ID AF536942; SV 1; linear; genomic RNA; STD; VRL; 7273 BP. XX AC AF536942; XX DT 28-AUG-2003 (Rel. 77, Created) DT 28-AUG-2003 (Rel. 77, Last updated, Version 1) XX DE Barley mild mosaic virus segment RNA1, complete sequence. XX KW . XX OS Barley mild mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-7273 RA Lee K., Choi M., Lee W.; RT "Nucleotide sequence of barley mild mosaic virus RNA 1"; RL Unpublished. XX RN [2] RP 1-7273 RA Lee K., Choi M., Lee W.; RT ; RL Submitted (09-AUG-2002) to the INSDC. RL Department of Agricultural Biology, Bioresources Science College of RL Agriculture, Chonbuk National University, 664-14 1-ga, Deokjin-dong, RL Chonju, Chonbuk 561-756, Korea XX DR MD5; 6fd30fcdfccbb4db1836fe6ff6c02e60. XX FH Key Location/Qualifiers FH FT source 1..7273 FT /organism="Barley mild mosaic virus" FT /segment="RNA1" FT /host="barley cultivar baegdong" FT /mol_type="genomic RNA" FT /db_xref="taxon:12466" FT CDS 149..6934 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q71BF1" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q71BF1" FT /protein_id="AAQ10758.1" FT /translation="MEEFIPEVFYQNQVQSLKKILKSWKRGTSIYAYLAREQEVLAFLV FT LSPAHIAKLNKLLTEESARCALLAQNCETIEALAVVRQALQGVTLHFGDNGMEKGWLHM FT MKALDACLDESFSENAAALKKSIQAVGHKLIAAKNRIESCERSVNHLTTFQFAREYGLS FT TTYFEKLSNFGGHIRSFVWSSDSGEISQRPRKRNHHIRRAFRHSRATTGVSFGATASGS FT SVPSGLPARWCFNSAVFIWSLCGVLNLSMVVLQFTLKRHFGKFYFRYIMSGVLAICAVC FT CVHLKNRKGPILQASQKDKRFIGILAFCITVIYMFDVDLADSLSNNLHKISRLVNLFLD FT DNRGFATPALDNLTDFTTILQSGTSSDDLKIVQDTLAVVLQVDDEDATQDDAIYDSDGL FT QTFKQWVSHNQLAGMQLARPLQYPCSNTYGLTADNVAELATSMAQEAKQWSQVVGHTGS FT GKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYGRHEGWSNL FT GDKTIQVMTYGSALAAWKVDNKFLSQFDAVFLDESHLITTHALVFESICQEATNVRKFY FT VSATPRDGKKCPEAVRRYEIKTVKSECSSIDTFVRSQEKENSLYVLKHDTVLVFLAGKA FT ECDRAASNWNKLYSTNMYAYSLTGDNFTVAYENIVTRMLTDRIIVFCTNILETGVTLNV FT DCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGRAGRLRTGHAICIGNPETRHD FT LVPPETLYEAALLSFVHGVQFYINEHFENAWIEGVTKSQASVMTQFKLSPFLMRDIVRD FT DGAIPLSLHKILKDYTHRNTDLIGTKLSVMSHVYNSWPLYRTVHQSIFRGDSNVPQALK FT HARVPFNVSTAHDFPWENFAQACLEFQPRVLQVFSDSSSTSRIINLQIGKMHIVNSMEE FT VKININSYQRSAENLRSVKDSFESSIFRTKLLRGNPTGKITKRIETLLDNVRVLQQVHA FT KLEIIAYSGGEKLNMDKKSVDELNEIVELQSKNSLTAERLARMIASNKNPAPISVNLFA FT ESGGQMLGGLLVMVAAWFMDLVFWVSPRKQDDITIEGKGRAYNRDKRMGYDSYEEDEVR FT NKINKKFKERSTRFSNDSKPETSSKYRNLKQEFVNFYDLKTDANVLQAVFTAMDGAVLL FT QTEAPMADIDRVNRLLQEHFSDSDSQAVHEGLNTMVKCHLTMKDGRQFELDMEWHDPET FT VAKLGGEVGFRMNRDELRQVGATRYINPKAQTSAATLEGMTMKPMSSFTIDSAKMVGFI FT KTAKDTLNCILYGDWIIAPAHIQQGEGDITFIFQHTQFTTTTERLSSYGIRQFKGLDLV FT VIRRPQQIRAVKKDMRASILDTPTEIQMLYLSTKGGKYQVSTSAVCFPHYNNRWGHVIS FT TAEGMCGCIVFNPTTNHIVGIHVSYNDTRRRNEFQAFTSDVLTTINAPGHEIPFSPWVF FT DWKFCGYTTKPRNLQSAPNTLERLNINATGFGFKLNAQEIKPAMLRSTESFSREFPDTQ FT FKLIGEVKKGLIDKHTITGENPYFLEFLNTFKPYQWVQAFMDEYAPSILAYDAYFKDLK FT KYDRPPHASVFCKDTLTKAKHKMIKILEEAGMGRTLVRTTEQVLLDMAWTTSGGPLYHG FT KKIDIVQHLSDDELVQFSEACQQALITGTLDGVWNGSLKAELRSSQKIFERKTRVFTAA FT PITSLIAMKYYVDDFNKQFYKTHLKAPHTVGINKFNRGWQNLYEKLNKPGWTHGSGDGS FT RFDSSIDGFLFDVIKDIRKHFMDTEHHKQLDTIYEEIVNTKICLANGLVIQKNCGNNSG FT QPSTVVDNTLALMTSFLYAYARLTVDDTFELMDENFVFVCNGDDNKFAMSPSFMAKFGC FT DFSPFLSELGLTYEFDEATEDICENPYMSLTMVRTSFGIGFSLSIERIVAILQWSRAGG FT VLHAYLSGIAALFESFNTPKLFNLVHTYLLWLVTEHEEELFSMMELKDMFMPLPTREQI FT ALLHYVGTGPIVEETYLQSGKDEPDPIVPPVSDTDLTNLAAAPPANTRSRAVVPRGTSD FT WNLPEPKMRMLGFKSKINIETLADVPEGYMNTFASVATETQRRKWEETTRGDFGITDDE FT KWEKLLIAACIYFADNGTSPNFDEELTMEVNGGLNSIKEYPVRPFVVRAKKISTLRRIF FT RCYSIETKLMFVKLRPVPQWAIKHGCLDEIVFDFMIPDQFTSRTALETLKQTKLAAIGV FT GTSNSLLTSEQTNMRTTETRRRNDYDGHEALLR" XX SQ Sequence 7273 BP; 2060 A; 1907 C; 1604 G; 1702 T; 0 other; aaaaataaaa caaaactaca acccaataca aacaacgaac aacaatcaac gaattcaaaa 60 ctcatcaaag catcatcgct cactagcgac aattcaaacg aactcaacaa caaaccaccc 120 ttcgaccaaa cgaactccaa ccatcaagat ggaagagttc attcccgaag tgttctacca 180 gaaccaggtt caaagtctca agaaaattct taaatcctgg aaacgtggca cttccattta 240 cgcgtatctt gctcgcgagc aagaggtcct agccttcctt gtgctgagtc ctgcgcacat 300 tgcaaagttg aacaaactac tcactgagga gtctgcacga tgcgctctac ttgcccagaa 360 ctgtgaaacc atcgaggctc tagccgttgt gcgacaagcc ctgcagggag tcacgttaca 420 ctttggtgac aatggcatgg agaaaggctg gctgcacatg atgaaagcac ttgacgcgtg 480 tcttgatgaa agctttagcg agaacgccgc tgcgctcaag aaaagcatcc aggcggttgg 540 tcacaagctc attgcggcaa aaaatcgcat cgaaagctgc gagcgatctg taaatcacct 600 tacaacgttt caatttgctc gcgaatatgg cttaagtacc acatacttcg aaaaattgtc 660 caatttcggt gggcatattc gaagttttgt gtggtccagc gactcaggag aaatttccca 720 aaggccaagg aaaagaaatc atcacatacg acgcgcattt cggcattcac gagctactac 780 tggggtgagt tttggtgcaa ctgcatctgg ctcctctgtt ccctctggtc tccccgcacg 840 ctggtgcttt aattccgcag ttttcatttg gagtctatgt ggtgtcctaa atttatccat 900 ggttgttttg caattcactc ttaagcgtca ttttggtaaa ttctacttcc gctatattat 960 gtctggtgtt ttagctattt gtgccgtttg ctgtgtgcat cttaaaaatc gaaaagggcc 1020 tatacttcaa gcctctcaaa aagataaacg tttcatagga atattagcct tctgtatcac 1080 tgtcatatat atgtttgatg tggatcttgc cgactcgctg agtaacaacc tccataagat 1140 atcccgtctc gtgaaccttt tcttggatga caaccgcgga ttcgcaacac ctgctcttga 1200 caatctaacc gatttcacaa caatccttca aagtggaaca tcgagtgacg acctaaagat 1260 tgttcaggac acgttggccg ttgttttaca agtcgacgat gaggacgcaa ctcaagatga 1320 cgcaatatac gattccgacg ggctccagac tttcaagcaa tgggtctctc acaaccaact 1380 agccggaatg caactcgcac gtccactaca atacccgtgc tccaacacct atggcctaac 1440 tgcagacaat gtcgcggaac tagccactag catggcacag gaagcgaagc agtggtcgca 1500 agttgtcggc cacactggct ccgggaagtc cacacggcta ccaactgcat acgccaactg 1560 tctcaaaggt ttggctgggc gaaagaaaaa tgtccttgtt tgcgaaccca ctagagctgc 1620 aactgttaat gtgaccagcg gcatttcgca aaatttcggc aggcttgttt acggacgaca 1680 tgagggttgg agcaaccttg gcgacaagac aatacaagtc atgacatacg gttccgcact 1740 cgcagcatgg aaagtcgaca acaaattctt aagccagttt gacgcagtgt ttcttgacga 1800 atcccacctc ataaccacgc atgcccttgt tttcgaaagc atctgccagg aagccactaa 1860 cgttcgcaag ttctatgtgt cagcaacacc ccgcgatggc aagaaatgcc cagaagccgt 1920 acgcagatat gaaatcaaaa ccgtgaaatc cgagtgcagt agtatcgaca ctttcgttcg 1980 gagccaggag aaggaaaact cgctttatgt tctcaaacac gacaccgtac tcgtctttct 2040 tgctggtaag gctgagtgcg atagagcagc aagcaactgg aacaagctgt actcgaccaa 2100 catgtacgca tactccctga caggcgataa cttcacagtg gcatatgaga atatcgtcac 2160 acgcatgctc actgatcgta tcatcgtttt ctgcaccaac attctggaaa ccggtgtcac 2220 cctcaacgta gattgcgttg ttgactttgg attcactatg cgtcccgagc tcgatcttgt 2280 cgacaaatcg ctcaccttaa tgcgacgccg agtcactgag aacgagcgcg cacagcgcat 2340 tgggcgtgca ggaaggctca gaaccggaca tgcaatctgc attggcaatc ccgagacgcg 2400 ccacgaccta gttccacccg aaactctcta cgaggcagct cttcttagct tcgtgcatgg 2460 cgtgcaattc tacatcaatg agcatttcga gaatgcctgg attgaaggtg tcacaaagtc 2520 ccaagcctct gtaatgacgc aattcaaact ttctcccttc cttatgcgtg acattgttcg 2580 cgatgatggc gcaataccac tatcactcca caagatactc aaggattaca cacaccgcaa 2640 caccgatctg ataggaacaa aactctccgt catgtcgcat gtctataact catggcctct 2700 atatcgtaca gtgcaccaat ccatcttccg tggagattcc aatgttccac aagcgctcaa 2760 acacgcacgc gtccctttca acgtcagcac cgcccatgat ttcccatggg aaaatttcgc 2820 acaggcatgt ctcgaattcc agccacgtgt tcttcaggtc ttcagtgaca gcagcagcac 2880 ttcgcgcata atcaacctcc agatcggtaa gatgcacatc gttaattcca tggaagaagt 2940 caagataaac ataaacagct accagcgctc tgcagaaaac ctacgctcag tcaaagacag 3000 ctttgagagc tccatctttc gaacaaaact gctccgtgga aatccaactg ggaagataac 3060 taagcgcatt gagactcttc ttgacaacgt gcgagtgctg caacaggtgc acgcgaagtt 3120 agagatcatc gcatactcag gtggagagaa actcaacatg gacaagaaat cagtcgacga 3180 acttaatgag attgtcgaac tccagagcaa gaattcactc actgccgaga ggctagcacg 3240 catgattgca tctaacaaga accccgctcc aatttctgtt aacctgtttg ctgaaagtgg 3300 cggacaaatg ctcggaggtc tcctagttat ggttgccgcc tggttcatgg acctcgtttt 3360 ctgggtttcc ccaaggaaac aggatgacat caccattgaa ggcaaaggta gggcatacaa 3420 ccgtgacaag cgcatggggt atgattccta cgaggaggac gaagtccgca acaagattaa 3480 caagaagttc aaagaacgca gcacaagatt ctccaacgac tccaagccgg aaacaagctc 3540 aaagtaccgg aatctgaagc aagaattcgt gaacttctat gatcttaaga ctgatgctaa 3600 cgtactacaa gccgtgttca ccgcgatgga tggagccgtt cttcttcaaa cggaagctcc 3660 aatggcggac attgaccgtg ttaacagact actccaggaa catttttcgg atagcgacag 3720 ccaagctgta cacgaaggtc tcaacaccat ggttaagtgc cacttaacca tgaaagacgg 3780 gagacagttt gagctcgaca tggaatggca cgatcccgaa actgttgcta agcttggagg 3840 cgaagttggt ttcagaatga acagagacga gctacgccag gttggagcca cacggtacat 3900 caacccaaaa gcgcaaacat ctgcagcgac acttgagggc atgaccatga aacccatgag 3960 ttctttcact attgatagtg caaagatggt tggcttcatc aagaccgcga aagacacact 4020 caactgcatt ctgtatggcg attggatcat agctcctgca catatacagc agggcgaagg 4080 ggacataaca ttcatcttcc aacacacaca gttcacaacc acaaccgagc gcttgtctag 4140 ttacggaatt cgacaattca aaggtcttga ccttgttgtc attcgacgtc ctcagcagat 4200 acgcgcggtc aagaaggaca tgcgcgctag cattcttgac acacccactg aaatacagat 4260 gttgtactta tcaaccaaag gcggcaagta ccaagtgtcc acgtccgctg tgtgcttccc 4320 acattacaac aaccgatggg gacatgtcat ttcaacggct gagggcatgt gtggctgcat 4380 tgtgttcaac cccaccacga accatattgt ggggattcac gtctcctaca atgacacgcg 4440 aagaaggaat gagtttcaag ctttcacaag tgatgttctc acaacgatca atgcacctgg 4500 acacgagata ccatttagcc catgggtctt cgattggaag ttttgcgggt acacaacaaa 4560 accacgaaac ttgcagagcg caccaaacac gcttgaacga ctcaacatca acgccacagg 4620 ttttggtttc aaactcaacg cgcaggagat caaacctgcc atgcttcgct ccacagaatc 4680 attctccagg gagtttccgg acacacagtt taagctcatc ggagaggtga agaagggact 4740 cattgataaa cacacgatta caggagagaa cccttatttc cttgaattcc tgaacacatt 4800 caaaccatac caatgggtgc aagctttcat ggacgagtac gcaccctcca tccttgccta 4860 cgacgcgtac ttcaaggact tgaagaagta tgataggccg ccgcacgcaa gtgtgttctg 4920 taaggacaca ttgactaaag ccaaacacaa gatgattaaa attctcgaag aggcaggtat 4980 gggaaggacc ctagtacgaa ccaccgagca agtcttgctt gacatggcgt ggaccacctc 5040 tggtggaccc ctataccatg gcaagaagat cgacattgtg caacacttat ctgatgatga 5100 gcttgtgcaa ttcagtgaag cctgccaaca ggctctcatc actggaacgc tagatggagt 5160 ctggaacgga tcactcaaag ccgagctacg ctcttcgcag aaaatcttcg agcggaaaac 5220 ccgtgttttc actgccgccc ccataacaag cctaattgcg atgaaatact acgtggatga 5280 tttcaacaaa caattctaca aaactcatct caaagcacca cacacagttg gcatcaacaa 5340 gtttaaccgc ggatggcaga atctctatga gaagcttaac aaacctggat ggacgcatgg 5400 gagtggggac ggctccaggt tcgacagctc tattgacgga tttctcttcg atgttatcaa 5460 agacattcga aagcacttca tggacacaga acaccacaag cagcttgaca caatctacga 5520 agaaattgtt aacacgaaga tatgcctagc gaatggttta gtcatccaaa agaattgcgg 5580 aaacaatagc gggcagccca gcaccgttgt cgacaacaca ctcgcactca tgacttcttt 5640 tctttacgcg tacgcccgac taactgtaga tgacaccttc gaactcatgg acgaaaactt 5700 cgttttcgtc tgcaatggcg acgacaacaa gttcgccatg tcacccagct tcatggcaaa 5760 gttcggatgc gatttttccc cattcctttc tgagctaggg ctaacctacg agttcgacga 5820 agccaccgaa gacatttgtg aaaaccccta catgtctttg acgatggttc gaacctcgtt 5880 tggcatcggc ttctctctct ccatcgaacg catcgttgca atcttgcaat ggagccgcgc 5940 tggtggagtc ctgcatgcct atctctctgg cattgccgct ctcttcgaat ccttcaacac 6000 acccaaactc ttcaacctcg tgcacacata cctcctctgg ctcgttacgg agcacgagga 6060 ggaactcttt tcaatgatgg aactcaagga catgttcatg cctctgccca ctagggaaca 6120 gatagccttg ttgcactacg taggcactgg gcccatcgtg gaagaaacat atctgcaatc 6180 aggaaaagat gaaccagacc ccattgttcc tccagtttct gacactgatc tcacaaactt 6240 ggctgcggca ccacccgcca acacaaggtc gcgcgccgtc gtcccccgtg ggaccagtga 6300 ctggaatttg cccgaaccca agatgcgcat gctaggtttc aagtccaaaa tcaacatcga 6360 aacgctcgcc gatgtccccg aagggtacat gaacaccttt gcgtccgttg caactgaaac 6420 gcaacgtagg aaatgggaag agaccacgcg tggtgatttt ggtatcaccg acgacgagaa 6480 gtgggagaag ctgctcattg ctgcttgcat atatttcgca gacaatggca cttcaccaaa 6540 cttcgatgaa gagctcacta tggaagtcaa tggcggtctc aactccatca aagaatatcc 6600 cgtccgccct tttgttgtca gggctaaaaa gatctccaca ctgcgcagga tttttcgttg 6660 ttactccatt gagacgaaac taatgttcgt gaaactgagg cccgtgccgc aatgggccat 6720 aaagcacggg tgccttgatg aaatcgtctt cgatttcatg atcccagacc agtttacttc 6780 cagaactgca ctcgaaacac tgaagcaaac caagcttgcc gccattggtg ttggcacaag 6840 caattctctc ctcacctccg agcagacgaa catgagaacc actgaaaccc gaaggcgcaa 6900 cgactatgat ggtcacgagg cgcttctccg gtaggtatct catgcggttt cattttcttt 6960 tcagcagtgc atttaaatac gcttttaatt acatcaagcg tcaagagttg ttcccgcttg 7020 cagctaatcc ttatggggtg gcactttgtg ttatgcaatg gacaattcaa tgacgcaatc 7080 aaccatcatt ggttggtgac aacgcagcaa gttctttctt ttcacatcaa gcgacctgca 7140 catcgcaccg cttacagcta atcctacctg agggtggcac tctgtgttat gtaatggaat 7200 gtgcaatctc gcaaccaacc gtcattggtt gatggtgcgg ctaaaacccg cactcctgta 7260 taccggaaag gtt 7273 //