ID   AJ002453; SV 1; circular; genomic DNA; STD; VRL; 2741 BP.
XX
AC   AJ002453;
XX
DT   31-MAR-1998 (Rel. 55, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 6)
XX
DE   Bhendi yellow vein mosaic virus-[301] Pakistan strain segment A, complete
DE   sequence
XX
KW   AC2 gene; AC3 gene; AC4 gene; AV2 gene; coat protein; rep gene.
XX
OS   Bhendi yellow vein mosaic virus-[301]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [2]
RP   1-2741
RA   Robinson D.J.;
RT   ;
RL   Submitted (23-OCT-1997) to the INSDC.
RL   Robinson D. J., Scottish Crop Research Institute, Virology, Invergowrie,
RL   Dundee, Scotland, U.K., DD2 5DA
XX
RN   [3]
RX   PUBMED; 9568988.
RA   Zhou X., Liu Y., Robinson D.J., Harrison B.D.;
RT   "Four DNA-A variants among Pakistani isolates of cotton leaf curl virus and
RT   their affinities to DNA-A of geminivirus isolates from okra";
RL   J. Gen. Virol. 79:915-923(1998).
XX
DR   MD5; c9a567ff71beb5ab10827cbf7e64bf2d.
DR   EuropePMC; PMC3824786; 28324417.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2741
FT                   /organism="Bhendi yellow vein mosaic virus-[301]"
FT                   /segment="A"
FT                   /strain="Pakistan"
FT                   /isolate="oyvm301"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:221524"
FT   CDS             121..486
FT                   /gene="AV2"
FT                   /db_xref="GOA:O73499"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:O73499"
FT                   /protein_id="CAA05451.1"
FT                   /translation="MWDPLVNEFPDTVHRFRCMLSVKYLQLLSQDYSPDTLGYELIRDL
FT                   ICILRSRNYVEASCRYRHFYARVESTPASELRQPLHQPCCCPHCPRHKTTGMDKQAYEQ
FT                   ETQNVPDVQKSGCSKGM"
FT   CDS             281..1051
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:O73498"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:O73498"
FT                   /protein_id="CAA05450.1"
FT                   /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT                   IGKRFCVKSVYVLGKIWMDENIKTKNRTNSVMFFLVRDRRPTDKPQDFGEVFNMFDNEP
FT                   STATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKNENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   CDS             complement(1054..1458)
FT                   /gene="AC3"
FT                   /db_xref="GOA:O73580"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:O73580"
FT                   /protein_id="CAA05454.1"
FT                   /translation="MDSRTGERITAAHSTNGVFIWEVPNPLYFKILSHDNRPFTTNMDI
FT                   ITMRIQFNYNLRKALGVHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISLNL
FT                   VIKAVEHVLYNVINQTMYVDQYSDIKFKLY"
FT   CDS             complement(1151..1603)
FT                   /gene="AC2"
FT                   /db_xref="GOA:O73501"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:O73501"
FT                   /protein_id="CAA05453.1"
FT                   /translation="MQHSSFSPNRSTPVPIKVQHREAKRAHRRKRVDLECGCSYYLSIN
FT                   CHNHGFSHRGTHHCSSFNEWRLYLGGSKSPLFQNPQPRQPSIHDEHGHHNNEDPIQLQP
FT                   SESSGSAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCNLT"
FT   CDS             complement(1500..2588)
FT                   /gene="AC1"
FT                   /db_xref="GOA:O73500"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:O73500"
FT                   /protein_id="CAA05452.1"
FT                   /translation="MPPKRFLINSKNYFLTYPKCSLTKEEALSQIQNLQTPVNKKYIKI
FT                   CREFHEDGEPHLHVLIQFEGKYKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLE
FT                   KDGDTIDWGGFQIDGRSARGGQQSANDAYAAALNAGSKSEALRVIKELAPKDYVLQFHN
FT                   LNANLDRIFTPPMEVYVSPFSSSSFDQVPEELEEWAAENVVSAAARPLRPLSLVLEGES
FT                   RTGKTQWARSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDWQ
FT                   SNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWTLKNATFVFLTQPLY
FT                   SGTNQSSTQGSEESAQEETSGP"
FT   CDS             complement(2144..2434)
FT                   /gene="AC4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:O73502"
FT                   /protein_id="CAA05455.1"
FT                   /translation="MGNLIFTCSSSSRENTSAKINDSSTWSPQPDQHISIRTFRELNQV
FT                   PTSSLIWRRTETPSTGEGFRSMDDLHEEDNNQPMTLTPQRLTQVVSQRLLE"
XX
SQ   Sequence 2741 BP; 727 A; 556 C; 646 G; 812 T; 0 other;
     accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgacg atgcagactc        60
     aaagcttaga taacgctcct tcggctataa gtacttgcgc actaagtttc aaattgaaac       120
     atgtgggatc cactagtaaa cgaattcccg gatacggtgc acaggtttcg ttgtatgcta       180
     tctgtcaaat atttgcaact tttgtcgcag gattattctc cagatactct tgggtacgag       240
     ttaatacggg atttaatttg tattttacgc tcccgtaatt atgtcgaagc gagctgccga       300
     tatcgtcatt tctacgcccg cgtcgaaagt acgccggcgt ctgaacttcg gcagccctta       360
     caccagccgt gctgctgccc ccattgtccg cgtcacaaaa caacaggcat ggacaaacag       420
     gcctatgaac aggaaaccca gaatgtaccg gatgtacaga agtccggatg ttccaagggg       480
     atgtgagggt ccctgtaagg tacagtcgtt tgaatctcga cacgatgtcg ttcatattgg       540
     taaggtaatg tgtatttcgg atgttacgcg tggagtcggt ttgactcatc gtataggtaa       600
     gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg agaacatcaa       660
     gaccaagaac cgtacgaatt cggtgatgtt tttccttgtt cgtgatcgac gaccgacaga       720
     taaaccacaa gattttggtg aagtatttaa tatgtttgat aacgagccca gtacggccac       780
     cgttaagaac atgcataggg atcggtacca ggtgttgagg aaatggcatg caaccgttac       840
     tggtggtcaa tatgcatcga aggaacaggc gttggttaag aagtttatca gggttaacaa       900
     ttatgtcgtt tacaaccagc aagaggcagg aaaaaacgag aatcacaccg agaatgcatt       960
     gatgctttac atggcttgta ctcatgctag caacccagtt tatgctacgc ttaagattcg      1020
     gatttatttt tatgactctg taacgaattg aaattaataa agtttgaatt ttatatctga      1080
     atattggtct acatacattg tttgattaat tacattgtac aatacatgtt caacggcttt      1140
     aataactaaa ttaagtgaga ttacacctag attgttgaga tatttgagga cttgggtttt      1200
     gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc ggaaggttag      1260
     aaaacacttg tgcactccca gagctttccg aaggttgtag ttgaattgga tcctcattgt      1320
     tatgatgtcc atgttcgtcg tgaatggacg gttgtcgtgg ctgaggattt tgaaataaag      1380
     gggatttgga acctcccaga taaagacgcc attcgttgaa tgagctgcag tgatgcgttc      1440
     ccctgtgcga gaatccatgg ttgtggcagt tgatacttag gtaatagctg catccacact      1500
     caaggtccac tcgtttcctc ctgtgcgctc tcttcgcttc cctgtgttga actttgattg      1560
     gtaccggagt agagcggttg ggtgagaaag acgaatgttg cattttttaa agtccacgct      1620
     ttcaaagctg agttcttttc ctcgtccaag aactccttat agctagcgtt ggggcctgga      1680
     ttgcagagga agattgttgg aatgcctcct ttaatttgaa ctggcttccc gtactttgtg      1740
     tttgattgcc agtctctttg ggcccccatg aattctttaa agtgtttcag ataatgcggg      1800
     tcaacatcat ctataatgtt gaaccacgca tcgtttgaat atactttagg gcttagatcc      1860
     aagtgcccac ataaataatt atgtggcccc aaggaacggg cccattgtgt ttttccagtt      1920
     ctagactccc cctctagaac taaactcaat ggtctcagag gccgcgcagc ggcactgacg      1980
     acgttctcgg cagcccattc ctcaagttct tctggaactt gatcaaaaga agaagaagaa      2040
     aaaggagata cataaacctc cattggaggt gtaaaaatcc tatctaaatt agcatttaaa      2100
     ttatgaaatt gtaaaacata atcctttgga gctaactcct taattactct aagagcctct      2160
     gacttactac ctgcgttaag cgctgcggcg taagcgtcat tggctgattg ttgtcctcct      2220
     cgtgcagatc gtccatcgat ctgaaaccct ccccagtcga tggtgtctcc gtccttctcc      2280
     agataagact tgacgtcgga acttgattta gctccctgaa tgttcggatg gaaatgtgct      2340
     gatctggttg gggagaccag gtcgaagaat cgttgatttt ggcacttgta ttttccctcg      2400
     aactggatga gcacgtgaag atgaggttcc ccatcttcat gaaactctct gcagatttta      2460
     atgtattttt tgtttactgg ggtttgtagg ttttggattt gggaaagtgc ttcctctttg      2520
     gtgagagagc acttgggata agtgaggaaa taatttttgg aattaataag gaaacgcttt      2580
     ggaggcatgt tgaccaagtg agaggacccg attgaccgct cttgcaactc tcccctgtat      2640
     attgggtctc aatatatagt gagacccaaa tggcattatc gtaatttgga caatagattc      2700
     aaaatcctca cgctccaaaa agcggccatc cgactaatat t                          2741
//