ID   AF527531; SV 1; linear; genomic RNA; STD; VRL; 955 BP.
XX
AC   AF527531;
XX
DT   03-MAR-2003 (Rel. 75, Created)
DT   29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE   Thogoto virus strain SiAr126 segment 6, complete sequence.
XX
KW   .
XX
OS   Thogoto thogotovirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Thogotovirus.
XX
RN   [1]
RP   1-955
RX   DOI; 10.1128/JVI.77.4.2747-2752.2003.
RX   PUBMED; 12552016.
RA   Hagmaier K., Jennings S., Buse J., Weber F., Kochs G.;
RT   "Novel gene product of Thogoto virus segment 6 codes for an interferon
RT   antagonist";
RL   J. Virol. 77(4):2747-2752(2003).
XX
RN   [2]
RP   1-955
RA   Hagmaier K., Kochs G.;
RT   ;
RL   Submitted (08-JUL-2002) to the INSDC.
RL   Virology, University of Freiburg, Hermann-Herder-Strasse 11, Freiburg
RL   79104, Germany
XX
DR   MD5; 78790da1a4f4c1029e729230f7734c4e.
DR   EuropePMC; PMC141086; 12552016.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..955
FT                   /organism="Thogoto thogotovirus"
FT                   /segment="6"
FT                   /strain="SiAr126"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11569"
FT   mRNA            <21..>935
FT                   /product="ML"
FT   CDS             21..935
FT                   /codon_start=1
FT                   /product="ML"
FT                   /note="interferon antagonist"
FT                   /db_xref="GOA:Q80A33"
FT                   /db_xref="InterPro:IPR035212"
FT                   /db_xref="PDB:5I5N"
FT                   /db_xref="PDB:5I5O"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q80A33"
FT                   /protein_id="AAO49497.1"
FT                   /translation="MASNLPVRSFSEVCCAEARAAIIQMENNPDETVCNRIWKIHRDLQ
FT                   SSDLTTTVQVMMVYRFISKRVPEGCFAILSGVNTGMYNPRELKRSYVQSLSSGTSCEFL
FT                   RSLDKLAKNLLAVHVCSDVKMSLNKRQVIDFISGEEDPTLHTAEHLTSLALDDSPSAVV
FT                   YSGWQQEAIKLHNTIRKIATMRPADCKAGKFYSDILSACDQTKELLDAFDQGKLAYDRD
FT                   VVLIGWMDEIIKIFSKPDYLEAKGVSYQVLKNVSNKVALLRESIWWVTELDGREYLFFD
FT                   ESWYLHGMSAFSDGVPGYEDFIY"
FT   mRNA            join(<21..820,901..>901)
FT                   /product="M"
FT   CDS             join(21..820,901)
FT                   /codon_start=1
FT                   /product="M"
FT                   /note="matrix protein"
FT                   /db_xref="GOA:Q77D96"
FT                   /db_xref="InterPro:IPR035212"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q77D96"
FT                   /protein_id="AAO49498.1"
FT                   /translation="MASNLPVRSFSEVCCAEARAAIIQMENNPDETVCNRIWKIHRDLQ
FT                   SSDLTTTVQVMMVYRFISKRVPEGCFAILSGVNTGMYNPRELKRSYVQSLSSGTSCEFL
FT                   RSLDKLAKNLLAVHVCSDVKMSLNKRQVIDFISGEEDPTLHTAEHLTSLALDDSPSAVV
FT                   YSGWQQEAIKLHNTIRKIATMRPADCKAGKFYSDILSACDQTKELLDAFDQGKLAYDRD
FT                   VVLIGWMDEIIKIFSKPDYLEAKGVSYQVLKNVSNKVALLRESI"
XX
SQ   Sequence 955 BP; 270 A; 221 C; 237 G; 227 T; 0 other;
     agtggaaaca ggcagtggag atggcttcca acctaccagt gaggtctttc agcgaagtct        60
     gctgtgctga ggcacgggcg gctataatac agatggagaa caaccccgac gaaaccgtgt       120
     gtaataggat ctggaagatc caccgggacc tacagtcaag tgacctcacc accactgtgc       180
     aagtaatgat ggtgtatcgt ttcatatcaa aacgggtgcc agaaggctgc ttcgccatcc       240
     tttctggtgt gaacactgga atgtacaacc caagagagct taaacgaagt tatgtgcaat       300
     ccctgtcttc aggaacctcc tgtgagtttc tgagatcatt agacaagcta gcaaagaact       360
     tgctggctgt acatgtctgc tctgatgtga agatgtccct caacaaaagg caggtgatag       420
     attttataag cggtgaagaa gatcccaccc tccacacagc agagcatcta acaagcttgg       480
     ccctggatga cagcccttct gcagtggtgt acagtggatg gcagcaggaa gcgatcaagc       540
     ttcacaacac catcaggaaa attgctacga tgaggcctgc agactgcaaa gcagggaagt       600
     tctactcgga catcttatcc gcctgcgacc agacaaaaga acttctagac gccttcgacc       660
     agggaaaact tgcctatgac cgagacgtag tgctcatcgg gtggatggat gagatcatca       720
     aaatcttctc aaaacctgat tatctggagg cgaagggagt ctcatatcag gtcctcaaga       780
     acgtcagcaa caaagtcgcc cttctccggg aaagcatttg gtgggttaca gaattagatg       840
     gaagagaata tctcttcttc gatgagtctt ggtacttaca tggcatgtct gctttttcag       900
     atggtgtgcc tggatacgaa gacttcattt actaaaaaac tgccttgatt tctct            955
//