ID AF485264; SV 1; linear; genomic RNA; STD; VRL; 3316 BP. XX AC AF485264; XX DT 18-SEP-2002 (Rel. 73, Created) DT 20-JUN-2003 (Rel. 76, Last updated, Version 3) XX DE Whitewater Arroyo virus strain 9310141 segment S, complete sequence. XX KW . XX OS Mammarenavirus whitewaterense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-3316 RX DOI; 10.1006/viro.2002.1695. RX PUBMED; 12504568. RA Archer A.M., Rico-Hesse R.; RT "High genetic divergence and recombination in Arenaviruses from the RT Americas"; RL Virology 304(2):274-281(2002). XX RN [2] RP 1-3316 RA Archer A.M., Rico-Hesse R.; RT ; RL Submitted (20-FEB-2002) to the INSDC. RL Virology and Immunology, Southwest Foundation for Biomedical Research, 7620 RL NW Loop 410 @ Military Dr, San Antonio, TX 78227, USA XX DR MD5; 28f5f1e8abaf8d28bfa3e73e37debb9c. DR EuropePMC; PMC2277458; 18421377. DR EuropePMC; PMC3047505; 12504568. XX FH Key Location/Qualifiers FH FT source 1..3316 FT /organism="Mammarenavirus whitewaterense" FT /segment="S (small)" FT /strain="9310141" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052331" FT gene 63..1505 FT /gene="GPC" FT CDS 63..1505 FT /codon_start=1 FT /gene="GPC" FT /product="glycoprotein precursor" FT /db_xref="GOA:Q8B118" FT /db_xref="InterPro:IPR001535" FT /db_xref="UniProtKB/TrEMBL:Q8B118" FT /protein_id="AAN09950.1" FT /translation="MGQLISFFGEIPSIIHEALNIALIAVSIISILKGVINIWGSGLLQ FT FIVFLLLAGRSCSYKIGHHVELQHIILNASYITPYVPMPCMINDTHFLLRGPFEASWAI FT KLEITDVTTLVVDTDNVANPTNISKCFANNQDERLLGFTMEWFLSGLEHDHHFTPQIIC FT GNVSKGEVNAQVNITMEDHCSQVFLKMRRIFGVFKNPCTSHGKQNVLISVSNWTNQCSG FT NHLSSMHLIVQNAYKQMIKSRTLKSFFAWSLSDATGTDMPGGYCLEKWMLISSELKCFG FT NTAIAKCNLDHSSEFCDMLKLFEFNRNAIKTLQNDSKHQLDMIITAVNSLISDNTLMKN FT RLKELINIPYCNYTKFWYVNHTGFNVHSLPRCWLTKNGSYLNVSDFRNQWLLESDHLIS FT EILSREYEARQGKTPLGLVDVCFWSTLFYVSSIFLHLLRIPTHRHIIGEGCPKPHRLSS FT DSVCACGLFKQKGRPLRWARKV" FT gene complement(1577..3265) FT /gene="NP" FT CDS complement(1577..3265) FT /codon_start=1 FT /gene="NP" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q8BDE2" FT /db_xref="InterPro:IPR000229" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR035083" FT /db_xref="InterPro:IPR035084" FT /db_xref="InterPro:IPR038115" FT /db_xref="UniProtKB/TrEMBL:Q8BDE2" FT /protein_id="AAN09951.1" FT /translation="MSDQSVPSFRWTQSLRRGLSAWTTSVKADVLNDTRALLSGLDFAK FT VASVQRMMRRVKRDDSDLVGLRDLNKEVDSLMIMKSNQKNMFLKVGSLSKDELMELSSD FT LEKLKQKVQRTERVGNGTGQYQGNLSNTQLTRRSEILQLVGIQRAGLAPTGGVVKIWDI FT KDPSLLVNQFGSVPAVTISCMTEQGGESLNDVVQGLTDLGLLYTAKYPNLNDLKALTTK FT HPSLNIITQEESQINISGYNLSLSAAVKAGACLIDGGNMLETIKIEESTFTTVIKTLLE FT VKNKEKMFVSPTPGQRNPYENVLYKLCLSGEGWPYIASRSQIKGRAWDNTVVEFDTATV FT KEPIPIRNGGAPLLTTLKPEIENQVKRSVESLLINDTTWIDIEGPPNDPVEFAIYQPES FT QRYIHCYRRPNDIKSFKDQSKYCHGILLKDVENARPGLISSIIRSLPKSMVFTAQGADD FT IRKLFDMHGRQDLKIVDVKLSAEESRIFEDLVWKRFEHLCDKHKGIVIKSKKKGSTPAT FT TNAHCALLDCIMFSAVISGSVSNEKPKRMLPIDLLFREPETTVVL" XX SQ Sequence 3316 BP; 892 A; 722 C; 693 G; 1009 T; 0 other; cgcacagtgg atcctaggcg ttttgacttg cgcaattaat tgacttcatt cattgcccca 60 caatggggca gctgatctcg tttttcgggg aaattccatc aataatacac gaggccctga 120 acattgcatt aatagcagtc agcatcatat caattctgaa gggtgttatc aacatttggg 180 ggagtggcct actgcagttc attgtgtttc tgctgttggc tgggcgatcc tgctcataca 240 agattggcca tcatgttgaa cttcaacaca taattctgaa tgcatcctac atcacaccct 300 atgtaccaat gccctgcatg atcaatgaca cacatttctt actgaggggt ccttttgagg 360 ccagttgggc catcaagttg gagattactg atgtgacaac tcttgtggtg gacactgaca 420 acgttgctaa tcccacaaac attagcaagt gttttgcaaa caaccaggat gagaggttgt 480 taggcttcac catggagtgg tttttgagtg gattggaaca tgatcaccat ttcactccac 540 agatcatttg tggaaatgta tccaaaggag aggttaatgc tcaagtgaac ataactatgg 600 aggatcattg cagtcaggtg tttttgaaaa tgagaaggat ttttggggtt ttcaaaaacc 660 cttgcacttc acatgggaag cagaatgtgc taatctccgt cagtaattgg accaatcaat 720 gctcagggaa ccacttaagt tccatgcacc ttatagtgca aaatgcatat aaacaaatga 780 tcaaatcaag aactttgaaa agtttttttg cctggtcact gtctgatgcc acagggactg 840 acatgccagg agggtactgt ttggagaaat ggatgctgat ttcaagtgag ctaaaatgtt 900 ttggaaacac tgcaatagct aagtgcaact tggatcacag ttcagagttt tgtgacatgc 960 tcaaattgtt tgagtttaac agaaatgcaa tcaaaacact tcagaatgac agcaagcatc 1020 aactagacat gatcataact gctgtcaact ctctgatttc agacaatact ctaatgaaaa 1080 acagacttaa agaactcatc aacattcctt attgtaatta tactaagttc tggtatgtga 1140 accacactgg atttaatgtc cattcactgc caagatgttg gctcacaaaa aatggcagtt 1200 acttgaatgt gtctgacttt aggaatcaat ggcttttaga aagtgaccat ttgatctctg 1260 aaatcttaag tagagaatat gaggcaagac aaggcaagac accacttggg ttggtggatg 1320 tatgcttctg gagcaccttg ttttatgttt catcgatatt tttacaccta ctgagaatac 1380 ccacccacag acacataatt ggtgaaggct gtcccaaacc acatagactt tccagtgact 1440 cagtatgtgc atgtggtctt tttaaacaaa aagggaggcc cttaaggtgg gccaggaaag 1500 tgtagaatgt caaccgaggt ggcctccacc gctgcacccc cttcgggggg tgcagcggtg 1560 gaggcccttt gcagcctcaa aggacgactg ttgtttcagg ctccctgaag agcaggtcaa 1620 tgggaagcat tctctttggt ttctcattgg aaactgaacc tgatataaca gcactgaaca 1680 ttatgcagtc aagaagtgca cagtgtgcat tggttgttgc aggtgtcgac cccttctttt 1740 tactcttgat gactatcccc ttatgtttgt cacaaaggtg ctcaaatctt ttccaaacaa 1800 ggtcttcaaa aatccgtgac tcttctgcac tcaatttgac atcaacaatc ttcagatctt 1860 gcctgccatg catatcaaaa agtttcctta tatcgtctgc accttgtgca gtgaagacca 1920 ttgatttagg taaactccta attattgatg aaataagacc tggtcgcgca ttctcaacat 1980 ctttcaataa tattccatgg caatatttac tctgatcttt gaaggatttt atgtcattgg 2040 gtctcctgta acagtgtata tatctctgtg attccggctg gtagatggca aactcaacgg 2100 ggtcatttgg tggcccctca atgtcaatcc atgttgtatc attgataagc agagactcca 2160 cactcctctt cacttgattc tcaatctcag gtttaagtgt tgtcaacaag ggggcacccc 2220 catttcttat aggtatgggc tccttaactg tggcagtgtc aaactcaaca actgtgttat 2280 cccatgctct accttttatc tgtgatcgtg aggcaatgta aggccagcct tcaccagata 2340 gacatagttt gtagagcaca ttctcgtaag gatttctctg cccaggggtg ggactaacaa 2400 acattttttc cttgtttttg acttccaaaa gtgttttgat gactgttgtg aatgtagatt 2460 cctcaatctt tattgtttca agcatgttgc caccatcaat aagacaagca ccagctttca 2520 cagcagctga taaactgaga ttgtatccag aaatattgat ctgtgactcc tcctgagtga 2580 ttatattcaa ggatggatgt tttgttgtta gagccttgag atcattgaga tttggatatt 2640 ttgctgtgta cagaagccca aggtcagtaa gaccctggac cacatcattg agggactctc 2700 ccccttgctc agtcatacag gagattgtca cagctggcac agatccaaac tgattgacca 2760 agagtgatgg gtcttttata tcccatatct ttactacacc tccggttggt gccaagcctg 2820 ctctttgtat accgacaagt tgtaggattt cagatctcct tgttagctgt gtgtttgaaa 2880 ggtttccttg gtactgtcct gtgccgttgc ccaccctttc agttctctgt accttttgtt 2940 ttagcttttc caagtcactg gagagttcca tcagttcatc cttggataaa gaacccactt 3000 tcaggaacat gtttttttgg tttgacttca taatcatcag tgagtccact tctttgttta 3060 gatctctcaa accaacaaga tcactatcat cccttttgac cctcctcatc atcctttgaa 3120 cacttgcgac ctttgcaaag tccaggccag acaaaagtgc tcttgtatca ttgagaacgt 3180 ctgccttgac actagtcgtc caggcagaga gccctctcct aagagattga gtccagcgga 3240 aggatggcac tgattggtca ctcattcttg attatctttt gcgctgatat cctataagcc 3300 taggatccac tgtgcg 3316 //