ID   AF511641; SV 1; linear; genomic RNA; STD; VRL; 1267 BP.
XX
AC   AF511641;
XX
DT   06-JUN-2002 (Rel. 72, Created)
DT   19-FEB-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Wheat streak mosaic virus isolate SD96 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Wheat streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Tritimovirus.
XX
RN   [1]
RP   1-1267
RX   DOI; 10.1006/viro.2001.1569.
RX   PUBMED; 12429516.
RA   Stenger D.C., Seifers D.L., French R.;
RT   "Patterns of polymorphism in wheat streak mosaic virus: sequence space
RT   explored by a clade of closely related viral genotypes rivals that between
RT   the most divergent strains";
RL   Virology 302(1):58-70(2002).
XX
RN   [2]
RP   1-1267
RA   Stenger D.C., Seifers D.L., French R.;
RT   ;
RL   Submitted (14-MAY-2002) to the INSDC.
RL   USDA-ARS, University of Nebraska, 344 Keim Hall, Lincoln, NE 68583, USA
XX
DR   MD5; ae140f212bfda9b737c22ab72d598847.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1267
FT                   /organism="Wheat streak mosaic virus"
FT                   /isolate="SD96"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:31741"
FT   CDS             <1..1134
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="coat protein cistron of polyprotein"
FT                   /db_xref="GOA:Q8JQX0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JQX0"
FT                   /protein_id="AAM48235.1"
FT                   /translation="VEDLYLTGTRTDLGEEIKECGEQYCVYESSEAATDAVLAAANAGT
FT                   GSAPSSGSTQSSLSASTASGSGSSPSGSGSGAVGGSGSGSAQTQSNNVSVMAGLDTGGA
FT                   KTGQGSGSKGTGGSFTSNPVRTGGRATDVQDQTPGLVFPAPKITTKAIYMPKTVRDKIK
FT                   PEMINNMIKYQPRAELIDNRYATTEQLNTWIREASEGLDVTEDVFINTLLPGWVYHCII
FT                   NTTSPENRALGTWRVVNNAGKDNEQQLEFKIEPMYKAAKPSLRAIMRHFGEGARVMIEE
FT                   SVRIGKPIIPRGFDKAGVLSINNIVAACDFIMRGADDTPNFVQVQNSVAVNRLRGIQNK
FT                   LFAQARLSAGTNEDNSRHDADDVRENTHSFNGVNALA"
XX
SQ   Sequence 1267 BP; 383 A; 272 C; 345 G; 267 T; 0 other;
     gttgaggatt tgtacttgac tgggactcga acggatctag gagaagagat taaggaatgt        60
     ggagagcaat actgcgtgta tgaatcgagt gaggccgcaa ccgacgctgt cttggcggca       120
     gcaaatgcag gaactggtag tgcaccgagt agtggaagta ctcaatcaag tctgagcgca       180
     agtactgcta gcggatcagg gagctcacca tcaggatcag gttctggagc agtgggtgga       240
     tcaggttctg gatcagcaca aacacaatct aataacgtat ctgtcatggc tggcctcgac       300
     acgggaggag ctaagacagg tcaaggatca gggtcaaaag ggacgggtgg ttcattcaca       360
     tcgaatcccg tgcgaactgg aggccgagca acggatgtgc aagatcagac accaggttta       420
     gtgtttccag cacccaagat cacaacaaag gccatataca tgccaaaaac tgtacgcgac       480
     aagataaaac ctgaaatgat taataacatg atcaaatacc aaccgcgtgc ggaacttatc       540
     gacaacagat atgcaacaac tgaacaactc aacacttgga taagagaggc atccgaaggg       600
     cttgacgtga cagaggatgt tttcataaac accttacttc caggatgggt ttaccactgc       660
     ataatcaaca caacgagccc agagaacaga gcactaggaa cttggcgtgt tgtgaacaat       720
     gcgggcaagg acaatgagca gcaactcgag tttaaaattg aaccgatgta caaagccgcg       780
     aagccatcac ttcgagccat tatgcgtcac tttggcgagg gagctcgagt gatgatcgag       840
     gagagcgttc ggattggaaa acctatcata ccaaggggct tcgacaaggc cggtgtgcta       900
     agcatcaaca atattgtggc agcgtgtgac ttcatcatgc gcggtgcaga tgacacacca       960
     aattttgtgc aagtgcagaa cagcgttgca gtaaacaggc tacgcggaat acagaacaag      1020
     ctgtttgcac aggcacgact gagtgcgggt actaatgagg acaactcacg tcatgatgca      1080
     gatgatgtga gggagaacac gcacagtttc aatggtgtaa acgctcttgc gtgagcacag      1140
     tagaaactac aaatccacga gtaccaggat ttgagcgaaa taacgctgcg tttcgttaac      1200
     ccttcgttgt tactaggtgt gtacttctcc acgagaggcg tacattcttg gtagctatgt      1260
     gtgggtt                                                                1267
//