ID AF509739; SV 1; circular; genomic DNA; STD; VRL; 2742 BP. XX AC AF509739; XX DT 03-JUN-2003 (Rel. 76, Created) DT 26-FEB-2004 (Rel. 78, Last updated, Version 3) XX DE Loofa yellow mosaic virus DNA-A, complete sequence. XX KW . XX OS Luffa yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2742 RX DOI; 10.1007/s00705-003-0109-6. RX PUBMED; 12898329. RA Revill P.A., Ha C.V., Porchun S.C., Vu M.T., Dale J.L.; RT "The complete nucleotide sequence of two distinct geminiviruses infecting RT cucurbits in Vietnam"; RL Arch. Virol. 148(8):1523-1541(2003). XX RN [2] RP 1-2742 RA Revill P.A., Ha C.V., Porchun S.C., Vu M.T., Dale J.L.; RT ; RL Submitted (06-MAY-2002) to the INSDC. RL School of Life Sciences, Queensland University of Technology, Gardens RL Point, Brisbane, Qld 4001, Australia XX DR MD5; afc2ed553685bc6ef78233035f1ca33b. DR EuropePMC; PMC3550763; 23637479. XX FH Key Location/Qualifiers FH FT source 1..2742 FT /organism="Luffa yellow mosaic virus" FT /chromosome="DNA-A" FT /host="Luffa acutungula" FT /mol_type="genomic DNA" FT /country="Viet Nam" FT /db_xref="taxon:207240" FT gene 48..446 FT /gene="AV2" FT CDS 48..446 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:Q7T4A4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q7T4A4" FT /protein_id="AAP47114.1" FT /translation="MKFKLHGLFITWGPLNRLPHQVWIQNMWDPLLHEFPESVHGLRCM FT LAVKYLQEVEKTYSPDTVGYDLVRDLILVLRAKNYVEATSRYYHFNSRIEGTSTSELRQ FT PICIPCSCPHCPRHKGKGLDKQADEQKT" FT gene 286..1056 FT /gene="AV1" FT CDS 286..1056 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q7T4A3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q7T4A3" FT /protein_id="AAP47115.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAVVPIARVTKGKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFFLVRDRRPTGTPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(316..834) FT /gene="AC4" FT CDS complement(316..834) FT /codon_start=1 FT /gene="AC4" FT /product="unknown" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:Q7T499" FT /protein_id="AAP47119.1" FT /translation="MPFAQHLISITMHILHRCSARFIVEHIKNLPKILWRSCRTTVSNQ FT KKYDAISMIFSLDIFVHPYFSQHVNRFHTKSLPNAMCESGSSCNIADAHHLPNMRNIVP FT RFEGLNLTRAFTAPGHVRTSVHPVHSRFSVHRPVCPGLSLCDAGNGDNCTGYIWAVEVQ FT TSTYLRCGS" FT gene complement(1053..1463) FT /gene="AC3" FT CDS complement(1053..1463) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:Q7T4A0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q7T4A0" FT /protein_id="AAP47118.1" FT /translation="MITDSRTGEYITADRAESGVFIWEIPNPLYFKILKHDSRPFMTEH FT DIIVVQILFNHNLRKALGLHKCALTFQIWTGLRPPIGIFLRVFKTQVLKYLDMLGVLSI FT YNVIRSVYHVLDNVLERTIDVRSSYDVKVNIY" FT gene complement(1198..1602) FT /gene="AC2" FT CDS complement(1198..1602) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator" FT /db_xref="GOA:Q7T4A1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q7T4A1" FT /protein_id="AAP47117.1" FT /translation="MQSSSNSKNHSIPVAQTTLPQKKKRNIRRKRIDLRCGCSYYMSIN FT CHDHGFTHRGVHHCGSSREWRLYLGNSKSPVFQNIETRQPTLHDRTRHNSGTDTVQPQP FT EESAGTSQVCSNFPNLDGLTPSDWDFLESL" FT gene complement(1505..2590) FT /gene="AC1" FT CDS complement(1505..2590) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiation protein" FT /db_xref="GOA:Q7T4A2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q7T4A2" FT /protein_id="AAP47116.1" FT /translation="MPRTNQFQVKAKNIFLTFPKCPIPKEHMLELLRNISCPSDKLFIR FT VSQEKHQDGSLHIHALIQFKGKCQFRNPRHFDVTHPNTSTQYHPNFQGAKSSSDVKSYI FT EKDGDYIDWGQFQIDGRSARGGQQTANDAAAEALNAGSKEAALSIIREKLPKDYIFQFH FT NLNSNLDRIFAPPLEVFVCPFLSSSFDQVPEELEVWVSENVRDAAARPWRPKSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPRVYNNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNSALKQWAIKNAVFIQLEEPL FT YSGRSNNAPTEEEEEHQTQTD" XX SQ Sequence 2742 BP; 729 A; 572 C; 620 G; 821 T; 0 other; taatattacc ggaaggccgc gcgatttttt ttgtgggccc ttgaccaatg aaattcaagc 60 tacatggctt atttattacc tggggaccat taaatagact tcctcaccaa gtttggattc 120 aaaacatgtg ggatccatta ttgcacgaat ttcctgaaag cgttcatggt ctacggtgca 180 tgctagcggt gaaatatctt caggaagtgg aaaagacata ttccccggac acagtcggct 240 acgatcttgt ccgtgatctg attttagttc tccgcgcgaa gaactatgtc gaagcgacca 300 gccgatatta tcatttcaac tcccgcatcg aaggtacgtc gacgtctgaa cttcgacagc 360 ccatatgtat cccgtgcagt tgtccccatt gcccgcgtca caaagggaaa ggcctggaca 420 aacaggccga tgaacagaaa acctagaatg tacaggatgt acagaagtcc tgacgtgccc 480 aggggctgtg aaggcccttg taaggttcaa tccttcgaat ctaggcacga tgtttctcat 540 attgggaagg tgatgtgcat cagcgatgtt acacgaggaa ccggactcac acatcgcgtt 600 gggaagcgat tttgtgtgaa atctgtttac gtgttgggaa aaatatggat ggacgaaaat 660 atcaagacta aaaatcatac taatagcgtc atattttttc tggttcgaga ccgtcgtcct 720 acaggaacgc cacaggattt tggggaggtt tttaatatgt tcgacaatga accgagcact 780 gcaacggtga agaatatgca tcgtgatcga tatcaagtgc tgcgcaaatg gcatgctact 840 gtgacgggag gaacatacgc atcgagggag caagcattag ttaggaagtt tgttagggtt 900 aataattatg ttgtctacaa tcaacaggag gccggcaagt atgagaatca tactgaaaat 960 gcattaatgt tgtatatggc ctgtactcac gcatcgaacc ctgtatatgc aactctgaaa 1020 atccggatct atttttatga ttcggtaaca aattaatata tattcacttt cacatcatac 1080 gagcttctta catcaattgt tctttccaat acattgtcta aaacatgata aacagatctt 1140 attacattgt aaatagagag cacccctaac atatccaggt acttaaggac ctgggtttta 1200 aagactctca agaaaatccc aatcggaggg cgtaagcccg tccagatttg gaaagttaga 1260 gcacacttgt gaagtcccag cgctttcctc aggttgtggt tgaacagtat ctgtaccact 1320 attatgtcgt gttctgtcat gaagggtcgg ctgtcgtgtt tcaatatttt gaaatacagg 1380 ggatttggaa tttcccaaat aaagacgcca ctctctgctc gatccgcagt gatgtactcc 1440 cctgtgcgtg aatccgtgat catggcagtt tattgacatg taatacgagc atccgcaccg 1500 cagatcaatc cgtttgcgtc tgatgttcct cttcttcttc tgtgggagcg ttgtttgagc 1560 gaccggaata gagtggttct tcgagttgga tgaagactgc attctttatt gcccactgtt 1620 ttagtgctga atttttttct tcgtccagat attctttata gctgctattt ggtcctttat 1680 tgcagaggaa gatagtgggt attccacctt taatcatgac tggctttccg tatttcgtgt 1740 tgctttgcca gtctctttgg gcccccatga attctttaaa atgctttagg tagtgcgggt 1800 cgacgtcatc aatgacgttg taccaagctt cattattgta cactctcggg ctcagatcca 1860 gatgaccgca tagataattg tgtgggccta aagacctggc ccacattgtc ttgcccgtac 1920 gactatcacc ctcaatgaca atactcttgg gtctccacgg ccgcgcagcg gcatccctta 1980 cattctcaga cacccagacc tcaagttcct ctggaacttg atcgaatgaa gaagacaaaa 2040 aaggacaaac aaaaacctct aaaggaggtg caaaaatcct atctaaatta gaattcaaat 2100 tatgaaattg gaaaatataa tcttttggga gtttttccct tattatacta agtgctgctt 2160 ctttagaacc tgcgtttagg gcctctgctg ctgcatcatt tgctgtctgt tgacctcctc 2220 tagcagatcg tccatcgatc tgaaactgac cccagtcaat gtaatcaccg tctttctcga 2280 tgtaggactt gacatcggag ctggacttag ctccctggaa gtttgggtgg tattgtgtgg 2340 aggtattagg gtgagtgaca tcgaaatgtc tagggtttct gaactggcat ttacctttga 2400 attggatgag cgcgtggata tgcagagacc catcttggtg tttttcttgt gatactctga 2460 taaataattt gtcagatgga catgaaatgt ttcgaaggag ttcgagcata tgctcttttg 2520 gtattgggca ttttgggaaa gtgagaaata tattttttgc cttaacttgg aattggtttg 2580 ttcgtggcat attgaatcgg gtgctctaca aagctcatag gaatggggtg ctttgggtgc 2640 ctatttatat tgagctccca aatggcaatt ttgtaattac gaaaagtatt tcaaaaccct 2700 aacgctccac tttaattcaa atccataaag cggccttccg ta 2742 //