ID AF521806; SV 1; linear; genomic RNA; STD; VRL; 3813 BP. XX AC AF521806; XX DT 12-AUG-2002 (Rel. 72, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Rice black streaked dwarf virus segment 2, complete sequence. XX KW . XX OS Rice black streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3813 RA Fang S.-G., Yu J.-L.; RT "Complete sequence of rice black-streaked dwarf virus genome segment 2 in RT maize in Hubei"; RL Unpublished. XX RN [2] RP 1-3813 RA Fang S.-G., Yu J.-L.; RT ; RL Submitted (14-JUN-2002) to the INSDC. RL Biochemistry and Molecular Biology, State Key Laboratory for RL Agrobiotechnology, 2# Yuanmingyuan West Road, Beijing 100094, China XX DR MD5; c5e155f2803c5a91eb5558f71143b165. XX FH Key Location/Qualifiers FH FT source 1..3813 FT /organism="Rice black streaked dwarf virus" FT /segment="2" FT /host="maize" FT /mol_type="genomic RNA" FT /country="China:Hubei" FT /db_xref="taxon:10990" FT CDS 47..3727 FT /codon_start=1 FT /product="unknown" FT /db_xref="UniProtKB/TrEMBL:Q8JQ07" FT /protein_id="AAM77688.1" FT /translation="MNSEEKRKKNANQNEDENKEPDKEERQEESKDEKKKNQSETEQTS FT SPDPKLINDQEGITNDSRPEEITYQSGNTIQAKTALTVEAIMNIQGHLKQSDQKLVDEQ FT TSQYLTYLTSNVPAYTTTFAITACSDFQLVPFYRTIDYTEDTSQQFPSLFCFNTFVNQY FT YDTDMTTFESKRYFEIFKDHPALLRSSETFPVNAYKVSVGWNGNSFAPEITDPTMIGDV FT SLIKNVSYVGVHSSDNYKDRKMFSRLKTFLEIAANCNLVLKGCRTKPLSIEYDNTRISK FT KLAGKKILYNDRAHIIFNGIYHAVTPFMNKINDMLMDGNTEIDFEKIYKFGRDVEKRIN FT TYDMICRGYGNMDQFSSYLINLATQRICDNRMTANHYKTLMAANYPNRVSMHVFDTMID FT DLLFVYCPTEEDWKFCMFVIMIDKNIRSLIMNKSLSLMTSRNLFGQNDIGVKLTTLINN FT KNNSPTSREAVTYFMNVLAGGNVESFCQLLTAEMYARFIDFKVENTYVETEYLDILVLL FT EVLFAFLITPRLAWWNSHRFGRTLFNLMYTFCNDEWNKWEGEFGVFVKLQRGAWNKVNI FT SIDHYDLNDLLDGVVFSFLVQRQYTQKQLSDYPFISSIYTLIAPLGEYVNLTRKINAKY FT PFFETVVRGYLPCSAEDYKAASMINDVNTRVNAIGAAVHTVTKNYFSHNTVKTSVKESY FT NTLLNTIRIASNNLGLLMHYTVAPMLKTMYDSFLFVCDGFDKASPWKRPRMISYSGYNV FT LQDTGNQNADLINLLKGKGITVPLTPLHCFSKLYTYIAIGVHGVCRNDTVTTTGSFLSR FT NFYDPNTINILPFDGQEITDLALKIVGHSKRINTVFSIFNYLHKESESDILATVRERLA FT AFWTTSNGRAVLNEITKTFNCPVERYFEHENAFYTMDSDPRVYHPTLYTSDANGNIDPV FT QPATCAVHKKYKYGDEYLENMLKVISHVMFDDELPLFRQVEGLAFGYYSSSTASPTDFF FT NVENDTEYFTINLDETPGVFRTTGTDGFSVQLAFTKDNVNHEYINPLSNAIPKIKFILK FT RLGNMNEHFVIFMKRMIDTKRHMVILTDVVVDYNIVTLSNWKDFKISEENVFDQFVLNR FT DLNNIQLNFYDTRFIIQNRTDELLDRYIYLSYRNITALKDFVVMGGIFGNPNQAINKLT FT DIDKDVYCFGERNGQTSKYFISKRDKIKGSTVNFNNHFTYLGPKSETRLPILDIRVSSQ FT L" XX SQ Sequence 3813 BP; 1282 A; 623 C; 669 G; 1239 T; 0 other; aagttttttt accggaccct agaattcacc caagatcaag gacgaaatga attctgagga 60 gaaacgaaaa aagaacgcta accaaaacga agacgaaaat aaagaacctg acaaagaaga 120 gcgacaagaa gaatcgaaag atgaaaagaa gaaaaatcaa tccgaaacag aacaaacgtc 180 atcacccgac cctaaactta taaacgacca agaaggtata accaatgact caagacccga 240 agaaattact tatcagagtg gtaacacaat tcaagctaaa acagccttaa ctgttgaagc 300 gataatgaat attcaaggac atctcaaaca atcagaccag aaattagttg atgaacaaac 360 cagtcaatat cttacttatc taacttcaaa tgttcccgct tacacaacta cttttgccat 420 tactgcttgt tcagactttc aactggtacc tttctatcga accattgatt atactgaaga 480 tacgtcacaa caattccctt cattattttg ttttaatact tttgttaatc aatattatga 540 tactgacatg accactttcg aaagcaaaag atattttgaa atttttaaag atcatcctgc 600 tttattaaga tcaagtgaaa catttcctgt taatgcctat aaagtcagtg ttggatggaa 660 tggaaatagc tttgctcctg agattacaga ccccacaatg atcggagatg tatctttaat 720 taaaaatgtt tcttatgttg gtgttcacag ttcagacaat tacaaagatc gaaaaatgtt 780 ttctcgactg aagactttcc ttgaaatagc tgctaattgt aatttagttt tgaaaggttg 840 tagaactaag cccttatcca tagaatatga caatactcgc atatccaaaa aattagctgg 900 aaagaagatt ctttataatg accgagcgca tataatattc aatggtattt atcatgctgt 960 tactcccttt atgaataaaa tcaatgatat gttaatggat ggtaacacag aaattgattt 1020 tgagaagatt tacaaatttg gacgtgacgt tgaaaaaagg attaacactt acgatatgat 1080 ctgtcgcggc tatggtaata tggaccaatt ttcatcttat ttaattaatc tcgcaacgca 1140 gagaatctgt gataacagaa tgacggccaa ccattataaa accttgatgg ctgcaaatta 1200 tccaaataga gttagtatgc acgtttttga caccatgatt gacgatttat tatttgtgta 1260 ttgtccgacc gaagaagact ggaagttttg catgtttgta attatgatag ataagaacat 1320 tagatcatta attatgaata agtctttgtc attgatgact tcccgaaatt tgtttggcca 1380 aaacgacatt ggtgtgaaac ttactacatt gattaataat aagaataata gtcctacatc 1440 tcgagaagca gttacttatt tcatgaatgt tttagctggt ggtaatgttg aaagtttttg 1500 tcaattgtta acagcagaaa tgtacgctag atttatagat ttcaaagttg aaaacactta 1560 tgttgaaact gaatatttag acattctagt attacttgaa gttttatttg cttttctaat 1620 tactcctcgt ttagcatggt ggaatagtca tagatttggt cgtacgttgt ttaatcttat 1680 gtataccttt tgtaatgatg aatggaacaa atgggaagga gaatttggtg tttttgttaa 1740 gttacaacgt ggagcatgga acaaagttaa catttcaata gaccattacg atttaaacga 1800 tttattagat ggagttgttt ttagcttttt agttcaaaga caatacactc aaaaacaatt 1860 gtcagattat ccgtttatta gctctattta taccctgatt gctcctttgg gagaatacgt 1920 aaacttaact agaaaaatta acgctaaata tcctttcttt gaaactgtag ttcgtggata 1980 tttgccttgt tcagcagaag attataaagc agcgagcatg atcaatgatg taaatacaag 2040 agttaacgct ataggagccg ctgttcatac ggtaaccaag aattatttta gtcataacac 2100 agtcaagacc tcagtaaagg aatcgtataa tactttgttg aatacaatta gaattgcttc 2160 taataatttg ggactcttga tgcattatac tgtagcacct atgttaaaaa cgatgtatga 2220 ttcattttta tttgtttgtg atgggtttga taaagctagt ccttggaaaa gacctcgtat 2280 gatttcctac agtggctata acgtactaca ggacacaggt aatcaaaatg ctgatttgat 2340 caatttgttg aaagggaaag gcattactgt gcctctaact ccgcttcact gttttagtaa 2400 actttacact tatattgcta ttggagtaca tggcgtatgt cgaaatgata ctgtgactac 2460 aactggaagt tttttgtctc gtaattttta cgatcctaac actattaata ttttaccgtt 2520 tgatggacaa gaaatcactg atttagcatt gaaaattgta ggtcatagta aaaggattaa 2580 tactgtattt tccatattta actatttaca caaagagagc gagagtgaca ttttggcaac 2640 tgtgagagaa agacttgccg ctttctggac aactagcaat ggaagagccg ttcttaatga 2700 gattaccaaa actttcaatt gtcccgttga aagatatttt gaacatgaaa atgctttcta 2760 tactatggat tctgatcctc gtgtctatca tcctacttta tatacttctg acgctaatgg 2820 taacatcgac ccagttcaac ctgctacatg cgcagttcat aagaaatata agtatggtga 2880 tgagtactta gaaaacatgt taaaagtaat ttctcacgtt atgtttgatg atgaactccc 2940 cttattccgt caagttgagg gattagcctt tggatattac agttctagta ctgcttcacc 3000 tactgatttt ttcaatgttg agaacgatac tgagtatttt actattaatc tagatgagac 3060 tcctggtgtc tttagaacta caggaactga cggattcagt gtacaattag ctttcacgaa 3120 agacaatgtg aatcatgagt atattaatcc cttatcgaat gctatcccta aaatcaaatt 3180 catactgaag agattaggca atatgaatga acactttgtt atatttatga aacgaatgat 3240 tgatactaaa agacacatgg taattctgac tgatgtagtt gttgattata acatcgtcac 3300 cttgtctaat tggaaagatt tcaaaatcag tgaagaaaat gtctttgatc agtttgtgtt 3360 aaacagagat ttgaacaaca tccaactcaa tttttatgat actcgtttca tcatccagaa 3420 cagaactgat gaactgttag accgttacat ttatttgagc tatcgtaaca ttactgcttt 3480 aaaagatttc gttgtcatgg gaggaatatt cggcaatcct aatcaagcta ttaacaagtt 3540 aactgatatt gacaaagatg tttattgttt tggagagaga aacggtcaaa cttcgaaata 3600 cttcatcagt aagagagata aaatcaaagg tagtacagtc aacttcaata atcattttac 3660 ttaccttgga cctaaatcgg aaacgcgtct tccaattcta gatataagag tgtcatcgca 3720 gttgtaaaca cttttctcct taagattcga tgtgtctagc ctcttgcggt gttttttgaa 3780 ggtcatccac aaccggtaaa ttcagctatt gtc 3813 //