ID   AF511620; SV 1; linear; genomic RNA; STD; VRL; 1267 BP.
XX
AC   AF511620;
XX
DT   06-JUN-2002 (Rel. 72, Created)
DT   19-FEB-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Wheat streak mosaic virus isolate IHC polyprotein gene, partial cds.
XX
KW   .
XX
OS   Wheat streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Tritimovirus.
XX
RN   [1]
RP   1-1267
RX   DOI; 10.1006/viro.2001.1569.
RX   PUBMED; 12429516.
RA   Stenger D.C., Seifers D.L., French R.;
RT   "Patterns of polymorphism in wheat streak mosaic virus: sequence space
RT   explored by a clade of closely related viral genotypes rivals that between
RT   the most divergent strains";
RL   Virology 302(1):58-70(2002).
XX
RN   [2]
RP   1-1267
RA   Stenger D.C., Seifers D.L., French R.;
RT   ;
RL   Submitted (14-MAY-2002) to the INSDC.
RL   USDA-ARS, University of Nebraska, 344 Keim Hall, Lincoln, NE 68583, USA
XX
DR   MD5; 942e33599665f82fc874a508749fc54f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1267
FT                   /organism="Wheat streak mosaic virus"
FT                   /isolate="IHC"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:31741"
FT   CDS             <1..1134
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="coat protein cistron of polyprotein"
FT                   /db_xref="GOA:Q8JQZ1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JQZ1"
FT                   /protein_id="AAM48214.1"
FT                   /translation="VEDLYLTGTRTDLGEEIKECGEQYCVYESSEAASDAVLAAANAGT
FT                   GGASSSGSTQSSQSASTASGSGSSPSGSGSGAAGGSGSGSAQTQSNNVSVMAGLDTGGA
FT                   KTGQGSGSKGTGGSFTSNPVRTGGRATDVQDQTPGLVFPAPKITTKAIYMPKTVRDKIK
FT                   PEMINNMIKYQPRAELIDNRYATTEQLNTWIKEASEGLDVTEDVFINTLLPGWVYHCII
FT                   NTTSPENRALGTWRVVNNAGKDNEQQLEFKIEPMYKAAKPSLRAIMRHFGEGARVMIEE
FT                   SVRIGKPIIPRGFDKAGVLNINNIVAACDFIMRGADDTPNFVQVQNSVAVNRLRGIQNK
FT                   LFAQARLSAGTNEDNSRHDADDVRENTHSFNGVNALA"
XX
SQ   Sequence 1267 BP; 390 A; 267 C; 339 G; 271 T; 0 other;
     gttgaggatt tgtacttgac tgggactcga acggatttag gagaagagat taaggaatgt        60
     ggagagcaat actgcgtgta cgaatcgagt gaggccgcat ccgacgctgt cttggcggca       120
     gcaaatgcag gaactggtgg tgcatcgagt agtggaagta ctcaatcaag tcagagtgca       180
     agtactgcta gcggatcagg gagttcacca tcaggatcag gttctggagc agcgggtgga       240
     tcaggttctg gatcagcaca aacacaatct aataacgtat ctgtcatggc tggcctcgac       300
     acgggaggag ctaagacagg tcaaggatca ggatcaaaag ggacgggtgg ctcattcaca       360
     tcgaatcccg tgcgaactgg aggccgagca acggatgtgc aagatcagac accaggttta       420
     gtgtttccag caccaaagat cacaacaaag gccatataca tgccaaaaac tgtacgcgac       480
     aaaataaaac ctgaaatgat aaataacatg atcaaatacc aaccgcgtgc ggaacttatc       540
     gacaacagat atgcaacaac tgaacaactc aacacctgga taaaagaggc atctgaaggg       600
     cttgatgtga cagaggatgt tttcataaac accttacttc caggatgggt ctaccactgc       660
     ataatcaaca caacaagccc agagaacaga gcactaggaa cttggcgtgt tgtgaacaat       720
     gcaggcaagg acaatgagca gcaactcgag tttaaaattg aacctatgta caaagctgcg       780
     aagccatcac ttcgagccat tatgcgccac tttggtgagg gagctcgagt gatgatcgag       840
     gagagtgttc ggattggaaa acctatcata ccaaggggct tcgacaaggc cggtgtgcta       900
     aacatcaaca atattgtggc agcgtgtgat ttcatcatgc gcggtgcaga tgacacacca       960
     aattttgtgc aagtgcaaaa cagcgttgca gtaaacaggc tacgcggaat acagaacaag      1020
     ctgtttgcac aggcacgact gagtgcgggt actaatgagg acaactcacg tcatgatgca      1080
     gatgatgtga gggagaacac gcacagtttc aatggtgtaa acgctcttgc gtgagcacag      1140
     tagaaactac aaatccacga gtaccaggat ttgagcgaaa taacgctgcg tttcgttaac      1200
     ccttcgttgt tactaggtgt gtacttctcc acgagaggcg tgcattcttg gtagctatgt      1260
     gtgggtt                                                                1267
//