ID AF525933; SV 1; linear; genomic RNA; STD; VRL; 7794 BP. XX AC AF525933; XX DT 29-OCT-2002 (Rel. 73, Created) DT 02-FEB-2017 (Rel. 131, Last updated, Version 3) XX DE Mirafiori lettuce virus isolate LS301-O putative RNA polymerase and 25K DE protein genes, complete cds. XX KW . XX OS Mirafiori lettuce big-vein virus OC Viruses; ssRNA viruses; ssRNA negative-strand viruses; Ophioviridae; OC Ophiovirus. XX RN [1] RP 1-7794 RX PUBMED; 12388823. RA van der Wilk F., Dullemans A.M., Verbeek M., van den Heuvel J.F.; RT "Nucleotide sequence and genomic organization of an ophiovirus associated RT with lettuce big-vein disease"; RL J. Gen. Virol. 83(Pt 11):2869-2877(2002). XX RN [2] RP 1-7794 RA van der Wilk F., Dullemans A.M., Verbeek M., van den Heuvel J.F.J.M.; RT ; RL Submitted (01-JUL-2002) to the INSDC. RL Business Unit Biointeractions and Plant Health, Plant Research RL International, P.O. Box 16, Wageningen 6700 AA, Netherlands XX DR MD5; aa76d85b9fcdad725af2e5aec6b965c9. XX FH Key Location/Qualifiers FH FT source 1..7794 FT /organism="Mirafiori lettuce big-vein virus" FT /isolate="LS301-O" FT /mol_type="genomic RNA" FT /isolation_source="lettuce" FT /db_xref="taxon:200255" FT CDS complement(134..6976) FT /codon_start=1 FT /product="putative RNA polymerase" FT /db_xref="GOA:Q8BCV9" FT /db_xref="InterPro:IPR014023" FT /db_xref="UniProtKB/Swiss-Prot:Q8BCV9" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAN60447.1" FT /translation="MDDFMKEKKINYLKTPYLRTLLESYKEDYVSLKSTIEAEKKKEAR FT EIDVNYPHILTDLIERDRDEVVSLEKIGTPSVISKINSPYTEISEENLNMIKGALYPEK FT WNRKAHLELLLFREFFLSRLDKESEISYDLSQDGSIELVKRLYNGGYASPESNVVYKFA FT NTLVSHELSKIEMNMLGTQEMKFNEDEISLDSAKKYWVLDVLEHLNKNIMMKASARENK FT RDAPDSIDFYEGKRIKTNYFGVGSSISRIEFENSLPPLVIFLSSTICGYYFEGEAKCFI FT GKAEMMNYSMYLADNLLTLSLIRTKLSTEEKKFMDYYVSLLDQPLKTRVGMGALYETTC FT LLMSDQKTLSSSMPILDNLIESIEVSTEQTEIIVEVCISVGPETCIKMSSLGKTLILAS FT TNPSKGLSKYTQRTNRDNPVNINTIRRLRSLFRQRVIISYIEKHGRVPNLISVPEDLGA FT QLEMKAAGGNYLGHMISEISRYDSVRLGKFLDTGKEMNLQSRIIDKACTKDSYDSENNS FT EKEIQYYISNDMKEVFKDPIAIDRDQYKSKERLVKVVHRKEPLMMPMKKYLNVRLSAKE FT KEQKTAARFYGIASFKLKLWISSTMEMIKRAMKLLPGQMMTMTDDERRLIMFKMSEKLL FT SKNSYSLFLDYSGHNTSQRPENTNFILEEIANMYGYYEGTPEFNELTSLSYVFSNINII FT VEDSWSDYVYISQGQLGAIEGWLGSLWGIQSQLMIEDMFMQLGMNDYIGTTYSDDSCGV FT FTQSSLDVHKLNGIIKNVQRYGEDMGLIVKLSQTQVTNGRCSMLKEHYYRGKPMDMSIK FT KMMSISPNGPKLLGDELESATLIDSGYTSSCTRASEIGIQTLLRNFRIVKLLSNSTRKL FT IEDIDNDILDERYLSSKNNYEISMKIAAKNLSKNRLSSYIPAPRSRVIEFYQFHVTNEK FT VLDLYLMIMYSPYTLYGYALTPMPDVLISGYSLSNVKRLAYLQGILGKEALIVLSKLIN FT LSGNALSYIDNPFPFVGGRKDTKLLIKPIIVKQLPKRVRNPELLKLLSLQKDKEEINFK FT TKIVEVFENCFSSRIASKFYECSIYSYISGVISKVDNSTTMKMLLGGRKMMSLINDAWM FT RNHKLRIRLNDKGIMNYNELLFARNQKVLKYKNDEEIKLNFLEIEEIPIMGKVKYSEYR FT NMMQPIFKGSTKLTEQGKKNVPPQKTFFNIAKFDRELGVDGMFEHKLIFQAYDLVRYVK FT WLMMEQERFSKKMNEKDELNLTKLCNMTLHTFTDASYHDLQEHVVCPKGGRYFHRALTS FT GFNPKTGDLSSNIYSSSYDITGIDQLLAKTGGADNNLNIQYLLIYVRICLSLLRPSPNK FT LRSLTLTNDIYFNIKDVTFSLENLNDPGSSETLYEVASRDKIQSRGKLYYNYSTYIEMD FT EDLENKFIDHVSTTRQEFIEKESAFRSVHSYMLDQMIISPELISDLILEGLIGKKMISK FT GRERFFDQFYKYYKSLNVIGAETPARSVIRGLLYEELFKVNPKSKKGELWSTEIIKHGY FT SSGFKDSLMKLFILSTSLSYRMLDKQNGKMKLIVNLNRTVQNSKSNFERIRKGECQFYI FT KDKRITEMILNSFPTLGYTYSDVHQAATDVCCEISDMEFEQVRLGSYYLKLHKAETNKI FT EGMVYGYVNFSELEINYQDLLDNLGLESALKGFETACSLMVSPEQLSSPTLSAVYPSAK FT GLLDSLIGNGFIKNSDTIIELCGGRGDFHLAMMEKEIKHTTLSREDGYNLAMRIPGMTS FT KKVSFNCFRQSDYIPYFDHSIILLDISHITEKKDCLSGILGDCITSKKKVILRLNGLNK FT FLNYEILQELKMYEMKAYLPVLESPGYVYLTIDASKKLEEEKQLDRKIFTDQLGYSRSI FT LTCSLINSISIVNLQGVISVPPKRVQDQTMEVISDEVLTEMILEEDPEYVHVNPEIKTQ FT VKTADDFKDNLYVYISEKLSIKYKNKLKFLEERLITKGKIEKSENKPKNLIELARKIRR FT KESDTIEVDYRMLINSKVNIISGVTGMDHNELVEVLNDAMSVKFNKRMSFECWKLILNL FT SANEKLIDSDLIVETINIQKFRKDVDRTINSSFEIASKAVISFKTGRIVEGLLAVARLD FT NVRRKSILNHKDKTTRNNILHYKLYMNRIMIISQSMYVEPQFPGISDSKFGKIWRSLGS FT IESDIDIERANAALDSIESLNKFFKEMNDEYFSFLNNFDLSVDNMTERIKEECQPIDAL FT VDTLTTFGLEVTEEDIARNKELDTWEKVQEYCGEEELFDAWAQEDIGDWGDE" FT CDS complement(7120..7755) FT /codon_start=1 FT /product="25K protein" FT /db_xref="UniProtKB/Swiss-Prot:Q8BCV8" FT /protein_id="AAN60446.1" FT /translation="MSQFKDKSILKSNEVPEEMFTCISGSTDTNSEMKTVISKEKNEEK FT SLVKTKNKVNRIRLFLNYHVKELPIMDHSIAERNSEMMKTVMRYKTSYREVTRFLIGSW FT LLFAEKLIPPFNMKAIIIIETDQELVDVADFEGIEILLGNNIQSCLDSFYMRFYKEDLI FT LYNTANELLLLIDNFKIPKYFAKLDMNQVRLKKIIEKKYMSLIKAGKL" XX SQ Sequence 7794 BP; 2269 A; 1445 C; 1103 G; 2967 T; 10 other; tgatatattt ttaaaatata ttttgattaa ctgaaacaaa ccagcgggtc gcaatgaccg 60 taatataaaa cttgacacag atcacacgag aaaaaagtaa gtatccaaag atgtcctaat 120 gcgaaacagt aattcattca tcaccccagt cgccaatgtc ttcttgggcc caagcatcaa 180 aaagctcttc ttcaccacag tattcttgga ctttttccca agtatctaat tctttgttcc 240 tggcaatgtc ttcttcagtt acttcaaggc caaaagttgt aagtgtatcc acaagtgcat 300 ctataggttg gcattcttct ttaattcttt cagtcatgtt atctactgat agatcgaaat 360 tatttagaaa agaaaagtac tcatcattca tttctttgaa gaatttgttc aaagattcta 420 ttgaatctaa tgctgcattt gccctttcta tatcaatatc tgattctata ctacctaaag 480 atctccaaat tttcccaaat ttactatctg atatccctgg aaactgaggc tccacataca 540 tcgattgaga tattatcatt attctattca tgtatagttt ataatgtaat atgttgtttc 600 gagttgtttt atctttgtgg tttagtatgc tttttcttct aacattgtct aatctcgcaa 660 cagccaacaa tccttcaacg atccttcctg ttttaaaaga aataactgct tttgaagcaa 720 tttcaaatga agaattaatg gttctatcta cgtcttttct aaatttttga atgttgattg 780 tttctactat taaatcagaa tcaataagct tctcatttgc tgagaggttt aatatcaatt 840 tccagcactc aaatgacatt ctcttattga acttcacgga catcgcgtca ttcagcactt 900 ccactaattc attgtggtcc atccctgtaa caccacttat aatgtttact ttgctattaa 960 tcarcattct ataatcaact tctatagtat cactttcttt ccttcttatt tttcttgcca 1020 gttcaattaa atttttaggt ttgttttcag atttttcaat ttttcctttt gtaatcaatc 1080 gttcttctaa gaacttcaat ttgtttttat acttaattga tagtttttct gaaatataaa 1140 catagagatt atctttgaaa tcatcagctg tttttacttg ggtcttgatt tcaggattca 1200 catggacata ttctggatct tcttccagta tcatttctgt taatacttca tcacttatca 1260 cttccatagt ctgatcctga accctttttg gaggaacact tatgacacct tgtaagttaa 1320 cgatggatat ggaattaatc aatgagcatg ttagtattga ccttgagtaa cctaattgat 1380 cagtgaatat ttttcggtct agttgttttt cttcttctaa tttcttactg gcgtctattg 1440 tcaaatagac gtaacctggt gattctaaaa caggaagata tgctttcatt tcatacattt 1500 tcaattcttg taaaatctca taattcaaga atttattcaa gccattgagt ctcaatatta 1560 ctttcttctt agaggttata caatcaccta atatcccact aagacaatct ttcttttcag 1620 ttatgtgtga gatgtctagt aaaatgattg aatgatcgaa atatggtata taatctgatt 1680 gcctgaagca attgaatgat acttttttac ttgtcatacc tggtattctc atcgcaagat 1740 tataaccatc ttctcttgat aaagttgtgt gttttatttc cttttccatc attgcaagat 1800 gaaaatctcc tctccctcca cagagctcaa taatrgtatc actatttttg atgaaaccat 1860 tycctatcaa tgaatccaat aaaccttttg cgctggggta aactgctgat aacgtaggag 1920 aagagagttg ttcagggctt accatcaatg aacaagctgt ttcgaaacct ttcagtgctg 1980 attcgagacc taaattgtca agtaagtctt gataattaat ttccaattcg ctgaaattca 2040 catagccata aaccatgcct tctatcttgt ttgtttcagc tttatgtaac ttgagrtagt 2100 aagaacctaa tcggacttgt tcaaattcca tatctgagat ctcacagcaa acatctgttg 2160 ctgcttggtg cacatctgaa tacgtgtagc ctaatgtagg gaatgagttt agtatcattt 2220 cagtgatyct tttatcctta atgtaaaatt gacattctcc ttttctaatt ctctcgaaat 2280 ttgacttact attttgaact gttctgttta gatttacaat taatttcatt tttccgtttt 2340 gtttatctaa cattctataa gaaagagacg ttgataagat gaacagtttc ataagtgagt 2400 ctttaaaccc tgatgaataa ccatgtttga tgatttctgt tgaccaaagt tcacctttct 2460 ttgattttgg gttcactttg aataattcct catataataa tcctctgatc acggatcttg 2520 caggagtttc agcacctatc acattaagag atttgtagta cttgtaaaat tgatcaaaga 2580 aacgctctct cccttttgat atcattttct ttccaatcaa tccttctaaa ataagatcag 2640 aaatgagctc yggacttatt atcatttggt caagcatata agaatgaaca gacctaaatg 2700 cactttcttt ttctatgaac tcttgtcttg ttgtggaaac atgatctata aatttattct 2760 ctagatcttc atccatttca atatatgtgg aataattgta gtataacttt cccctgcttt 2820 gaatcttgtc tcttgatgcc acctcatata gtgtttcaga agatcctggg tcattaagat 2880 tttccaaaga aaatgtcaca tctttaatat taaaatatat gtcattagtc aatgtcaaag 2940 atcttagctt atttgggcta ggtcttagta aagataaaca tattctaaca tatattaaaa 3000 gatattgaat attcaaattg ttatcagctc ctcctgtttt tgctaacaat tgatctattc 3060 ctgtgatatc ataacttgaa ctataaatgt tggatgaaag atctcctgtc ttaggattaa 3120 aaccactagt tagggctctg tgaaaatatc ttccaccttt aggacataca acatgttctt 3180 ggagatcatg ataactagca tcggtaaaag tatgaagtgt catattacat aattttgtga 3240 gattcagttc atctttttca ttcatttttt tggaaaatct ttcttgttcc atcattaacc 3300 atttaacata tctaaccaaa tcatatgctt ggaaaatcag cttgtgttca aacattccat 3360 ctactccaag ttccctatca aattttgcga tgttaaagaa agtcttttga ggcggaacgt 3420 ttttctttcc ttgttctgta agcttggtac ttcctttgaa gatcggctgc atcatgtttc 3480 tgtattctga gtattttact ttacccatga ttgggatttc ttcaatctct aagaaattca 3540 acttaatttc ttcatcattc ttatatttca agactttctg atttcgagca aaaagaagtt 3600 cattgtagtt cattattcct ttatcattga gccttattct taatttatga tttctcatcc 3660 atgcatcatt tatcaaggac atcattttcc ggcctcctaa caacattttc atagttgttg 3720 aattrtcaac ttttgatata actccagaaa tgtatgagta aatgctacac tcatagaact 3780 tactagcaat tcgtgaagaa aaacaattct caaatacttc tactatttta gttttgaaat 3840 tgatttcttc tttatctttt tgcaatgaaa gcaatttcaa taattcagga tttcttaccc 3900 tttttggcaa ttgtttgact attatgggtt ttatcaataa ctttgtgtct tttcttcctc 3960 ctacaaatgg aaatgggtta tctatgtaac ttaatgcatt tcctgacaga ttratcaatt 4020 ttgagagcac tataagagct tctttcccaa gaattccttg aagataagcc aayctcttga 4080 cgtttgacaa rctgtaccct gaaataagta catctggcat aggtgtcaat gcatatccgt 4140 agagagtata aggagaatac ataatcatta aataaagatc aagcaccttc tcatttgtta 4200 catgaaattg atagaactca ataactcgag atctaggtgc agggatatag gaggataacc 4260 tattttttga caagttttta gctgctattt tcatacttat ttcgtagtta ttcttacttg 4320 agagatacct ttcatcaaga atatcattat cgatatcttc gattaatttt cttgttgaat 4380 ttgataataa ttttacaatt ctgaaatttc ttaataatgt ttggattcct atttctgaag 4440 ctcttgtgca actggaagta taacctgaat caattaatgt tgctgactct aattcgtctc 4500 ccaataattt aggaccattg ggactgatcg acatcatctt tttgatcgac atgtccatag 4560 gttttcctct gtagtagtgt tctttcaaca ttgaacatct tccatttgtt acttgggttt 4620 gagacaattt aactattaat cccatgtctt ctccatatct ttgcacattc tttattattc 4680 cattaagttt gtgaacatct aaagaagact gagtgaaaac accacacgaa tcatctgaat 4740 aagttgtgcc aatgtaatca ttcattccaa gttgcatgaa catgtcttct atcattagct 4800 gtgactgtat tccccaaaga ctacctaacc acccctctat cgctcctaat tgtccttgag 4860 aaatataaac gtaatcactc caagaatctt caacaattat gtttatgttt gagaaaacat 4920 atgacaatga agtaagctca ttgaattcag gtgttccttc ataataacca tacatattgg 4980 caatttcttc taatataaag tttgtgttct caggtctttg agatgtgttg tggccagaat 5040 aatctaagaa taaagagtaa gagttctttg aaaggagttt ttcagacatc ttgaacatta 5100 tcaatctcct ctcgtcatca gtcattgtca tcatttgccc tggtagtaat ttcattgctc 5160 tcttaatcat ttccatagta gagctgatcc ataattttaa tttgaatgaa gcaataccgt 5220 aaaatctagc agctgtcttt tgttcctttt ctttagctga taatcttaca ttcagatact 5280 ttttcattgg catcattaaa ggctctttcc tgtgaactac ctttactaat cgttctttac 5340 ttttgtactg gtctctatca atagcaattg ggtctttaaa tacctctttc atatcattac 5400 taatgtaata ttgtatctct ttttcagagt tgttttcact atcataagag tctttggtac 5460 atgctttgtc tataattcta gattgaagat tcatctcctt acctgtatcc aggaattttc 5520 ctaatcttac cgagtcgtat ctcgagattt cagaaatcat atgtcctaga taattacctc 5580 ccgctgcttt catttcaagt tgtgcaccca aatcttctgg aacacttatt agatttggta 5640 ctctaccatg tttttcaatg taagaaatga taacacgctg tctaaatagt gaacgaagtc 5700 ttctaattgt attaatgttt acagggttgt ctctatttgt cctttgtgta tatttactta 5760 gtcctttgct aggatttgta cttgctaaaa tcaacgtttt acctaaggaa gacattttta 5820 tgcaagtttc tggacccaca ctaatgcata cttctacaat gatttctgtt tgttctgtag 5880 atacctcaat gctttcaatc aaattatcta atattggcat gctagatgac aaagtctttt 5940 gatccgacat caacaagcag gtggtttcgt ataatgctcc cataccgact cttgttttta 6000 aaggttgatc tagtaaactc acataatagt ccataaattt cttttcctct gttgaaagtt 6060 tcgttcttat caatgataaa gtcaacaaat tatcagccaa gtacatcgaa taattcatca 6120 tttcagcttt tcctatgaaa cattttgctt ctccttcaaa gtaataccca catatggttg 6180 atgacaaaaa gataactaag ggaggaagag aattctcaaa ctctattctt gatattgaag 6240 aacccacccc aaagtagttt gttttgatcc tcttgccttc ataaaaatct attgaatccg 6300 gagcatctct cttattttct cttgcacttg ctttcatcat tatgttcttg ttcaaatgtt 6360 ccaaaacatc caggacccaa tatttttttg ctgaatctaa actgatttcg tcttcattaa 6420 atttcatctc ttgtgtaccc aacatattca tttcaatctt acttagctca tgactaacca 6480 aagtatttgc aaatttatat acaacgttag actcagggga agcataacct ccattgtaca 6540 atctttttac caattcaatc gatccatctt gagacaagtc ataagagatt tctgattctt 6600 tatctaaacg tgaaaggaaa aattcacgaa aaagaagtaa ttccaaatga gcttttcgat 6660 tccatttttc tggatacaaa gctcctttta tcatattcag attttcttcc gagatctcag 6720 tatatgggct attaatcttg ctgattactg agggagttcc aattttttcc aaagaaacta 6780 cctcatctct gtctcgctcg atcaggtcag tcaagatatg tggataatta acatcaattt 6840 cccttgcttc tttcttcttc tcagcttcaa ttgtgctttt gagactcaca tagtcctctt 6900 tgtaactctc taacaaggtt ctcaagtaag gagtcttcaa gtaatttatt ttcttttcct 6960 tcataaaatc gtccattgtc aaagtctgat ataggagtac acttattatt aagaagattg 7020 ttatgatttt tgatgtcgct atcttttctt ttcaatttat acttgggtaa gttctcactg 7080 gttttgtttt ttattaaaac ttatgttttt attaaagcat taaagttttc ctgcctttat 7140 caaagacatg tacttcttct caattatttt cttcaatcgt acttgattca tatctaattt 7200 agcaaaatat tttggtattt tgaaattatc aatcaacagt agcagttcgt tagcagtgtt 7260 gtaaagtatc aggtcttctt tgtagaagcg catataaaat gaatccaagc aagactgaat 7320 attgttccca agtaagatct ctattccttc aaagtcagca acgtcgacta attcctggtc 7380 cgtttcaatt attattattg ctttcatgtt aaagggtgga atcaattttt ctgcgaagag 7440 caaccaagag cctataagaa atcgggtaac ctccctgtaa ctagttttgt atctcatcac 7500 tgttttcatc atttcagaat ttctttcagc tatgctatga tccataatag gtagttcttt 7560 aacatgataa ttcaaaaaaa gtctgattcg atttacttta ttcttagttt tcactaggct 7620 cttttcttca ttcttttcct tactgattac tgtcttcatt tcactattag tgtcagttga 7680 tccagaaata caagtgaaca tttcttccgg tacttcgttt gacttcaata ttgatttgtc 7740 tttgaactgt gacatatttc ttttgagaac ttgttatatt tttaaaaaat aatc 7794 //