ID AJ006500; SV 1; linear; genomic RNA; STD; VRL; 2868 BP. XX AC AJ006500; XX DT 04-SEP-1998 (Rel. 56, Created) DT 14-MAY-1999 (Rel. 59, Last updated, Version 2) XX DE Pea early browning virus (E116 isolate) RNA2 genome encoding coat protein DE and 29 kDa protein XX KW 12 kDa protein; 29kDa protein; coat protein; cysteine-rich protein; KW pseudogene. XX OS Pea early-browning virus OC Viruses; Riboviria; Virgaviridae; Tobravirus. XX RN [1] RP 1-2868 RA MacFarlane S.A.; RT ; RL Submitted (29-MAY-1998) to the INSDC. RL MacFarlane S.A., Virology, Scottish Crop Research Institute, Invergowrie, RL Dundee DD2 5DA, SCOTLAND. XX RN [2] RX DOI; 10.1016/S0168-1702(99)00005-2. RX PUBMED; 10225277. RA Swanson M.M., MacFarlane S.A.; RT "The E116 isolate of Dutch pea early-browning virus is a recombinant RT virus"; RL Virus Res. 60(1):87-94(1999). XX DR MD5; 1c7dd5b8d98e8431ec9ebce352953f73. DR RFAM; RF01101; TLS-PK6. XX FH Key Location/Qualifiers FH FT source 1..2868 FT /organism="Pea early-browning virus" FT /map="RNA2" FT /strain="Dutch" FT /isolate="E116" FT /mol_type="genomic RNA" FT /db_xref="taxon:12294" FT CDS 520..1131 FT /product="coat protein" FT /db_xref="GOA:O91255" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:O91255" FT /protein_id="CAA07067.1" FT /translation="MAGTYGETFDGKILDDLSGAWVEKHNWSDVLRRLTKIKFALQADR FT DMIPGIVEDLSTEIPVDENTRFPNGKVYHLLTKEMLMAIEAIHAASSFKRRAEEKNNVN FT PRQRFEGEGSTTQPPPGGLVVRPAAASGDSSLSEDLFSNSKLDDASTAFHKSLATLKGS FT RPKAVVQRTFEKEYSLRWSATAPAAAAGGTPAGGGRGPGA" FT CDS 1248..2012 FT /product="29 kDa protein" FT /function="nematode transmission" FT /db_xref="GOA:O91256" FT /db_xref="InterPro:IPR007935" FT /db_xref="UniProtKB/TrEMBL:O91256" FT /protein_id="CAA07068.1" FT /translation="MGNGDWSSRWPNDHLFIDDFGKLVWFDALTDIVRISHFVSQVPTD FT LSPIPSSYISFIDGRIPMCVNHLGWVYIRVKFQSEEVYYQKFGEVDVSGFGESELPPDF FT EITFKKVTTLVDRSLMRKAELLEKTNAELRLELSNKLVSLEKEKVRLQEELSRKHGNFA FT EMRDGLILNFSKVGGRIQRMIVRSIQNQFKLVSEINNDGDRWATMGASIVLREGTKYLG FT FSVVTDNGRTGVEFDLTRLNALDAGTLLASVV" FT CDS 2185..2418 FT /pseudo FT /note="recombined partial sequence of RNA1 encoded gene for FT 12 kDa protein" XX SQ Sequence 2868 BP; 789 A; 499 C; 726 G; 854 T; 0 other; ataaaacatg agaagcttgg agggacctcc ttgctgatca cggtggtgtt ggatggatga 60 catcgagctt aaccacaccg ccgcttatcc ctttgtcgag aggtttttct cggctgcatt 120 gattctctgg atttagttgg tcgctagaag actgaaggag atagatgtat ttattagtta 180 gtaatgaagt gccttctcat tcacattaaa cgtgagacgc atcgcttgcg aaagtagctt 240 tttaaaacaa ggtttgtaga acggtcatat tctactaatc tgacgaaaaa cgactttcta 300 ggtttactag tttgatcgca agtctgtcat tggccgtatg ataggttggg gtttcgcact 360 atctttagag aaagtgttaa tgtagtgaga ttgttcgcac tacaggcata attatactga 420 ttgtgtcttc gttgatagag actatcaagt ttgttattat aattaagaaa ggaagacttg 480 tcgacacacc ggttgcttta tcacttgctc tttctacaca tggcaggtac gtatggtgaa 540 acgttcgatg ggaagattct agacgatctt tctggagctt gggtcgaaaa acacaactgg 600 agcgatgtgc ttcgtagatt gacaaaaatc aagtttgctc ttcaagccga cagagacatg 660 attcctggaa ttgttgaaga tctaagcaca gaaattccgg tggatgagaa cacccgtttc 720 ccaaatggta aggtttatca ccttttgacg aaggagatgt tgatggcgat cgaagctatt 780 catgcagctt cttcttttaa gaggagagcg gaagaaaaga ataacgtcaa cccgcgacag 840 cgattcgaag gcgaggggtc aactacgcaa ccaccgccgg gtggtctagt agttcgacct 900 gcggcggcta gtggagattc ttcactgagc gaagacttgt tttcaaacag caaactagat 960 gacgctagta ctgcattcca caaaagtctg gccacattga aaggtagtcg cccaaaggct 1020 gtggttcagc gtacgtttga gaaagaatac tctttgagat ggtctgcaac tgctccggcc 1080 gcggccgcgg gtggtactcc tgctggagga ggtcgtggac ctggcgcata aactctgatc 1140 tccttgaagt gatgacatgc gctgtcattt tgtccgaagg acttgaatgt tacgaatttc 1200 tttgacataa gtcgcagatg gcataccatt atacaaagtt tcggactatg ggcaacggtg 1260 attggtcttc aaggtggccg aacgatcact tgtttattga tgattttgga aagttagttt 1320 ggttcgacgc tctgacagat attgttagga tttctcattt cgtatcacaa gtaccgaccg 1380 acttatctcc aattccgagt tcttacatta gtttcatcga cggacggatt cccatgtgcg 1440 ttaatcacct gggttgggtg tatatacgcg tgaaattcca gtctgaagag gtttactatc 1500 agaagtttgg tgaagtggac gtaagtgggt ttggcgagtc ggaactgcca cctgatttcg 1560 agattacctt caaaaaggta actacactag tggacagatc tttgatgcga aaagccgaac 1620 ttctcgagaa gacgaacgct gagttaagat tggagttatc taataaactc gtttctctgg 1680 aaaaagaaaa agtgcgtttg caagaggaac tcagtcgtaa gcacggcaac tttgcggaga 1740 tgcgtgacgg gctgattctc aatttctcga aagttggggg aagaattcaa cgtatgatcg 1800 tcaggtcaat ccagaaccag ttcaaactgg tttcagaaat caacaatgac ggagatagat 1860 gggctacaat gggagcgtca attgttctga gagagggaac taagtattta gggttcagtg 1920 ttgtgacaga taatggtcga accggcgtcg aatttgatct gactagatta aacgcgttgg 1980 acgctggaac tttattagcg tctgtggtct gatgtttgag aattgcatac tctgtttgag 2040 caggacgtgg aaatcgtccg gtggaccgta ccataacggt ttctgttgta ggaagcagat 2100 aaaataattc ctgtagctgc gtatcacgca gggtggttgt taccataaac aataatgtcg 2160 ttggttgcat ttaaaataat tccactagcc gaaaagtaca gtataaaaag aaagtgtgag 2220 tgtgttaatt gtggatggta tccagcaatc gaagttcgtg ctgactttat tgaagtgtat 2280 ttttgctgcg gcatgaaaca cttgagtaaa gtggtttctt ctaatccgaa gaggaaggag 2340 agattaaact cgccaaaaag gttattccga gatgatttag atttcggttt aactgactta 2400 tttaatgagt cgtattagtt tgatgagagg aaagttcctc tcgtttaaat tgcaaaccta 2460 ccgagtagat tcctacctag aaaacctgag aaggttagta aagatggata cgaaagttga 2520 ttggaggcag ttttaaattg atgaacgttc actacattag tagttttgtt tttcaattag 2580 cagtagttta agtactatta ttttgtgtcg tgtgagcgac acttgtgtta tgctattagt 2640 ttgtgtatga gctaggtatt ggttgattcc atgcttaagt ggttctaccg tagggacgat 2700 agtttgttat tattattatt ttaagtttga tttgtgaaaa tcttctgctt tctgaaaagg 2760 tcgttgacca agagaaagtg ggagggtgag taagtactct tgaagtggtg atggttacaa 2820 ggcatagaag ggttagaccc ttccgcctac gtaagcgtta ttacgccc 2868 //