtaaggtcat tttaaacgat ccacaacagt ttgatggccg ccagccggac ttttgcacta 600 agtctgcagc tgaatgcaaa gttcaagccc actttgctat ttctatacac ggaggatatg 660 atatgggctt tagaggttta tgtgaggcaa tgaacgctca cggaactacg attttgaaag 720 ggacgatgat gttcgacggt gctatgatgt ttgacgacca aggctttatt cctgaactta 780 aatgtcagtg gcgaaaaatt aaatccgcct tttctgagga ggaggatgcc acttgttcag 840 cagctaaact caattctagt gttttttcac gcgtgcgaaa tgggaaaacc ttaatcgcat 900 ttgacttcgt tgaggaatcc acgatgtctt atgttcacga ttgggataat ataaaatcgt 960 ttatgacaga tcaaacgtac tctttcaatg gtatgaccta tggaattgag cgttgtgtta 1020 tttacgctgg cgtgatgact tacaagattg ttggcgtgcc tggtatgtgt ccgcccgaac 1080 tcattcgaca ttgtatctgg ttcccctcta tgaaggacta tgttggtctt aagattcccg 1140 cgtctgatga cttggttaaa tggaaaacag tccgtatttt actgtcaacg ttacgtgaga 1200 ctgaagaaat agctatgcgt tgttataacg acaagaagaa ttggatggat ctattcaaga 1260 ttattctcgg tgttttatca tcgaagtcct ccacgatcgt tatcaatggt atgtctatgc 1320 aatccggtga acgtattgat ctcaatgatt atcattacat cggttttgct atccttctcc 1380 acacgaaatt aaaatacgaa caacttggaa aaatgtacga tatgtggaat gcttccttca 1440 tttggaagtg gtttgcgtct atgtctagac cattccgtgt tttcttttcc actgctgtta 1500 agactttgtt tccgactttg agaccgcgcg aggaaaagga gtttttggtc aaactttcca 1560 ctttcgtcac ctttaacgag gagtgctctt ttgacggagg gaaagaatgg gacgtgatat 1620 catcagcggc tttcgtagcc gctcaggctg ttgcagatgg tactattctg gccaaggaga 1680 aagctgagaa attagctgat cgtctggccg tgcctgttga agaagtatct gctattcctg 1740 aggtgtctcc tacacctgtt gatcagggca ctgcttgtgg actggaaaca gaaacatcgg 1800 aactggattc tctgtctgcc caaacacgtt cccccatcac acggatcgct gaaagagcga 1860 ccgctatgct tgaatattca gcttatgaga aacaattgca cgataccacc gtttcaaatc 1920 ttcaacgaat ttggtgcgtg gcaggtggcg acaacaagag aaactcttta gagagtaatt 1980 tgaaatttgt gtttgacact tatttttctg ttgacgccct agtgaatgtt cactttccta 2040 ctgggagatg gatgcaccct gtgcctgagg gcgtggtata ctctgttggt tataatgaga 2100 agggtcttgg tcctaaactt gatagtgagt tgtacatagt taatggtgat tgtgtgattt 2160 cgaacagtca tgatttgttt tcaatcacta aatctttgtt agctcccacc ggaaccatca 2220 gccaagtcga tggtgtagct gggtgcggaa aaaccactgc tataaaatcc atgtttaatc 2280 cttccacaga tataattgtc acagccaaca agaaatctgc tcaagatgtg cgttacgcgc 2340 tgtttaaatc tactgactcc aaagaagctt gtgcttttgt taggaccgct gattccatat 2400 tactcaatga ttgccctacg gtgtctcgag tgcttgtgga tgaagttgtt ttgttgcact 2460 ttggtcagtt gtgcgctgtc atgtcgaaac ttcatgctgt cagagctttg tgtttcggag 2520 actccgaaca gatagccttc tcctctcgtg acgcttcgtt cgacatgcgt ttctctaagc 2580 ttattccgga tgagaccagt gatgcggaca caactttccg tagtccacaa gatgtagtac 2640 cgcttgtgcg tttgatggct acgaaggctc taccgaaagg gacccgtacg aaatactcaa 2700 gatgggtgtc ccaatctaaa gtgaggaagt ctgttacttc gcgtgctgtt gctagtgtat 2760 ctctagttga actggacccc accaggttct atattacgat gacgcaagct gataaagcct 2820 cactaatcac tagagctaag gaactgaacc tacccaaggc attctacact gataggataa 2880 agactgtcca tgaatctcaa ggtatttcag aagatcatgt gaccctggtt aggttgaaga 2940 gtactaaatg tgacctgttc aagaaatttt cttactgctt agttgcagtt actcgacaca 3000 aggtcacctt ccgctatgag tactgtggtg tgttaggtgg ggacctaatc gctacttgta 3060 ttccgttagt ctgatcgcgg aaggtccgaa gacgttaaac tacactctct ttattgcgag 3120 tgctgagttg gtagttttgc tttaaactat ctgaagtcgc taaatccagt attggttgcg 3180 aacgggttgt ccatccagct tacggctaaa atggtcagtc atgccctaaa ggcatgccga 3240 catcttacaa ggttgtcgag gtacccttga aatcatctcc tagatttctt cggaagggct 3300 tcgtgagaag ctcgtgcacg gtaatacact gatgttacca agagtgcggg tatcgcctgt 3360 ggttttccac aggttctcca taaggagacc a 3391 //