Dbfetch
ID AF527633; SV 1; linear; genomic RNA; STD; VRL; 4975 BP. XX AC AF527633; XX DT 02-JAN-2003 (Rel. 74, Created) DT 06-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Coniothyrium minitans mycovirus putative coat protein and putative DE RNA-dependent RNA polymerase genes, complete cds. XX KW . XX OS Coniothyrium minitans RNA virus OC Viruses; Riboviria; Totiviridae; Victorivirus. XX RN [1] RP 1-4975 RX DOI; 10.1016/S0168-1702(03)00064-9. RX PUBMED; 12727341. RA Cheng J., Jiang D., Fu Y., Li G., Peng Y., Ghabrial S.A.; RT "Molecular characterization of a dsRNA totivirus infecting the sclerotial RT parasite Coniothyrium minitans"; RL Virus Res. 93(1):41-50(2003). XX RN [2] RP 1-4975 RA Cheng J., Jiang D., Fu Y., Li G., Peng Y.; RT ; RL Submitted (06-JUL-2002) to the INSDC. RL Department of Plant Protection, Huazhong Agricultural University, Shizishan RL No.1, Wuhan, Hubei 430070, P R China XX DR MD5; 6efaec582a476d3c9a28e9feaae8e954. DR EuropePMC; PMC3597494; 23516364. DR EuropePMC; PMC3659425; 20976609. DR EuropePMC; PMC5086604; 27690081. XX FH Key Location/Qualifiers FH FT source 1..4975 FT /organism="Coniothyrium minitans RNA virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:210827" FT CDS 62..2389 FT /codon_start=1 FT /product="putative coat protein" FT /note="CMMV-CP" FT /db_xref="GOA:Q8AZ67" FT /db_xref="InterPro:IPR008871" FT /db_xref="UniProtKB/TrEMBL:Q8AZ67" FT /protein_id="AAO14998.1" FT /translation="MASSTRFLASAASPLTGTVAGISAGTIGQDNQYRRYRAGLTIGVH FT EHGSYTQARRSIFYEVGRRYGRLTDALGPHGAEAVPIDASVRINAAEAANFEGFARKFS FT NFSPQWLTMDLCGIAERLAKGVAAQSVYGGVNIVNLRGHLPVRVVALGTLDSPQTASNN FT SVFIPRTVDTVGNDHVFAVLAAAANGEGAAVSTDVLRLDANTNEPVIPAVSGPSLASAC FT IEALRIVGANMEASGAGDLFAYAVTRGIHAVVSVVAHTDEGGYMRALLRHGRFRVPYGG FT INQALRDYPALPAAGALATHVISSWVDAIALKTAAVVAHSDPCVIASGGLYPTVFTSSQ FT GDITPPGTDEGDSPTDADARAIGRQIAGDLGRFAPTFMAGLLRIFGLQTSSQVAEAHFC FT TVGGMYLSENVDRHLRHKTVAPYFWVEPTSLIEVGFLGSTAETAGFGSLVTPGDQAMIP FT TFERVREMDRGRNANFSTIAFKMRTARTSGLVCAHAAAPTPLAGLKLYQFDQDSLILAG FT DQGPTNGDVPTKHVAADPLSSYLWVRGQSAIPAPAEMINTQASYAAKYKNITWDDDFEG FT TVSDLPKAWELEHDTMWRVTVPTAFSVTGPSNYLDREARRARSRAAISLAQAALRARAY FT GEANSPVIDVSNVPPTWDDERAPVVVFSDEIHTSDPGTAQGRGIGNPPDVTAPVTGAPL FT VPIPHHQPLRGPPFPRGAGVMGGGVAPPPPAGPGGPPAGPGPNPPPPPPPGGDGGDDAA FT AAAAVAGGDVHGAAGALPAPQV" FT CDS 2386..4875 FT /codon_start=1 FT /product="putative RNA-dependent RNA polymerase" FT /note="CMMV-RdRp" FT /db_xref="GOA:Q8B5B7" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:Q8B5B7" FT /protein_id="AAO14999.1" FT /translation="MIGARVDERALAAGALGQYLKKLTRSQDVSRFATLSFPDQISYVF FT KPSWDSFRPTPLHRAALSFLCGEVPVQVALPYASLWRMVDYTCPVPDIVLDIKYKTRWI FT RDAGITVKRFPLKKNPAASNKVNLYLHEVGRDLSSHAPTQLNVGLQYLDWVRRQRVVYN FT DQATAFLLYEYCLACYDSRGWRHAAASLFDSDYAKGFSVFGKAVGINGSQVGAMMVETN FT VLLGRDVAPIDLVEEARKRTSMREVRAMTTAYSDDTIRRAVRTVLLRELKRSGDSYILE FT FPTLEDHWATRWQWAVNGAHSGLIYKTNPSYRPHMPGFDRLHRRAWLETISEDPRPAWD FT GRTYVSASPKLEHGKTRAIFAWDTINSLAMEHLMSTVEANWRGERVILNPGKGGHLGMA FT QRVQAARNRSGVSLMLDYDDFNSHHTTRTMQIVVEETCRLTGYPPDLAEKLVSSMEKHY FT ICVGGAYIGRSKGTLMSGHRLTTYINSVCNEAYLRIELGDDFLDKNVSLHVGDDVYLGV FT RSYQEAGYVLRMIRGSKLRMNPAKQSVGHVTTEFLRVASESRYSYGYLARAVASITSGS FT WVNELALAPLEALTNIVASARSLANRSGIADVALLLVSSTRRMAPLDSRDDTLLRELLT FT GKVALQNGPNYQSSGYYRHVAVTPKMVRRDDFGYGVLPLEATHTYLSSAATVLEIETLT FT KAGISVEEDMARASYKKSAPRDFFSAECLVTGPVLQRPCVGVEWAEMVLRRPRVTGILS FT RYPLLLLARYRLPERVVREALAAAGGDYNTPYLDYDAWGEYAHGCVIDTVMSYTDASAL FT GAKTAAGVLTSTTRMYV" XX SQ Sequence 4975 BP; 1008 A; 1527 C; 1416 G; 1024 T; 0 other; agggttccgt tgatccacct gctcaacgtc gatttcacga aagcctaacc atctgttgcc 60 aatggcatca agcacgcgtt tcctcgcgtc ggccgccagt ccgttaactg gtacagtcgc 120 gggtatctcg gcgggtacca tcggccaaga caatcaatac cgccgataca gagccggcct 180 tactatcggg gtccacgaac acggttcgta tacccaggct cgccggtcca tcttctacga 240 agtgggccgc cgatacgggc gtcttacaga cgccctaggg ccacacggtg ccgaggcagt 300 gcccattgat gcgagtgttc gcatcaacgc tgctgaggcc gctaatttcg agggctttgc 360 ccggaagttt agcaatttca gcccccagtg gctgacaatg gacctctgcg gtatcgcgga 420 gcgtctggca aaaggtgttg ccgcccagtc cgtgtacggc ggggtcaaca tcgttaattt 480 gcgtggacac ttgcctgtcc gtgtcgtggc gctcgggact ctcgactccc ctcaaacggc 540 gtcaaacaac tcggtcttca taccgagaac ggtcgacacg gtcggtaatg accatgtttt 600 tgctgtcctc gcggccgcag ccaacggcga aggagcagct gtgagtacag atgtactcag 660 gctcgatgcg aacaccaacg agccggttat tccagctgtc tccggtccct cgctggcctc 720 ggcctgcata gaggccctcc gtatagtcgg ggccaatatg gaggcgtccg gggccgggga 780 tttgttcgcg tatgctgtca cgagaggcat acacgccgtc gtttcggtcg tcgcccacac 840 cgatgagggg gggtacatgc gtgccctcct ccgtcacggg cgtttcagag tgccgtacgg 900 cggcatcaat caagctctgc gtgactaccc cgcgctgccc gccgctggcg cactcgccac 960 ccacgtcata tcgtcttggg tggatgcaat tgcgctgaag acggcagcgg tcgttgccca 1020 cagcgaccct tgtgtcatcg cgtctggtgg cctttacccg actgttttca ctagcagtca 1080 gggcgacatc accccgcccg gaactgacga gggtgattcg cccactgatg ctgacgcccg 1140 tgctattgga cgtcagattg caggggacct gggccggttc gccccgacct ttatggcggg 1200 cctgctcagg atcttcggac tccagacgtc aagtcaggtg gccgaagctc acttctgcac 1260 cgtggggggg atgtatctgt ccgagaacgt cgacaggcac ctccgccaca agacggtggc 1320 tccgtacttc tgggtggagc cgacctcgtt gatagaggtc ggtttcctcg gttcgaccgc 1380 ggagaccgcc ggttttgggt ctcttgtaac ccctggagac caggctatga ttcccacctt 1440 cgaaagggtg cgtgagatgg atcgcgggcg caatgcgaac ttctccacga tagccttcaa 1500 gatgaggacc gctcgtacta gcggcctcgt ctgcgcccat gccgcggccc ccacccctct 1560 ggcaggttta aaactgtacc aatttgatca ggacagtttg atcctcgctg gtgaccaggg 1620 gcccacgaat ggcgatgtgc cgacgaagca tgtcgccgcc gaccccctgt cctcgtacct 1680 ttgggtacgg gggcaaagcg ccatcccggc ccctgccgag atgatcaaca cccaggcttc 1740 ttatgccgca aagtataaga acataacctg ggatgacgat ttcgagggta cggtgtcgga 1800 tctgcccaag gcctgggaac tcgaacacga cacaatgtgg cgtgtgactg tcccaaccgc 1860 cttctcggtg accggcccgt ccaattacct ggatcgggag gctcgtcgcg cacgttcccg 1920 tgccgcgatc tctttggcac aggccgcact gcgcgcccgt gcatacggcg aggccaactc 1980 gcctgtcatt gacgtgtcca acgtcccccc aacttgggac gatgagcggg ccccggtggt 2040 tgtattctct gatgagatac acaccagcga ccccggcaca gcacagggca ggggcattgg 2100 caacccgccg gacgtgaccg ctccggtcac tggcgcccct ttggtgccaa tacctcatca 2160 ccaacccctc cgcggacccc ccttcccgcg cggcgctggt gtaatgggag gcggcgtggc 2220 cccccctccc ccagccggtc ccggtggacc gcccgctgga cctgggccaa acccaccccc 2280 gcccccaccc ccaggcggtg atggtggtga cgacgcggcg gctgcagctg ccgtggcagg 2340 tggtgacgtt cacggtgccg ccggagcctt accggctcca caagtatgat cggcgcccga 2400 gtggacgaga gagccttggc agctggcgct ctcggccaat acctgaagaa gctgacccgc 2460 agtcaggatg tgagcaggtt cgcaaccctc tccttccctg accaaatttc ttatgttttc 2520 aaaccgtcct gggactcttt tcgtcccacg ccactacatc gggccgcctt gtcattttta 2580 tgtggtgagg tccccgtgca ggtggcgcta ccctacgcct ctctttggag aatggttgat 2640 tacacctgcc cagtaccaga cattgtactg gatataaaat ataaaacaag atggattcgt 2700 gacgccggta taacggtgaa aagattccct cttaagaaga acccggccgc atcgaacaag 2760 gtcaacctgt acctacatga agttggtcgt gacttgtcat cacatgcacc tactcagctc 2820 aatgtcggac tacagtacct cgattgggta cgccgacaac gcgtggtgta caatgaccag 2880 gccaccgctt tccttctgta cgaatactgt ctggcatgtt acgactctcg cggctggcgg 2940 cacgcagcgg cctcgctctt cgacagtgac tatgccaaag ggttttctgt ctttggtaag 3000 gccgttggca tcaacggttc gcaagtcggt gcgatgatgg tggagaccaa tgttctcttg 3060 ggacgggacg tggccccaat agacttggtt gaggaagcca ggaaaaggac ttcaatgcgt 3120 gaggtgagag ccatgacaac cgcttactcg gacgacacga tccgccgggc ggttagaacg 3180 gtgctccttc gtgagcttaa gcgctcaggt gactcgtata tacttgagtt ccccacgctt 3240 gaagatcact gggcaacgcg gtggcagtgg gcggtgaacg gtgcacactc gggtttgatt 3300 tataaaacca acccgagtta ccgcccccac atgccaggct tcgaccgcct acaccgccgc 3360 gcctggttgg agacaattag cgaggacccg cgccctgcct gggacgggag gacttacgta 3420 agtgcctcac ccaagcttga acacggcaag actcgcgcca tcttcgcttg ggacaccatc 3480 aattccctcg caatggagca cttgatgagt acagtcgagg cgaactggcg tggtgaacgg 3540 gtaatcttga accccgggaa aggtggccac cttgggatgg cccagcgggt ccaggctgca 3600 cgcaatagga gtggagtgtc gctaatgttg gattacgacg actttaactc gcaccacacg 3660 acaaggacga tgcagattgt agtggaggag acatgccgac tcacggggta ccccccagac 3720 ctcgctgaaa agttagtctc ttcgatggaa aaacactaca tctgtgtcgg cggtgcatac 3780 attgggcgtt cgaaaggaac cctcatgtcc gggcaccgat tgacaacgta catcaattcg 3840 gtttgcaacg aagcttacct cagaatcgaa ttgggtgacg atttccttga caagaatgtc 3900 tccctacacg tcggcgatga cgtgtacctg ggagtacgct cctaccaaga ggcgggatac 3960 gtactgcgga tgatccgggg ttccaagtta cgaatgaacc cggcaaagca gtccgtgggc 4020 cacgtaacaa ctgaattctt gcgagtcgcc tcagagagta ggtactctta cggctacctg 4080 gctcgcgcag ttgcgtcaat aacaagcgga agttgggtca atgagctcgc cctcgccccc 4140 ctcgaggcgc tcaccaacat cgtcgccagc gctcgttcgc tggcgaaccg aagcgggata 4200 gctgacgtgg ctctcctcct ggtgtcaagt acacgccgta tggccccact tgatagccgg 4260 gacgacacgt tactccgcga acttttaact ggtaaagtgg ctttgcaaaa cgggcccaac 4320 taccagagtt caggctacta tcgccacgtc gctgtgaccc ccaaaatggt ccgtcgcgac 4380 gacttcggct acggtgtgtt gcctctcgag gcgacacaca cctacctcag ctccgccgcc 4440 acggtgctcg agatcgagac cctcactaag gctggcatct cagtagagga agatatggca 4500 cgtgcgagct acaaaaaatc agctcctcgt gacttcttct cagcagaatg cctggtcacc 4560 ggtcccgtcc tccagcgccc gtgtgtaggc gttgagtggg cagagatggt cctgcgacgc 4620 ccccgcgtca cgggcatcct gtccagatac cccctcctcc tacttgcccg ctaccggctc 4680 cctgagcgcg tagtacgcga agccctcgcc gcggcgggag gagactacaa caccccgtac 4740 ctcgactacg acgcatgggg tgagtatgca cacggctgtg tcatcgacac ggtcatgtca 4800 tacaccgacg catccgcgtt aggcgccaaa acagcagctg gcgtcctgac atctactacg 4860 cggatgtacg tttagataca ttgttgttgc tgtcaacaag actctcggtc ggggagtcaa 4920 caatagaaca gtgcccccac cggggggaaa tgacccccgg gatcctgcat aattc 4975 //