ID AF499925; SV 1; linear; genomic RNA; STD; VRL; 4501 BP. XX AC AF499925; XX DT 26-MAR-2003 (Rel. 75, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Mal de Rio Cuarto virus segment S1, complete sequence. XX KW . XX OS Mal de Rio Cuarto virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-4501 RX DOI; 10.1016/S0168-1702(02)00325-8. RX PUBMED; 12606083. RA Distefano A.J., Conci L.R., Munoz Hidalgo M., Guzman F.A., Hopp H.E., RA del Vas M.; RT "Sequence and phylogenetic analysis of genome segments S1, S2, S3 and S6 of RT Mal de Rio Cuarto virus, a newly accepted Fijivirus species"; RL Virus Res. 92(1):113-121(2003). XX RN [2] RP 1-4501 RA Distefano A.J., Conci L.R., Munoz Hidalgo M.G., Hopp H.E., del Vas M.; RT ; RL Submitted (09-APR-2002) to the INSDC. RL Biotechnology Institute, INTA, Las Cabanas y Los Reseros s/n cc25, RL Castelar, BsAs BWWA1712, Argentina XX DR MD5; 4202e0cc3bb9df1ec4e2a17ffe6b3286. DR EuropePMC; PMC3766826; 24058362. XX FH Key Location/Qualifiers FH FT source 1..4501 FT /organism="Mal de Rio Cuarto virus" FT /segment="S1" FT /host="Zea mays" FT /mol_type="genomic RNA" FT /country="Argentina" FT /db_xref="taxon:185954" FT CDS 38..4432 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="ORF S1" FT /db_xref="GOA:Q809F1" FT /db_xref="UniProtKB/TrEMBL:Q809F1" FT /protein_id="AAO73182.1" FT /translation="MVEQSFSRSAETCLKKFKQIQKHKTEQKLKNLIEEIKTTNGKTSQ FT HKRPFGKVTAKEKFLDIEKLKFQVLQNQAQSESEYASKLLLKDSAMDGIIANAEEIRNT FT LIGEIPLTREIIESKLKDIALVLNNASDLILKLFENDGGIEKSCIIPISVIEKDIFGVL FT HPIEIFDYNAFGIDEVNNLAINPKIRYLPNWNVQKIRDTIDKLKDDSSYVKAKSLSKDY FT GIVSNSLKRQLLIGVDRMFNKLSIQHRFGTFESQMFSCFLMKQILTEEQSYVNLPECVS FT KKSFQKRGVDTVCWQYLRQILLHYGTFPFYHHTHSSKFGVLDSTRISIQTDKPVSCILP FT SVLHGLLSGIVSELLCDLNSETALIYAKHLMNCSNQSTYQRQLDFKDSFRSWTKLCYDK FT IGYVLAVSYSEDMKPLDQRIERIESEFWADDIEKSNLEKSVDNLPNYMKPFVKSSISNC FT VHLGKAVGSKMSSNHSTSLCRDLIDEEIISVRLLASKNTDYLRWLTMTSTIVSNFGIYN FT KTSLLLEYEKSVGTREDMMVQRPDCKVSIVTEQGLSIPLINDWTKVPILNEMSELFDYN FT WKSDLIKEFESIDDFEKRFVTFLTNKSGGQKSDEPTLSKELKGISNARVIAFALNRNDY FT HDESKFLKMLMTYGKCAIRFQIDRRARVIVIVPNAIQSSELFLLLGFNSLKKDKKHNSK FT IAVGKQIGNLLDARLQMSTTGDVSSIKNSGDMKGMDAHTIPNLTLFLRNKMIEVLYELD FT PSKKCTRYFFSEDKDYILKEKHDKFEEMYTRKLRGVVIHAAKCLYYMFSMNMFLDDHFF FT ADSLTVSDQTFQSGFFATSAQHTLFLNLFLLNLERKFFASQDNKMISVMHSVMGDDVLE FT VIKNGVKFPDIVRKWLLLRKQDLTKLNYEEELSLSRIFGVFLQQAAILGVYVPYPTRMS FT LFCDERSDTTKRHVLDMMKIVMDVISAKSQRSYGIDNGLGIGYAIWACHRSSRYIYSDS FT DKRNIEALLNLDKSLDFTFICSHDEKEQSIRFIYPFVSIMCSPISWPMLTFAMTDKDDP FT NKIITYKSKAFTSLNGDGAYMLINQMFFTSNEQHMFQFVDCIKHQSKIVELKLNPNFLD FT WDERHSWGFTLGEHLLRFKRLRHLTESRKNQLGLGDIEVMVHNLNKYLDGNRVLMSFNS FT IAVLRSRKIEVSFGLMYVNHNRSKIDQSLTVRTESLEERLSLDSIFLKHVLYYKKVPSD FT IEVLKTHALCSVRLRIYGDFDYAVEHDGLIQPSEDSKFNVILPFLPGYHLNSSYGKLFL FT YSSLPTVHDRDISGTLGEITGSLGAAFDVDSAVEFGAHVYNINPSLVDAAGAAIGIPQS FT LLKNYKNLVDAFITNNFNLKYHSIFQNVKYFGLNGSLKLFSSFGDYSSRLVRFDVINKL FT SKFHNVFVRDFIFAYIHELNGRRVYLDYSLHSLLLVMSRGSIKYFTSHLNQLFNPMLSL FT ELD" XX SQ Sequence 4501 BP; 1509 A; 642 C; 816 G; 1534 T; 0 other; aagttttttt caccgacctg catgacccta catacacatg gtggaacaaa gtttcagtag 60 atctgcagag acctgtctaa aaaagtttaa acaaattcaa aaacacaaaa cagaacaaaa 120 acttaaaaac ttaattgaag aaatcaaaac aacaaatgga aaaacatctc aacataaacg 180 cccgttcggc aaagtcacag cgaaagaaaa atttcttgat attgaaaagt taaagtttca 240 agtattgcag aatcaagctc aaagtgaaag cgaatacgcc tccaaattac tattgaaaga 300 tagtgctatg gatgggataa ttgcgaatgc cgaagagatt agaaatacat taattggaga 360 aattccgtta accagagaaa taattgaatc aaaattaaaa gacattgctt tagttctcaa 420 taatgctagc gatttaattt taaaactatt cgaaaacgac ggtggtattg aaaaatcttg 480 catcattcca atttcagtaa ttgaaaaaga catttttggc gtactacatc cgattgaaat 540 ctttgattat aatgcttttg gtatcgatga agttaacaat ttagctataa atcctaaaat 600 ccgttacctg ccaaattgga atgttcagaa aattagagat accatagata agttaaaaga 660 tgatagttca tatgttaaag ctaaatcatt gtcaaaagat tatggtatag ttagtaattc 720 attgaaaaga caattgttaa ttggcgttga tagaatgttt aataagttaa gtattcagca 780 taggtttgga acttttgaaa gtcaaatgtt tagttgtttt cttatgaagc aaattcttac 840 tgaggaacag tcatatgtta atttaccaga atgtgtctcg aagaaaagtt ttcagaagcg 900 tggtgttgat actgtttgtt ggcaatattt acgtcaaatt ctacttcatt atggtacctt 960 tccattttat catcatacac atagttcaaa atttggagtg ttagatagta ctcgtatttc 1020 aatccagact gataaacctg tttcttgtat tttacccagt gtgttgcacg gcttattaag 1080 tggtattgtt tcagaattat tgtgtgatct caactccgaa acagctctaa tatatgcaaa 1140 acatttaatg aattgttcaa atcaatcaac ttatcaacga caacttgatt tcaaagatag 1200 ttttcggtcc tggacaaaat tatgctatga caaaatcggt tatgtgttag ctgtatctta 1260 ttctgaagac atgaaacctt tagatcaaag aattgaacgc attgaatctg agttttgggc 1320 tgatgatatt gaaaaatcaa atttggaaaa atcagttgac aatttaccta attacatgaa 1380 accatttgtt aagagctcga tttctaattg tgtacatctt ggtaaagctg taggtagtaa 1440 aatgtcatca aatcattcaa catcgctttg tcgtgattta atagatgaag aaattatttc 1500 agttcgtctt ttagctagta aaaatacaga ctatcttcgt tggttaacaa tgacaagtac 1560 tattgtttca aatttcggga tttacaacaa aacatcactt ttattggagt atgaaaagtc 1620 agttggcaca cgagaagata tgatggttca acgaccagat tgtaaagtta gtatagtgac 1680 ggagcaaggt ctttcaatcc ctttgattaa tgactggaca aaagtgccaa ttctgaacga 1740 aatgtctgag ctatttgatt acaattggaa atcggacttg attaaagagt ttgaaagcat 1800 agatgatttt gagaaaagat ttgtaacatt tttaactaat aaatctggtg gacagaaaag 1860 tgatgaacca acattatcaa aggaattaaa aggtatttca aacgctcgcg ttatagcttt 1920 cgctcttaat aggaatgatt accatgatga atcaaaattt ctcaaaatgc taatgactta 1980 tggtaaatgt gcaatcagat ttcaaattga tcgtcgtgcg agagtaattg taattgttcc 2040 aaatgcaata cagtcaagtg aattgttctt attgttaggt tttaattcat taaagaaaga 2100 taaaaaacat aattcaaaga ttgctgttgg taaacaaatt ggtaatttgc tagatgctag 2160 attgcaaatg agcacgaccg gagatgtatc ctcaattaag aattcaggtg atatgaaagg 2220 tatggatgcc catactattc caaatttgac attgttttta agaaataaaa tgattgaagt 2280 attatatgag ttggatccaa gtaaaaaatg tactcgttac ttcttcagtg aggataaaga 2340 ttatattttg aaggaaaagc acgataaatt tgaagaaatg tatacccgta agttgagagg 2400 agtagttatc cacgccgcta aatgtttgta ttacatgttt tcaatgaata tgtttttaga 2460 tgatcatttc tttgctgata gtttaactgt ttcagatcaa acgtttcaat ctggattttt 2520 tgcaacttcg gctcaacata cgttgttttt aaatttattt ttgcttaatt tagaaagaaa 2580 attctttgct tctcaagata ataaaatgat ttcggtaatg cattcagtta tgggtgatga 2640 tgttttggaa gtgatcaaaa atggagttaa gtttcctgac atagttagaa aatggttatt 2700 gttacgtaaa caagatttaa ctaaattaaa ttacgaagag gagttatcct tatctcgcat 2760 atttggagta tttttgcaac aagctgcaat attaggtgtt tatgttccat atccaacaag 2820 gatgtcctta ttttgtgatg aaagatcaga tactacgaaa agacatgttc ttgatatgat 2880 gaagatagtt atggatgtaa tatcagcaaa gtctcaacgt tcttatggta ttgataatgg 2940 tttaggtatt ggatacgcga tttgggcctg tcatcgaagt tctcgttata tttactctga 3000 ctcagataag cgtaacattg aagctttgct taatcttgat aaatctcttg atttcacttt 3060 catttgctca catgatgaaa aagaacaatc aatacgtttt atatatcctt ttgtttctat 3120 tatgtgctct cctatatctt ggccaatgtt aaccttcgca atgactgaca aagacgatcc 3180 taacaaaata attacttata aatcaaaagc ttttacttcc ttgaatggcg atggagcgta 3240 tatgttgata aatcaaatgt tttttactag taatgaacaa catatgtttc aatttgttga 3300 ttgcataaag catcaatcta aaatcgtaga gttaaagtta aatccaaatt tccttgattg 3360 ggatgaacgt catagttggg gtttcacatt aggcgagcat ttacttaggt ttaaaagatt 3420 aaggcatctt actgaaagtc gtaaaaatca gcttggattg ggtgacattg aagttatggt 3480 tcataatctc aataaatatt tggatggaaa tcgtgtattg atgagtttta atagtattgc 3540 tgtgctacgt tcccgcaaaa ttgaagtttc atttggactc atgtatgtca atcataatcg 3600 atcgaaaatt gatcaatcct tgacagtaag aactgaatca ttggaagagc gattatcttt 3660 ggattcaata ttcttgaaac atgtattata ttacaaaaag gttcccagtg atattgaagt 3720 tctgaagacg cacgcgcttt gttcagttag attgagaata tatggtgact ttgattacgc 3780 agttgagcac gacggattaa ttcaacctag tgaagattcg aaatttaatg taattttacc 3840 atttttaccc ggatatcatt taaatagttc ttacggaaag cttttcttat attctagttt 3900 accaacggtg catgacagag acatctcagg aactttagga gagattacag gatcattagg 3960 agcagctttt gatgttgatt cagcagtaga gtttggagca catgtatata atataaatcc 4020 tagtttagtt gatgctgctg gtgccgctat tggtatacct caaagtttac ttaaaaatta 4080 taaaaattta gttgatgctt tcattacgaa caattttaat ctaaaatatc attcaatttt 4140 tcagaatgtt aaatactttg gtttaaatgg cagtttgaaa ctattctcat catttggcga 4200 ttattccagt agactagtac ggtttgacgt gattaacaaa ttgtcaaagt ttcataatgt 4260 atttgttcga gatttcatat tcgcatacat tcatgaattg aacgggcgtc gagtttatct 4320 tgattacagt ttacacagct tgcttctagt tatgtctcgt ggttctatta aatattttac 4380 ttcccatcta aatcaactct ttaatcccat gctatctctg gagctcgact gaagaggcgt 4440 ttccgattgt tgtttgtagt ggacggcgtt tgagtgtcat tggtggaaat cagctattgt 4500 c 4501 //