ID   AF511638; SV 1; linear; genomic RNA; STD; VRL; 1267 BP.
XX
AC   AF511638;
XX
DT   06-JUN-2002 (Rel. 72, Created)
DT   19-FEB-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Wheat streak mosaic virus isolate PV106JM polyprotein gene, partial cds.
XX
KW   .
XX
OS   Wheat streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Tritimovirus.
XX
RN   [1]
RP   1-1267
RX   DOI; 10.1006/viro.2001.1569.
RX   PUBMED; 12429516.
RA   Stenger D.C., Seifers D.L., French R.;
RT   "Patterns of polymorphism in wheat streak mosaic virus: sequence space
RT   explored by a clade of closely related viral genotypes rivals that between
RT   the most divergent strains";
RL   Virology 302(1):58-70(2002).
XX
RN   [2]
RP   1-1267
RA   Stenger D.C., Seifers D.L., French R.;
RT   ;
RL   Submitted (14-MAY-2002) to the INSDC.
RL   USDA-ARS, University of Nebraska, 344 Keim Hall, Lincoln, NE 68583, USA
XX
DR   MD5; 899040813ae82c7f76a97f6c73d28164.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1267
FT                   /organism="Wheat streak mosaic virus"
FT                   /isolate="PV106JM"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:31741"
FT   CDS             <1..1134
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="coat protein cistron of polyprotein"
FT                   /db_xref="GOA:Q8JQX3"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JQX3"
FT                   /protein_id="AAM48232.1"
FT                   /translation="VEDLYLTGTRTDLGEEIKECGEQYCVYESSEAATDAVLAAANAGT
FT                   GGASSSGSTQSSQSASTASGSGSSPSGSGSGAAGGSSSGSAQTQSNNVSVMAGLDTGGA
FT                   KTGQGSGSKGTGGSFTSNPVRTGGRATDVQDQTPGLVFPAPKITTKAIYMPKTVRDKIK
FT                   PEMINNMIKYQPRAELIDNRYATTEQLNTWVKEASEGLDVTEDVFINTLLPGWVYHCII
FT                   NTTSPENRALGTWRVVNNAGKDNEQQLEFKIEPMYKAAKPSLRAIMRHFGDGARVMIEE
FT                   SVRIGKPIIPRGFDKAGVLSINNIVAACDFIMRGADDTPNFVQVQNSVAVNRLRGIQNK
FT                   LFAQARLSAGTNEDNSRHDADDVRENTHSFNGVNALA"
XX
SQ   Sequence 1267 BP; 387 A; 273 C; 343 G; 264 T; 0 other;
     gttgaggatt tgtacttgac tgggactcga acggatttag gagaggagat taaggaatgt        60
     ggagaacaat actgcgtgta cgaatcgagt gaggccgcaa ccgacgctgt cttggcggca       120
     gcaaatgcag gaactggtgg tgcatcgagt agtggaagta ctcaatcaag tcagagcgca       180
     agtactgcta gcggatcagg gagctcacca tcaggatcag gttctggagc agcgggcgga       240
     tcaagttctg gatcagcaca aacacaatct aataacgtat ctgtcatggc tggcctcgac       300
     acgggaggag ctaagacagg tcaaggatca ggatcaaaag ggacgggtgg ttcattcaca       360
     tcgaatcccg tgcgaactgg aggccgagca acggatgtgc aagatcagac accaggttta       420
     gtgtttccag caccaaagat cacaacaaag gccatataca tgccaaaaac tgtacgcgac       480
     aagataaaac ctgaaatgat aaataacatg atcaaatacc aaccgcgtgc ggaactcatc       540
     gacaacagat atgcaacaac cgaacaactc aacacctggg taaaagaggc atctgaaggg       600
     cttgacgtaa cagaggatgt tttcataaac accttacttc cagggtgggt ctaccactgc       660
     ataatcaaca caacgagccc agagaacaga gcactaggaa cttggcgtgt tgtgaacaat       720
     gcaggcaagg acaatgagca gcaacttgag tttaaaattg aaccgatgta caaagctgcg       780
     aagccatcac ttcgagccat tatgcgccac tttggcgatg gagctcgagt gatgatcgag       840
     gagagtgttc ggattggaaa acctatcata ccaaggggct tcgacaaggc cggtgtgcta       900
     agcatcaaca atattgtggc agcgtgtgat ttcatcatgc gcggtgcaga tgacacacca       960
     aattttgtgc aagtgcagaa cagcgttgca gtaaacaggc tacgcggaat acagaacaag      1020
     ctgtttgcac aggcacgact gagtgcgggt actaatgagg acaactcacg tcatgatgca      1080
     gatgatgtga gggagaacac gcacagtttc aatggtgtaa acgctcttgc gtgagcacag      1140
     tagaaactac aaatccacga gtaccaggat ttgagcgaaa taacgctgcg tttcgttaac      1200
     ccttcgttgt tactaggtgt gtactcctcc acgagaggcg tgcattcttg gtagctatgt      1260
     gtgggtt                                                                1267
//