ID AJ000690; SV 1; linear; mRNA; STD; VRL; 2631 BP. XX AC AJ000690; XX DT 26-AUG-1997 (Rel. 52, Created) DT 27-AUG-1997 (Rel. 52, Last updated, Version 2) XX DE Turnip mosaic virus mRNA for replicase and coat protein XX KW coat protein; CP gene; NIb gene; replicase. XX OS Turnip mosaic virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2631 RA Ryu K.H.; RT ; RL Submitted (25-AUG-1997) to the INSDC. RL Ryu K.H., Department of Plant Pathology, Cornell University, 353 Plant RL Science Building, NY, 14853, USA. XX RN [2] RA Park W.M., Lee S.Y., Kim J.K., Ryu K.H.; RT "Nucleotide sequence of 3'-terminal region of TuMV-Ca"; RL Unpublished. XX DR MD5; 6eea312f6beafb16969a8938b7e9f697. XX FH Key Location/Qualifiers FH FT source 1..2631 FT /organism="Turnip mosaic virus" FT /strain="TuMV-Ca" FT /mol_type="mRNA" FT /db_xref="taxon:12230" FT CDS <1..>2403 FT /codon_start=1 FT /gene="NIb" FT /gene_synonym="CP" FT /product="coat protein" FT /product="replicase" FT /db_xref="GOA:O41344" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:O41344" FT /protein_id="CAA04244.1" FT /translation="QTQQNRWMFEQLNGNLKAIAHCPSQLVTKHTVKGKCQMFDLYLKL FT HDEAREYFQPMLGQYQKSKLNREAYAKDLLKYATPIEAGNIDCDLKERTVEIVISDLRG FT YGFETCNYVTDENDIFEALNMKSAVGALYKGKKNDYFAEFTPEVKEEILKHSCERLFLG FT KMGVWNGSLKRELRPLENVEANNTRTFTAAPLDTVMGGKVCVDDFNNQFYDHNLRAPLE FT DGMTKFYCGCDRLLESLPDGWVYCDADGSQFDSSLSPYLINAVLNIRLGFMEEWDVGEV FT ILRNLYTEIVYTPYPTPDGTLVKKFKGNNSGQPSIVVDNTLMVILAVNYSLKKSGIPSE FT LRDSIIRFFVNGDDLLLSVHPEYEYILDTMADNFRELGLKYTFDSRTREKGDLWFMSHQ FT GHKRDGIWIPKLEPERIVSILEWDRSKEPCHRLEAICAAMIESWGYDKLTHEIRKFYAW FT MIEQAPFSSLAQEGKAPYIAETALRKLYLDKEPAQEDLTHYLQAIFEDYEDGTEACVYH FT QAGETLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKGKNAAQEEGELDKEVNAG FT TSGTFSVPRLKSLTSKMRVPRYSKRVALNLDHLILYTPEPTDLSNTRSTRKQFDTRFEG FT VMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVEFPIKPLIDHAKPT FT FRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFDFYEMTSRTPIRAR FT EAHIQMKAAALRGANNNLFGLDGNLGTTVENTERHTTEDVNRDMHNLL" XX SQ Sequence 2631 BP; 824 A; 532 C; 665 G; 610 T; 0 other; caaacccagc agaatcggtg gatgttcgag cagctcaatg ggaacctgaa agcgatagca 60 cactgcccta gccaacttgt gacaaagcac acagttaaag gaaaatgtca gatgtttgac 120 ttgtatctca agttgcatga tgaagcacga gagtatttcc aaccgatgct gggccagtat 180 caaaagagca aactcaatcg agaagcatat gcaaaggatc ttctgaaata tgcaacgcca 240 atcgaagcag gaaacatcga ctgtgatctg aaagaaagga cagttgaaat agtcatatca 300 gatctgcgag gttatggttt cgaaacatgt aattatgtca ctgatgagaa tgacatattc 360 gaagctctta acatgaaatc cgcagttgga gcgttgtata aaggaaagaa gaacgattac 420 tttgctgagt tcacacccga ggtgaaagaa gaaatactga aacatagttg cgaacgactc 480 ttcttgggca agatgggagt gtggaatggc tcgttgaagc gagagttgcg accactagaa 540 aacgtggaag ccaacaatac acgcacgttt acagccgcac cactagacac agtgatgggt 600 ggaaaagttt gtgtggatga tttcaacaac cagttctatg atcacaacct tagagctcct 660 ttggaggatg gcatgacaaa gttttattgt ggttgtgatc gattgttgga gtcgttgcca 720 gatggttggg tgtattgtga tgctgatggc tcacagtttg acagctcgct atcaccatac 780 ttgatcaatg cagtactcaa catccgctta ggattcatgg aagagtggga tgtaggggag 840 gtaatcctga gaaatttgta caccgaaatc gtctataccc cctatcctac accagatggt 900 acactcgtca agaaattcaa aggaaacaat agtggacagc catcgattgt tgtagacaac 960 acgctcatgg tcatactggc agtcaactat tcactcaaga aaagtggaat tccaagtgag 1020 ttgcgcgaca gcatcatcag attcttcgtc aacggagatg atttactgct aagcgtacac 1080 ccagagtatg agtacatcct tgacactatg gcagacaatt ttcgtgaact gggcctgaag 1140 tatactttcg actcgaggac cagggaaaaa ggagaccttt ggtttatgtc gcaccagggg 1200 cacaaaagag atggaatctg gatccctaag ctcgaaccag agcgaatagt atcgattcta 1260 gaatgggatc ggtcaaaaga gccatgccat cgactagagg caatctgcgc agcgatgatt 1320 gagtcgtggg gatacgacaa gttaactcac gagatacgca agttttacgc gtggatgatt 1380 gaacaagctc catttagctc cctagcacaa gaagggaaag ctccttacat agcggaaaca 1440 gcgctgagga agctctacct tgataaggaa ccagctcaag aggatctcac ccattactta 1500 caagcaatct ttgaggatta tgaagatggc actgaggctt gtgtttatca ccaggcaggt 1560 gagacgcttg atgcaggttt gacagacgag caaaagcagg cggagaagga gaagaaggag 1620 agagagaagg cagaaaagga acgagagagg cagaagcagt tggcactcaa gaaaggcaaa 1680 aacgcagcac aagaagaggg agaactcgac aaggaagtaa acgctggaac ctctggaact 1740 ttcagtgtac ccagacttaa gagtctgaca agcaagatgc gcgtgccaag atacagcaaa 1800 agagttgctc taaacctcga tcatctaatc ctatacacgc cggagccgac ggacctatcc 1860 aacacacgtt caacgcgaaa gcagtttgac acaaggtttg aaggtgtaat ggccgactac 1920 gaactgacgg aggataaaat gcaaatcatt ctcaatggtt taatggtctg gtgcattgag 1980 aacggaacct cccctaacat aaacggaatg tgggtgatga tggacggcga tgatcaggtg 2040 gaattcccga tcaaaccgct cattgaccac gccaaaccca catttaggca gataatggcc 2100 catttcagtg acgtagctga agcgtacatt gaaaagcgta accaagaccg accatacatg 2160 ccacgatatg gtcttcagcg caacttaacc gacatgagct tagctcgata cgcgtttgat 2220 ttctatgaaa tgacttctag aactccaata cgtgcgagag aagcacacat ccagatgaaa 2280 gcagcagcac tgcgtggcgc aaataacaat ttgttcggct tggatggaaa ccttggcaca 2340 acggtagaga acacggagag gcatacgacc gaggacgtta atcgggacat gcataactta 2400 cttggcgtta aggggttatg aagttgtatg ctggtagact ataagtattt aagtttactc 2460 gttagtattc tcgcttatgg gaaatatgta agtttgttaa agcagccagt gtgactttgt 2520 catgtgtgtt gttgttactt tctatatttt cgccgaacat tttattggtg ttagcgcatg 2580 tggtgaggat cgtcctcgat tgccttaaca tttgatagga tgcaagggac a 2631 //