ID AF485262; SV 1; linear; genomic RNA; STD; VRL; 3393 BP. XX AC AF485262; XX DT 18-SEP-2002 (Rel. 73, Created) DT 20-JUN-2003 (Rel. 76, Last updated, Version 3) XX DE Pirital virus strain VAV-488 segment S, complete sequence. XX KW . XX OS Mammarenavirus piritalense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-3393 RX DOI; 10.1006/viro.2002.1695. RX PUBMED; 12504568. RA Archer A.M., Rico-Hesse R.; RT "High genetic divergence and recombination in Arenaviruses from the RT Americas"; RL Virology 304(2):274-281(2002). XX RN [2] RP 1-3393 RA Archer A.M., Rico-Hesse R.; RT ; RL Submitted (20-FEB-2002) to the INSDC. RL Virology and Immunology, Southwest Foundation for Biomedical Research, 7620 RL NW Loop 410 @ Military Dr, San Antonio, TX 78227, USA XX DR MD5; dd9e8456d9da0539e0f6927cb8d90bf0. DR EuropePMC; PMC3047505; 12504568. DR EuropePMC; PMC3086254; 20507759. DR EuropePMC; PMC3210867; 21982818. DR EuropePMC; PMC3309595; 22377271. DR EuropePMC; PMC4111098; 24161346. DR EuropePMC; PMC4340808; 25700047. DR EuropePMC; PMC5977225; 29724035. XX FH Key Location/Qualifiers FH FT source 1..3393 FT /organism="Mammarenavirus piritalense" FT /segment="S (small)" FT /strain="VAV-488" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052324" FT gene 47..1579 FT /gene="GPC" FT CDS 47..1579 FT /codon_start=1 FT /gene="GPC" FT /product="glycoprotein precursor" FT /db_xref="GOA:Q8B119" FT /db_xref="InterPro:IPR001535" FT /db_xref="UniProtKB/Swiss-Prot:Q8B119" FT /func_characterised="identical sequence" FT /protein_id="AAN09946.1" FT /translation="MGQFITLMQSIPEALNMAFNVALVIVSLLCVTKGLINLWKCGIIQ FT LLMFLALAGRSCDGEYKIDRRHVLSHVEFNLTRMFDNLPQSCSINNTHHYYKGPENTTW FT GVELTLTNTSVMNRSDENVTSIRSLGFGNITNCDKTGEAGHTLKWLLNELHFTVLHVTR FT HIGALCRTTAGAGLLIQYNLTTSDKGGEVGRHLIASLAQIIGDNKAAWVGKCYNNCTSS FT GKCSLTNCEGGTHYKFLVIQNTTWPNHCSYSPMSTVRMIIQKTAYSSVSRKLLGFFTWD FT ISDSSGQHVPGGYCLEQWAIVWAGIKCFDNSVMAKCNKDHNEEFCDTMRLFDFNQNAIK FT TLQLNVENSLNLMKKSINGLISDSLVIRNSLKQLAKIPYCNYTKFWYVNDTITGKHSLP FT QCWLVSNGSYLNETHFKNEWLWESQKLYNDMLLKEYEERQGNTPLALADLCFWSLVFFT FT TTVFFQLIGIPTHRHLIGEGCPKPHRLTSNSLCSCGFYKIPKKPFRWVRKGK" FT gene complement(1659..3342) FT /gene="NP" FT CDS complement(1660..3342) FT /codon_start=1 FT /gene="NP" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q8BDE4" FT /db_xref="InterPro:IPR000229" FT /db_xref="InterPro:IPR035083" FT /db_xref="InterPro:IPR035084" FT /db_xref="InterPro:IPR038115" FT /db_xref="UniProtKB/Swiss-Prot:Q8BDE4" FT /func_characterised="identical sequence" FT /protein_id="AAN09947.1" FT /translation="MASDNVASFRWTQALRRGLSNWTNPVKSDVITDTRALLAALDFDR FT VAQVQRLMRKDKRTDTDLTKLRDLNKEVDALMNMRTTQKDNVLRVGGLSKDELMELASD FT LQKLKKKVLRVEGSGQPGVYAGNLTTTQLEQRSKILRDMGFAQLRGNPSGVVKVWDIKD FT SSLLINQFGSMPAVTMACMTEQGGESLNDVVQGLSALGLLYTVKYPNMSDLEKLADQYP FT CLGYITQEQSQINVSGYNLSLSAAVKAGACMLDGGNMLETIQVKPTMFSSMIKAVLEVK FT SKERMFVSEAPGQRNPYENLLYKLCLSGDGWPYIGSRSQVKGRAWDNTTVDLTDTGSPN FT HPPVRNGGSPRLSQLSHAKEEQILEGLKRLDSKATTWIDIEGTPNDPVELAIFQPESGN FT YIHCYREPHDVKSFKDQSKYSHGMLLKDLTNTQPGLISFIIKNLPAGIVLTAQGSDDIE FT KLLEMHARRDISIIDVRLTSEQARQFEDKVWDKFGILCNKHKGIVLARKKKGSPPGSKN FT PHCALLDCIMFCSTIGGFVDDKKPTRLLPLDLLYREQASLIEL" XX SQ Sequence 3393 BP; 944 A; 775 C; 703 G; 971 T; 0 other; cgcacagtgg atcctaggca tacaagtcta cgccttactc ttgatcatgg ggcaattcat 60 aactttgatg caatcgatac cagaagcatt gaacatggct ttcaatgttg ctctagtgat 120 tgtgtcactg ttatgtgtta ccaagggact gatcaacctc tggaaatgcg ggatcattca 180 actcctaatg tttcttgcat tagcaggaag atcctgtgat ggtgaataca agatcgatag 240 gagacatgtc ctgtcacatg tagagtttaa cctaactagg atgtttgaca atctgccaca 300 atcctgctct atcaacaata cacaccatta ctataaggga ccagaaaaca ccacttgggg 360 tgttgagctc acactcacca atacttcagt gatgaataga tctgatgaga atgtcacatc 420 aatcagaagt cttgggtttg ggaacataac caactgtgac aagacaggtg aggcaggcca 480 cactctgaaa tggctcctga acgagcttca cttcacagtg ctccacgtca cgaggcatat 540 aggggctctt tgcagaacaa cagcaggtgc tggcctgttg attcaataca atctgacaac 600 ctctgacaaa ggtggtgaag ttggaagaca tctaatagca tctcttgccc aaatcatcgg 660 agataataaa gcagcatggg ttgggaaatg ctacaacaac tgcaccagct ctggcaagtg 720 ctctctaaca aactgtgagg gtgggacaca ttacaagttt cttgtgattc aaaacaccac 780 atggccaaat cattgctcct attcaccaat gtctactgta aggatgataa ttcaaaaaac 840 agcatacagc tcagtttcca ggaaactctt gggattcttc acatgggaca tttcagactc 900 atcaggccaa catgtgcctg gaggatactg tttggaacag tgggcaattg tctgggcagg 960 aatcaaatgt tttgataact ctgtaatggc caaatgcaac aaagatcaca atgaggaatt 1020 ctgtgacacc atgaggctgt ttgacttcaa tcaaaatgcg attaaaacat tgcagttaaa 1080 tgttgaaaac agtctaaatc tgatgaaaaa aagcataaat ggtttgattt ctgattcact 1140 tgtcatcaga aacagtctca aacaactggc caaaattccg tactgtaact acaccaagtt 1200 ttggtatgtg aatgacacca taactgggaa acatagtctg cctcaatgtt ggcttgtctc 1260 aaatggtagc tacctaaatg aaacgcattt taaaaatgaa tggttgtggg aaagccaaaa 1320 actttataat gacatgctct tgaaagaata tgaagaaaga caagggaata cccctttagc 1380 tctagctgac ctttgcttct ggtccttggt gttcttcaca acaacagtat tctttcagtt 1440 gattggcatc cctactcaca gacacctgat tggtgaaggt tgcccaaaac ctcacagatt 1500 gacttcaaat tcattgtgtt catgtggttt ttataagata cccaagaagc catttagatg 1560 ggttaggaaa ggtaaatagg caaccagaaa caagaccagt aactggcctc gatgtcacac 1620 cccaattggg gtgtgacatc gaggctcgcg tcaaggagtt tagagctcaa tcagtgaggc 1680 ttgctctcta tagaggaggt ccagcggtaa aagtctggtg ggtttcttgt catcaacgaa 1740 cccaccaatt gtggagcaaa acatgatgca gtccagaaga gcacagtgtg ggtttttact 1800 accaggagga gagcctttct tctttcttgc aagaacaatc cccttatgct tgttgcacag 1860 aatgccaaac ttgtcccaga ctttgtcctc gaactgcctt gcttgttctg aggttaatct 1920 cacatctatg attgatatgt ctctccttgc atgcatctcc aatagtttct caatgtcatc 1980 actcccctgt gcagtgagaa caattcctgc aggaagattc ttgatgataa aggatatcaa 2040 cccaggttgt gtgtttgtaa gatccttcaa gagcattcca tgtgagtatt tactctgatc 2100 tttgaagctc tttacatcat ggggctccct gtagcagtgg atgtagttgc cgctctcagg 2160 ctggaatatt gctaattcca ctggatcatt aggtgtccct tcaatgtcaa tccaggtagt 2220 tgccttgctg tccagtcttt tgagaccctc gagaatctgt tcttctttag catgactaag 2280 ttgagagagt cttggtgagc ctccattccg cactggtgga tgattgggac taccagtgtc 2340 tgttaagtcc acagtggtgt tgtcccaagc tctccctttg acctgtgatc tagacccgat 2400 gtaaggccac ccatcaccag atagacacaa tttatacaac aagttctcat aagggttcct 2460 ttgccctgga gcctcactga caaacatcct ttcctttgac ttcacttcca ggacagcctt 2520 tatcattgag ctgaacattg taggtttcac ttgaattgtc tcaagcatgt tgcctccgtc 2580 tagcatgcag gcccctgcct ttacagcagc agaaagactt aggttgtaac cagagacatt 2640 aatttgtgat tgttcctgtg taatgtaacc caaacaagga tattggtcag caagtttttc 2700 taaatctgac atatttgggt acttaactgt gtacaagagc ccaagtgctg acaaaccctg 2760 cacaacatca tttagtgatt caccaccctg ctcagtcatg catgccattg tcacagcagg 2820 catcgatcca aactggttta ttagaagaga gctatctttg atgtcccaca ctttaactac 2880 tccagaggga ttccctctta gttgagcaaa acccatgtct ctcaagatct ttgacctttg 2940 ctctagttgt gtggtagtta aattaccagc atatacaccc ggttgtccac taccctctac 3000 tctgagtacc ttcttcttga gcttctgtaa gtcagaagca agttccatca gctcatcttt 3060 agataaacca ccaaccctca aaacattatc cttctgtgtt gttctcatat tcattagtgc 3120 atcaacttct ttattaagat ccctcaattt tgtgaggtcg gtgtcagtcc tcttatcctt 3180 tctcatcagc ctctgtacct gtgcaactct gtcaaagtca agagctgcaa gcagagccct 3240 ggtgtcagtg atgacatcag acttcacagg attggtccaa tttgagagac ctctcctcag 3300 agcctgagtc cacctgaagg atgccacgtt atcagaagcc atatcagggt tttgagcaaa 3360 gcgtttcctt gtttgcctag gatccactgt gcg 3393 //