ID AF530056; SV 1; linear; genomic RNA; STD; VRL; 2016 BP. XX AC AF530056; XX DT 02-JUL-2003 (Rel. 76, Created) DT 02-JUL-2003 (Rel. 76, Last updated, Version 1) XX DE Turnip mosaic virus strain R polyprotein precursor, gene, partial cds. XX KW . XX OS Turnip mosaic virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2016 RA Chen C.C., Chao C.H., Yeh S.D., Tsai H.T., Chang C.A.; RT "Identification of Turnip mosaic virus as the causal agent of calla lily RT exhibiting foliar yellow spotting and striping"; RL Unpublished. XX RN [2] RP 1-2016 RA Chen C.C., Chang C.A.; RT ; RL Submitted (18-JUL-2002) to the INSDC. RL Plant Pathology, Taiwan Agriculture Research, 189 Chung-Cheng Road, Wufeng, RL Taichung, Taiwan 413, ROC XX DR MD5; 2ef7449dde0bc1db0ebdf0eb1f286d3a. XX FH Key Location/Qualifiers FH FT source 1..2016 FT /organism="Turnip mosaic virus" FT /strain="R" FT /mol_type="genomic RNA" FT /isolation_source="radish" FT /db_xref="taxon:12230" FT CDS <1..1806 FT /codon_start=1 FT /product="polyprotein precursor" FT /note="contains NIb and coat protein" FT /db_xref="GOA:Q7TCL3" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q7TCL3" FT /protein_id="AAP80806.1" FT /translation="MIFNNQFYDHNLRAPWSVGMTKFYCGWDRLLESLPDGWVYCDADG FT SQFDSSLSPYLINAVLNIRLEFMEEWDIGEVMLRNLYTEIVYTPISTPDGTLVKKFKGN FT NSGQPSTVVDNTLMVILAVNYSLRKSGIPNELRDSIIRFFVNGDDLLLSVHPKYEYVLD FT TMADNFRELGLKYTFDSRTREKGDLWFMSHQGHKREGIWIPKLEPERIVSILEWDRSKE FT PCHRLEAICAAMIESWGYDKLTHEIRKFYAWMIEQAPYSSLAQEGKAPYIAETALRKLY FT LDKEPAQEDLTQYLQAIFEDYEDGAEVCVYHQAGETLDAGLTEEQKQAEKERKERERSE FT KERERQRQLALKKGKNAAQEEGERDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVAL FT NLDHLILYTPEQTDLSNTRSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGT FT SPNINGMWVMMDGDDQVEFPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPR FT YGLQRNLTDMSLARYAFDFYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTT FT VENTERHTTEDVNRNMHNLLGVKGL" XX SQ Sequence 2016 BP; 627 A; 407 C; 506 G; 476 T; 0 other; atgattttta ataatcagtt ctacgaccac aaccttagag ctccgtggag cgtaggtatg 60 acaaagttct attgtggttg ggaccgcttg ctagagtcac taccagatgg ttgggtttac 120 tgcgatgctg atgggtcaca gttcgatagt tcactatcgc catacttgat taacgcagta 180 ctcaacatcc gcttggaatt tatggaagag tgggacatag gggaagtaat gctaagaaac 240 ttgtataccg agattgtgta tacccctatc tcgacaccag atggcacact cgtcaagaag 300 ttcaaaggga acaatagcgg acaaccgtca acagtcgtgg acaacacgct catggtcata 360 ttagcagtca actactcgct caggaagagt ggaattccaa atgaattgcg tgatagcatc 420 atcaggtttt tcgtcaatgg ggatgacttg ctgttaagcg tacatccaaa gtacgagtat 480 gtccttgaca ctatggcgga taatttccgt gaactgggct tgaagtatac cttcgattca 540 agaaccagag aaaagggtga cctttggttt atgtcgcacc aaggacacaa aagagaaggg 600 atctggatcc ccaagctgga accagagcga atagtatcga tcctagagtg ggatcgatca 660 aaagagccat gccaccgact tgaggcaatc tgcgcagcaa tgattgaatc gtggggatat 720 gataagctga cccatgaaat acgcaagttt tatgcatgga tgatcgaaca ggctccatat 780 agctctctag cacaagaggg aaaagctcct tacatagcgg aaacggcact aaggaaactt 840 taccttgaca aagaaccagc tcaagaagat cttactcaat acttacaagc aatcttcgaa 900 gattacgaag atggtgctga agtgtgtgtt tatcaccagg caggtgagac gcttgatgcc 960 ggtctaacag aagagcagaa gcaggctgag aaggagagaa aggagagaga gagatcagag 1020 aaagagcgag aaaggcaaag acagctagcg cttaagaaag gcaaaaacgc agcacaagaa 1080 gagggcgaac gcgacaagga agtaaacgct ggaacctctg gaactttcag tgtacccaga 1140 cttaagagtc tgacaagcaa gatgcgcgtg ccaagatacg agcaaagagt agctctaaac 1200 ctcgatcatc taatcctgta tacgccggag cagacggatc tatccaacac acgttcaacg 1260 cgaaagcagt ttgacacatg gtttgaaggt gtaatggctg actacgaact gacggaggac 1320 aaaatgcaaa tcattctcaa tggtttaatg gtctggtgca ttgagaacgg aacctccccg 1380 aatataaacg gaatgtgggt gatgatggac ggcgatgatc aggtggaatt cccgatcaaa 1440 ccgctcattg accacgccaa acccacattt aggcagataa tggcccattt cagtgacgta 1500 gctgaagcgt acattgaaaa gcgtaaccaa gaccgaccat acatgccacg atatggtctt 1560 cagcgcaatt taaccgacat gagcttagct cgatacgcat ttgatttcta tgaaatgact 1620 tctagaactc caatacgtgc gagagaagca cacatccaga tgaaagcagc agcactgcgt 1680 ggcgcaaata acaatttgtt cggcttggat ggaaacgttg gtacaacggt agagaacacg 1740 gagaggcata cgaccgagga cgttaatcgg aacatgcata acttacttgg cgttaagggg 1800 ttatgaagtt gtatgctggt agactataag tatttaagtt tactcgttag tattctcgct 1860 tatgggaaat atgtaagttt gttaaagcag ccagtgtgac ttcgtcatgt gtgttgttgt 1920 tactttctat attttcgccg aacattttat tggtgttagc gcatgttgtg aggatcatcc 1980 tcgattgcct taacatttga taggatgcaa gggaca 2016 //