ID AF485263; SV 1; linear; genomic RNA; STD; VRL; 3533 BP. XX AC AF485263; XX DT 18-SEP-2002 (Rel. 73, Created) DT 20-JUN-2003 (Rel. 76, Last updated, Version 3) XX DE Tamiami virus strain CDC W-10777 segment S, complete sequence. XX KW . XX OS Mammarenavirus tamiamiense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-3533 RX DOI; 10.1006/viro.2002.1695. RX PUBMED; 12504568. RA Archer A.M., Rico-Hesse R.; RT "High genetic divergence and recombination in Arenaviruses from the RT Americas"; RL Virology 304(2):274-281(2002). XX RN [2] RP 1-3533 RA Archer A.M., Rico-Hesse R.; RT ; RL Submitted (20-FEB-2002) to the INSDC. RL Virology and Immunology, Southwest Foundation for Biomedical Research, 7620 RL NW Loop 410 @ Military Dr, San Antonio, TX 78227, USA XX DR MD5; d4bd48e0054ff5a429d1e29b95bd13ad. DR EuropePMC; PMC2277458; 18421377. DR EuropePMC; PMC3047505; 12504568. DR EuropePMC; PMC5932378; 29720525. XX FH Key Location/Qualifiers FH FT source 1..3533 FT /organism="Mammarenavirus tamiamiense" FT /segment="S (small)" FT /strain="CDC W-10777" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052329" FT gene 81..1538 FT /gene="GPC" FT CDS 81..1538 FT /codon_start=1 FT /gene="GPC" FT /product="glycoprotein precursor" FT /db_xref="GOA:Q8AYY5" FT /db_xref="InterPro:IPR001535" FT /db_xref="UniProtKB/Swiss-Prot:Q8AYY5" FT /func_characterised="identical sequence" FT /protein_id="AAN09948.1" FT /translation="MGQLISFFGEIPTILQEALNIALIAVSIIATIKGVVNVWKSGLIQ FT LLMFVMLAGRSCSVQIGHHLELEHIILNSSSILPFTPTLCKLNKTYFLVRGPFQAHWGV FT DLAIGSTTVAVENATKTYTLKSKNFTGCFEGNPDPDSAALLVTWLFNSLHHDYKNDPSI FT LCERVSGENSFRFQINISEPEYCEKILSRMANLFGSFENYCLNNRHIKKLIIIRNLTWS FT QQCHENHMSAMQLITSNIHTQVVRARRILSFFTWSLSDAVGNDMPGGYCLEKWMLIASQ FT LKCFGNTAVAKCNLNHDSEFCDMLRLFDFNRKAIETLQNKTRSQLNIAINAINSLISDN FT LLMKNRVKELMDIPFCNYTKFWYVNHTKLNHHSLPRCWLVKNGSYLNESEFRNDWLLES FT DHLISEILSREYEERQGRTPLSLVDVCFWSTLFYTASIFLHLIRIPTHRHIVGEGCPKP FT HRLRADSTCACGLYKQKRRPLKWVRSN" FT gene complement(1720..3418) FT /gene="NP" FT CDS complement(1721..3418) FT /codon_start=1 FT /gene="NP" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q8BDE3" FT /db_xref="InterPro:IPR000229" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR035083" FT /db_xref="InterPro:IPR035084" FT /db_xref="InterPro:IPR038115" FT /db_xref="UniProtKB/TrEMBL:Q8BDE3" FT /protein_id="AAN09949.1" FT /translation="MSDQSVPSFRWVQSLRRGLSAWTTPVKADVLNDTRALLSGLDFSK FT VASVQRMMRREKRDDNDLTNLRDLNKEVDSLMTMRSSQKNMFLKVGSLSKDELMELSSD FT LNKLKEKVQRSERISGSSGVYQGNLTTTQLTRRSEILQLVGIQRPGLNRRGGVVKIWDI FT KEPEHSLINQFGSTPAVTISCMAEQGGETLNDVVARPNRSVGYFTQQSFLIWVTWRALS FT SKHSCLKVITQEESQINISGFNLSLSAAVKAGACLVDGGNMLETIKVEESTFTTIIKTL FT LEIKSKERMFVDITPGQRNPYENLLYKLCLSGEGWPYIASRSQIKGRAWDNTVIEFDVS FT PRKPPVPIRNGGSPVLTTLKPEVEEQIKRSIESLSVHDTTWIDIEGPPFDPVEMAIYQP FT DSLKYIHCYRKPNDVKSFKDQSKYCHGILLKDIEYCSSLALYQPSLRHLPKSMVFTAQG FT SEDIRRLFDMHGRQDLKIVDVKFTAEQSRVFEELTWKRFEHLCDKHKGIVIKSKKKGTT FT PASTNAHCALMDCIMFSGVLLGAIPNDKPRRLLPLDILFREPDTTVVL" XX SQ Sequence 3533 BP; 950 A; 812 C; 750 G; 1021 T; 0 other; cgcacagtgg atcctaggcg tttcttgagc ttgcgcaaat agtgattcag ttaattttca 60 gacatactca gaacccgatc atggggcaac tgatctcctt ctttggagag attccaacca 120 ttctgcaaga ggctctcaac attgcactca ttgcagtcag catcattgca accatcaagg 180 gtgtcgtgaa tgtctggaaa agtggtctca tccagctgct catgtttgtt atgttggctg 240 ggaggtcatg ctcagtgcag atagggcatc accttgaact tgagcatata atactgaata 300 gttcttcaat cctaccattc accccaaccc tttgcaaact aaacaagact tacttccttg 360 tgaggggacc cttccaggct cactgggggg tcgatcttgc aataggcagc acaacggttg 420 cagttgaaaa tgcaacgaaa acctacaccc tgaagtctaa aaactttaca ggctgtttcg 480 agggcaaccc cgatccagat tcagcagcac tactggttac ttggttgttc aacagtctgc 540 accatgatta caaaaatgac ccatcaattc tgtgtgagcg tgtgagtggg gagaattctt 600 ttcgattcca gatcaacata agtgaaccag agtactgtga gaaaattctc tctaggatgg 660 ccaacctatt tggcagcttt gaaaactact gcttaaacaa tagacacatt aaaaaactga 720 taatcatcag aaaccttaca tggagtcagc agtgtcacga gaatcacatg agtgccatgc 780 agcttataac ctccaatatc cacacccagg ttgtgagagc caggaggatt ctcagtttct 840 tcacctggtc gttgtcagat gctgtgggaa acgacatgcc aggagggtat tgtttagaaa 900 aatggatgct gattgccagc caactaaaat gttttggcaa tactgctgtt gcaaagtgta 960 acttgaacca tgattctgag ttttgtgaca tgctcagact ttttgacttc aacagaaaag 1020 cgattgagac tctgcagaac aaaacaagga gccagctaaa tatagctatt aatgccatca 1080 actccttaat atctgacaac ctgttgatga agaatagagt taaggaattg atggatatac 1140 ccttttgtaa ttacaccaaa ttttggtatg tgaatcacac aaaattgaac caccattcac 1200 ttcccagatg ttggttagtg aaaaatggga gttacctcaa tgaatcagag tttagaaatg 1260 attggcttct tgagagtgat cacctcatct ctgagatcct gagcagagag tatgaggaga 1320 ggcaggggcg gacaccccta tcattggtcg acgtctgctt ttggagcact ttgttttata 1380 ctgcatctat ctttctccat ttgatcagaa ttccaacaca cagacacata gttggtgaag 1440 gctgtccaaa gccccacaga cttagggcag attccacctg tgcatgtggg ttatacaaac 1500 aaaaaagaag gcctcttaag tgggttaggt ccaactaact ctgtgacttg tggtcacctt 1560 cactgccacg cccctgtggg gcgtggcagt aaggcctccg accggttcat gtgaacgcag 1620 tccatgatca acaaaccaca tatgtgaaat tgctgtccta tggcccccgt tgctgcaccc 1680 catctggggt gcagcaacga gggcccagtt aggtccagat ctagagaaca actgttgtgt 1740 caggttctct gaataagatg tctagtggta gaagccttct gggtttatca ttagggattg 1800 ctcccaacaa aacaccacta aacataatgc aatccattaa cgcgcagtga gcattggtac 1860 ttgctggtgt ggtccctttc ttcttgctct taatgactat tcctttatgt ttgtcacata 1920 gatgttcaaa cctcttccaa gtgagttctt caaagactct tgattgctca gctgtgaact 1980 taacatcaac aatctttaaa tcttgtctac catgcatatc aaagagcctc cttatatcct 2040 cacttccctg agctgtgaaa accatggact taggaagatg tcttaatgat ggctgatata 2100 atgccaggga cgagcaatac tcaatatcct ttagcaggat tccatggcaa tatttgcttt 2160 gatctttaaa agatttgaca tcattaggtt tccggtagca gtggatgtat tttagtgagt 2220 cgggctggta aattgccatt tcaacagggt caaatggtgg tccctcaatg tcaatccatg 2280 tagtgtcatg aactgagagg gactcaattg accttttgat ctgctcctct acttcaggct 2340 tcaatgttgt cagcacaggt gagccaccat tcctgatagg aaccggcggc tttcttggtg 2400 agacatcaaa ctcaatgaca gtgttgtccc aagctcgacc cttgatctgt gatcgtgacg 2460 ctatatatgg ccacccctct ccagacaaac aaagcttgta cagaaggttt tcatatggat 2520 ttctctgacc tggcgtgata tcaacaaaca tcctttcctt tgattttatc tccaatagtg 2580 ttttgatgat tgttgtgaag gttgattctt caacttttat tgtctcaagc atgttcccgc 2640 catcaaccaa acatgcgcct gccttcacag cagcagagag actcaggtta aagccagaaa 2700 tgtttatttg tgactcttct tgggtgatca ctttgagaca ggagtgctta ctggacaggg 2760 ctctccaagt cacccagatt aggaaacttt gctgtgtaaa gtagcccaca gatctgttag 2820 gccttgcaac aacatcattc aaagtctctc ctccctgttc tgccatgcag gagatggtca 2880 ctgcaggggt tgatccaaat tggttgatga gagagtgctc gggttctttg atgtcccaaa 2940 ttttaacaac acctcccctt ctattcagtc caggcctttg gatgccaact agctgaagaa 3000 tctctgatct tctagtaagt tgtgttgtgg tgagattgcc ttgatacaca ccactgctcc 3060 cacttattct ctctgatctc tgaaccttct cctttaattt attgagatca ctggagagtt 3120 ccattagttc atcttttgac agagacccaa cctttaagaa catatttttc tgtgatgacc 3180 tcattgtcat taaagaatcc acttccttgt tcaagtccct aaggtttgtc aggtcattgt 3240 cgtccctctt ctctcttctc atcatgcgtt gcacacttgc aacctttgag aagtcaagac 3300 cagacaaaag ggctctggta tcattgagca catctgcttt aactggggtt gtccatgcag 3360 acagccccct tctaagggat tgaacccacc ggaatgatgg cactgactga tcactcatgg 3420 tcaattgaag tagttgagaa gatcccgtgg gtaccactat ggattgccct ctaagtagta 3480 gacacaagtc actctatgcg tatatcacct aatagcctag gatccactgt gcg 3533 //