ID AJ006460; SV 1; linear; genomic DNA; STD; VRL; 2804 BP. XX AC AJ006460; XX DT 16-NOV-1998 (Rel. 57, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE East African cassava mosaic Malawi virus-Malawi[K] AV1, AV2 and AC1 genes, DE (isolate MK) XX KW AV2 protein; coat protein; rep protein. XX OS East African cassava mosaic Malawi virus-Malawi[K] OC Viruses; Geminiviridae; Begomovirus. XX RN [2] RP 1-2804 RA Robinson D.J.; RT ; RL Submitted (27-MAY-1998) to the INSDC. RL Robinson D. J., Scottish Crop Research Institute, Virology, Invergowrie, RL Dundee, DD2 5DA, UK XX RN [3] RA Zhou X., Robinson D.J., Harrison B.D.; RT "Types of variation in DNA-A among isolates of East African cassava mosaic RT virus from Kenya, Malawi and Tanzania"; RL J. Gen. Virol. 79:2835-2840(1998). XX DR MD5; 3cfd35ff7f69dfca3a039b0c6f040feb. DR EuropePMC; PMC1079959; 15784145. XX FH Key Location/Qualifiers FH FT source 1..2804 FT /organism="East African cassava mosaic Malawi FT virus-Malawi[K]" FT /chromosome="DNA-A" FT /segment="A" FT /isolate="MK" FT /mol_type="genomic DNA" FT /db_xref="taxon:223265" FT CDS 174..524 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q9YJQ1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9YJQ1" FT /protein_id="CAA07046.1" FT /translation="MWDPLLNEFPDSVHGFRCMLAIKYLQALEETYEPNTLGHDLVRDL FT ICVIRARDYVEATRRYNHFHSRLEGASKAELRQPVQQPCCCPHCPRHKQATIMDVPAHV FT SKAQNVQNVQKS" FT CDS 334..1110 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q9YQR0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q9YQR0" FT /protein_id="CAA07045.1" FT /translation="MSKRPADIIISTPVSKVRRRLNFDSPFSSRAAVPIVQGTNKRRSW FT TFRPMYRKPRMYRMYRSPDVPRGCEGPCKVQSYEQRDDVKHTGAVRCVSDVTRGSGITH FT RVGKRFCVKSIYVLGKIWMDENIKKQNHTNQVMFFVVRDRRPYGTSPMDFGQVFNMFDN FT EPSTASIKNDLRDRFQVLRKFHATVVGGPSGMKEQALIKRFFKVNNHVVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1568..2647) FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:Q9YQQ9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9YQQ9" FT /protein_id="CAA07047.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLQALSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPKFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGVFQVDARSARGEGQHLAQVYAEALNASSKSEALQIIKEKDPKFFFLQFH FT NISANADRIFQLPPQPYVSPFLSSSFTHVPDEIEIWVSENICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQITGGIPTIFLCNPGPTSSYKEFLEEEKNQSLKAWALKNATFITLHEPL FT FSSAYQSPTPHREEQGTQT" XX SQ Sequence 2804 BP; 726 A; 553 C; 704 G; 821 T; 0 other; accggatggc cgcgcccgac aaagtaggtg gaccccattg gacggccgcg tccgtaaagg 60 ataatggtcc ccgcgcacgt gttgctgtca gccagtcata ttcacgcgtg aaagtctaga 120 tatttgatta gtgtcgttat atacttcgtc gcgaagtagt ggagcgcgtc aacatgtggg 180 atccattgtt gaatgagttc cccgattctg tgcacggttt tcgctgtatg cttgctatta 240 aatatttgca ggccttggag gaaacctacg agcccaatac tttgggccac gatctagtcc 300 gtgatctcat ctgtgttatc cgagcccgtg attatgtcga agcgacccgc agatataatc 360 atttccactc ccgtctcgaa ggtgcgtcga aggctgaact tcgacagccc gttcagcagc 420 cgtgctgctg tccccattgt ccaaggcaca aacaagcgac gatcatggac gttccggccc 480 atgtatcgaa agcccagaat gtacagaatg tacagaagtc ctgatgttcc tcgaggatgt 540 gaaggcccat gtaaggtgca gtcctatgaa cagagagacg atgttaagca caccggtgct 600 gtgcgttgtg ttagtgatgt tactcgtggt tcgggtatta ctcatagggt agggaagaga 660 ttttgtgtga agtcaatata tgttttagga aagatctgga tggatgaaaa catcaagaag 720 caaaaccata ctaaccaggt tatgttcttc gtagtccgtg acagaaggcc ttatggcaca 780 agccccatgg actttggaca ggtttttaat atgtttgata atgagcccag tacagcttct 840 attaagaatg atttgcgaga taggttccaa gtgttgcgga aattccatgc caccgtggta 900 ggtggtccct caggcatgaa ggagcaggcg ttgattaaga ggttttttaa ggttaataat 960 catgttgtgt ataatcacca ggaggcagcg aagtatgaga atcatacaga aaatgcgttg 1020 ttgttgtata tggcatgtac gcatgcctct aatccagtgt atgctacgct taaaatacgc 1080 atctattttt atgatgcagt aacaaattaa taaaggttga attttatttc atgttgctcc 1140 gtaacttgga gtgtgtgcag taatacattg tataggacat gatcaacagc tctaagtaca 1200 gtgttaatgg aaataactcc tatcatattt aaatatttga gcacttgata tctaaatact 1260 tttaaggaaa gaccagtcgg aggccgtaag gtcgtccaga ccttgaagtt gagaaaacac 1320 ttgtgaatcc ccaatgcctt cctgatgttg tggttgaacc gtatctggag tgtgatgata 1380 tcgtggtgca tgtaccctgg tctcttgtcg tggttggtga ttgcgaaata gaggggattt 1440 gttatttccc aagtaaaaac gccattcttt gcttgaggcg cagtgatgag ttcccctgtg 1500 cgagaatcca tgattgatgc agtcgatatg gagatagaac gagcagccgc attcgaggtc 1560 taccctccta cgtctgagtg ccctgttctt cacggtgcgg tgttggactt tgataggcac 1620 ttgagaacaa tggctcgtgg agggtgatga aggtggcatt ctttaaagcc caggctttaa 1680 gggattggtt cttttcctct tccagaaact ctttatatga tgatgttggt cctggattgc 1740 agaggaagat agtgggaatg ccgcctgtaa tttgaatcgg cttcccgtac tttgtattgc 1800 tttgccagtc cctttgggcc cccataaatt ctttgaagtg cttgaggtag tgtgggtcga 1860 cgtcatcaat gacgttgtac caggcgtcgt tgctgtagac ctttggacta agatccaaat 1920 gtccacacaa gtagttgtgt ggtcccagag atcgggccca catcgtcttc cctgtcctac 1980 tatcgccttc tagaacaata ctgatcggtc tccatggccg cgcagcggga ctgcatatat 2040 tttcggatac ccatatttct atttcgtctg ggacgtgtgt aaatgaggat gataaaaacg 2100 gacttacata aggttgtggc ggaagctgga agattctatc tgcgttagca gatatgttat 2160 ggaactgtaa aaaaaaaaac ttcggatctt tttctttaat aatttgaaga gcttctgatt 2220 tagaagaagc attcaacgct tctgcatata cctgagctaa atgctggccc tcaccccttg 2280 cacttctggc atcgacttgg aaaactccat cgtcaagaaa ttcccctccc ttttcaatgt 2340 aagctttgac atcggacgat gatttagctc cctgaatgtt tggatggaaa tgtgttgatc 2400 gggatgggga aatgagatcg aagaatttcg ggttggtaca ttggaattta ccttcgaatt 2460 gaatgagaac atggagatga ggcactccat cctgatgtag ttctctgcaa accctaatga 2520 atttgatatt cgtcgggtaa gaaagggctt gtaattggga aagggcctct tctttggtta 2580 atgagcatcg gggatatgtt atgaaataat ttttggcatt gatttgaaaa cgacctgctc 2640 ttggcatatt tgctgtcgtt ttagatcggg ggacactcaa aactccaggt gaatggtgga 2700 acgggggaca ttatatagga tgtcccccaa tggcatatgt gtaaataggt agagttacat 2760 tcaaaatttg aatttcgaat aatggcggcc atccgattaa tatt 2804 //