ID AF536943; SV 1; linear; genomic RNA; STD; VRL; 3520 BP. XX AC AF536943; XX DT 28-AUG-2003 (Rel. 77, Created) DT 28-AUG-2003 (Rel. 77, Last updated, Version 1) XX DE Barley mild mosaic virus segment RNA2, complete sequence. XX KW . XX OS Barley mild mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-3520 RA Lee K., Choi M., Lee W.; RT "Nucleotide sequence of barley mild mosaic virus RNA 2"; RL Unpublished. XX RN [2] RP 1-3520 RA Lee K., Choi M., Lee W.; RT ; RL Submitted (09-AUG-2002) to the INSDC. RL Department of Agricultural Biology, Bioresources Science College of RL Agriculture, Chonbuk National University, 664-14 1-ga, Deokjin-dong, RL Chonju, Chonbuk 561-756, Korea XX DR MD5; ae5d42c71abced9e2af40f5c212ba662. XX FH Key Location/Qualifiers FH FT source 1..3520 FT /organism="Barley mild mosaic virus" FT /segment="RNA2" FT /host="barley cultivar baegdong" FT /mol_type="genomic RNA" FT /db_xref="taxon:12466" FT CDS 142..2826 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q71BF0" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR036417" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q71BF0" FT /protein_id="AAQ10759.1" FT /translation="MMMNSTIRQGWQQVLKRFSIPASGDRLIISNPTDQPIGLFGAFDT FT SLQTLSQVGDDPEVLKQKIHIPMHLDIASALEASPRSFPWIFLTNSFCTFGGSIHAQSL FT QTFATAEFKSGFCYMNLLIPLSFDIIDTHADSFRIFVEQLPDMLGAYPTLSMVLNVMLH FT AATRFPEIVSSPVPTIAFDAESLQFHVTGKRGVPGMWNILKAGRVYVLLSLAADGVGCE FT YMLYPVGAAPQYSFWKKSMDHFTSDRAVEFLAMQSLLASALEQDYTTHDALDALLAALQ FT NAGYTNVVARERRFPNGHDPSTVWLNLSEAPISEKLTDLKRYLLVGHRSDDTADITHNV FT HQYVFEVLKTMSVQFSKTTNAYNRARFEVNHKIIWNAEYGRGPQQNAELEALVLFLNRQ FT SLEIENILHRTTSPVVVTDWQPDVPPAAPEVSQEEPTLATATPITEAPAHATPVEVVNL FT PPARSYWAETLVGILTAILGTIFALLTRALIRAKKLRRKSTFPWVTLDSGDEDDDHSGG FT GGGSPQTPGGQPPASPAHGTHQSRLSVQDIASDTSLLSVDLDEDTLSQYDETFQRIRRA FT LFETSFADILQNSARWISTLEAMALADGNAPYTLLAQYLNGIEETYTNFRNTGHVSRTT FT LSGFFALEDSLRAAGIAFGATTPTQTIHNQFAGSPARRWKTRFEQIACELGDASIKSLA FT DLANIIDTERERSDLTQFDVLAASSISSLCRAVRIISDTTDPDAQLALVENATAMQNNI FT NAILGTNVSIPFLSATRRLLITRRIQQAGAENRSGATPDTIQQLADAELAKIVSEANMF FT NEMAASQRDIANATREATIREHVLSPVNALANVGMAAAFFRSGGMRSRALHPAMPTMPG FT VSAATGRPMFQAFRGRGHRLNRR" XX SQ Sequence 3520 BP; 918 A; 1014 C; 774 G; 814 T; 0 other; aaaaataaaa caaaactaca acccaataca aacaacaaac aacaatcaaa caaacaaaca 60 cacacctaac acacacaaca aaccacagtt cacagcttcg aaacgcggac tcacccaccg 120 cactctcaga attgaacata aatgatgatg aactccacga ttcgccaagg atggcagcaa 180 gtgctcaaac gcttttctat cccagcatcc ggagataggc tcatcatttc caatcccacc 240 gatcaaccca taggtctttt cggagcattc gacacatcat tgcaaacact ctcgcaggtt 300 ggcgatgatc ccgaggtttt gaagcagaaa atccacatcc ccatgcacct agacattgca 360 tccgcgctcg aagccagccc ccggtccttc ccatggattt tcctcacaaa ctccttctgc 420 acttttggtg gttccataca cgcccagagt ctccaaacct tcgcaactgc tgagttcaag 480 agcgggttct gttacatgaa cctgctgata ccgctcagtt ttgacatcat tgatacacac 540 gctgattcct ttcgcatctt tgttgaacag ctccccgaca tgctaggtgc ctacccaacg 600 ctcagcatgg tgctaaacgt catgttgcac gcagccacgc gcttcccgga aattgtgagc 660 tcccccgttc caaccatagc attcgatgcc gaatcactgc agttccacgt aactggtaaa 720 cggggcgttc ctggcatgtg gaacatactc aaagccggcc gcgtgtatgt gcttctttcg 780 ctcgcggcgg atggcgtagg ttgtgagtac atgctgtatc ccgttggcgc tgcaccccaa 840 tactccttct ggaagaaatc tatggaccac ttcacatccg accgggccgt tgaatttcta 900 gccatgcaga gcttacttgc tagtgcgctt gaacaggatt acacaacaca tgacgcactt 960 gacgcattac tagcagctct acagaacgca ggctacacaa atgttgtcgc aagggaaaga 1020 agatttccaa atggccacga ccctagcact gtctggttga acctaagcga ggcccccatt 1080 tcggagaagc taactgatct taaacggtac ctcttggttg gtcacagaag cgacgacact 1140 gcggacataa cacacaacgt gcaccagtac gttttcgagg ttcttaaaac catgtctgtt 1200 cagttcagca agacaacgaa cgcttacaac cgcgcccgtt tcgaggttaa ccacaagatc 1260 atttggaatg cggagtatgg gcgcggtcct caacaaaacg ccgagcttga agctcttgtt 1320 ttgtttctta ataggcaatc gctggagatt gagaacattc tgcacagaac aaccagtccc 1380 gttgtcgtga cggactggca gcctgatgtt cctcctgcag cacccgaagt tagccaagaa 1440 gaacccacac ttgcaactgc aacaccaata actgaagcgc cagcacacgc aactcccgtt 1500 gaagttgtga acctgccacc agcacgctct tattgggctg aaacacttgt tggcatacta 1560 accgcgattc tagggaccat cttcgcctta ctcacccgag cgctcattcg tgcaaagaag 1620 ttgcgaagga agtccacctt cccctgggta acactggatt ctggagacga agatgacgac 1680 cattctggag gaggaggagg tagcccacaa acacctggcg ggcagccccc agcctcgcca 1740 gcacatggaa cgcaccaatc acgcctctct gtgcaagaca tagcatcgga caccagcctc 1800 ttaagtgtgg acctcgacga agacacgctc tcccaatacg acgaaacctt ccagaggatt 1860 cgccgtgcgc tctttgaaac cagttttgca gacatcctgc aaaactctgc tcgctggatt 1920 tccacgttgg aagcaatggc tttagcagac ggcaacgccc cttacacgct tctcgcgcaa 1980 tatctcaatg gaattgagga gacgtacacg aactttcgta acacggggca tgtttcgcgc 2040 acaacactct ctggcttctt cgctttagaa gacagcctgc gcgcggccgg catagccttt 2100 ggagccacaa caccaacgca aactatacat aaccagtttg ctggctcccc agcccgccgt 2160 tggaaaacac gcttcgaaca aatcgcatgc gaattgggcg acgctagcat taaatcgctc 2220 gcggatcttg cgaatattat cgacaccgag cgtgaaagaa gtgacttgac tcagtttgat 2280 gttcttgcag cctcttccat aagcagtctc tgtcgtgccg tccgcatcat cagtgacaca 2340 actgatccag acgcacaact agccctcgtt gagaacgcga cagccatgca gaacaacatt 2400 aacgccatcc tggggacgaa tgttagcata cctttcctca gtgcaacacg tcgcctgctc 2460 atcacgcggc gcatccagca ggctggtgca gaaaatcgtt ctggcgcaac acctgacacc 2520 atacagcagc tggctgatgc tgaacttgct aaaattgtta gcgaggctaa catgttcaac 2580 gagatggccg ctagtcagag ggacatcgct aatgccacac gagaggccac cattcgtgag 2640 catgtgctca gtcctgttaa tgccctggca aatgttggca tggctgctgc tttcttccga 2700 tctggtggaa tgcgctcaag ggctcttcac cccgcgatgc caacaatgcc cggtgtttct 2760 gctgccacgg ggcggccaat gttccaagcc ttcagaggcc gaggacatcg tctcaacaga 2820 cgataaaact ctgtgctttt gcacagcact gaacaagcga cacacgcttg ttgtgataat 2880 tgattccacg ctcagcgtgc cactgaataa gcgacacacg cttgttgtga taattaatta 2940 atttttgcgc agactctgtc tgtgttttct agagtgtgct gctctgcagc tgcattggag 3000 ggtttcacgg gaacgacatc atcaccccat ccacaaaccg cctgcattca catattgtgc 3060 cactttaaat actcatacgc ataggcaagt gcctttctgg cagagcatcc ctgagtgatg 3120 gccactcacg cgatcgcaat caactgactt aatcctcggt tttgcaatca aatagtgagt 3180 cccacctccg gatctgttcc cctggaactg caatcctcgt tatgttgtcg ctgattacta 3240 tcagctcgta aaccatgata tccacccaca attagctact cgtgtactaa cagtaccgga 3300 tacgcctatc ctgcacttaa gcctgcagga cgctaccagg tccgcctact gttaccattt 3360 gtgtagttcg ttgtggttcc acctcatatc taaattcagt acctgcatac aaaacgtcat 3420 gcatccctgt tcaacatgaa cgcgggtttg ggaagaagca agtcatcata gactgctggc 3480 attgttaggt tgacaatgtt tatgtacaca ggaacgtgat 3520 //