ID AF485261; SV 1; linear; genomic RNA; STD; VRL; 3406 BP. XX AC AF485261; XX DT 18-SEP-2002 (Rel. 73, Created) DT 20-JUN-2003 (Rel. 76, Last updated, Version 3) XX DE Parana virus strain 12056 segment S, complete sequence. XX KW . XX OS Mammarenavirus paranaense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus. XX RN [1] RP 1-3406 RX DOI; 10.1006/viro.2002.1695. RX PUBMED; 12504568. RA Archer A.M., Rico-Hesse R.; RT "High genetic divergence and recombination in Arenaviruses from the RT Americas"; RL Virology 304(2):274-281(2002). XX RN [2] RP 1-3406 RA Archer A.M., Rico-Hesse R.; RT ; RL Submitted (20-FEB-2002) to the INSDC. RL Virology and Immunology, Southwest Foundation for Biomedical Research, 7620 RL NW Loop 410 @ Military Dr, San Antonio, TX 78227, USA XX DR MD5; 72241fd530a153e272df28b92d18b0cf. DR EuropePMC; PMC2277458; 18421377. DR EuropePMC; PMC2374749; 18304671. DR EuropePMC; PMC2680969; 19478873. DR EuropePMC; PMC2714187; 18454597. DR EuropePMC; PMC3047505; 12504568. DR EuropePMC; PMC3210867; 21982818. DR EuropePMC; PMC3309595; 22377271. DR EuropePMC; PMC4111098; 24161346. XX FH Key Location/Qualifiers FH FT source 1..3406 FT /organism="Mammarenavirus paranaense" FT /segment="S (small)" FT /strain="12056" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052323" FT gene 53..1576 FT /gene="GPC" FT CDS 53..1576 FT /codon_start=1 FT /gene="GPC" FT /product="glycoprotein precursor" FT /db_xref="GOA:Q8B120" FT /db_xref="InterPro:IPR001535" FT /db_xref="UniProtKB/Swiss-Prot:Q8B120" FT /func_characterised="identical sequence" FT /protein_id="AAN09944.1" FT /translation="MGQLVTLFQSIPEIIEEAVNIALIAVAIMCIVKGTVNLWKCGIVQ FT LCIFLLLAGKRCDGFQIDRRHKLESVEFNLTRMFNNLPMSCSKNNTHHYYKGPEGTNWG FT IELTLTNESVANYSNMSAIRSLAYGNITNCDKTNEAGHTLKWLLNELHFNVLHVTRHIG FT ARCLTTDSAGILIQYNLTVGDYGGEVGRHLIASLAQIIGDDKAAWVGKCFNNCSANGTC FT RLTNCEGYTHYNYLIIQNTTWENHCSYSPMSTIRMALNKVAYSSVSRKLLGFFTWDISD FT SSGRHVPGGYCLEQWALVWAGIKCFDNSVMAKCNKDHNEEFCDTMRLFDFNQNAIKTLQ FT LNTENSINLLKRSINGLISDSLVIRNSLKQLARIPYCNYTKFWYVNDTITKRHSLPQCW FT LTYNGSYLNETHFRNDWLLESQQLYNDMLVKEYEERQGKTPIALTDICFWSLVYFTVSV FT FLQLVGIPSHRHIVGQGCPKPHRISRNGLCSCGYYNIPMKPVRWVRKGK" FT gene complement(1647..3327) FT /gene="NP" FT CDS complement(1648..3327) FT /codon_start=1 FT /gene="NP" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q8BDE5" FT /db_xref="InterPro:IPR000229" FT /db_xref="InterPro:IPR035083" FT /db_xref="InterPro:IPR035084" FT /db_xref="InterPro:IPR038115" FT /db_xref="UniProtKB/Swiss-Prot:Q8BDE5" FT /func_characterised="identical sequence" FT /protein_id="AAN09945.1" FT /translation="MSEKQVPSFRWTQALRRGLSNWTEPVKVDVIKDARAIISALDFNQ FT VAQVQRIMRKEKRTDSDLTRLRDMNKEVDALMSMRSTQHNVVLRAGGLSKDELLELSAD FT LEKLRKKVIRAEGGNPGVYQGNLTATQLNQRAELMKLVGMGPGLRSGNGVVRVWDVKDS FT SLMINQFGSMPALTIACMTEQGGETMNDVVQGLSALGLVYTVKFPNLDDLEKLSEQHPC FT LKSITQEQSQINISGYNLSLSAAVKAGACMIDGGNMLETIKMSPPMFSSIIKAVLQVKN FT REQMFVGSVGVQRNPYENLLYKLCLSGEGWPYIGSRSQIVGRAWDNTLIDLEGKPAVSP FT PPVKNGGPINLSPLSKGQEDLINQAVQKLSPKETTWIDIEGPAGDPVELAIYQPESGNY FT LHCYRAPHNESAFKDQSRYSHGLLLKDLKAARPGLISAIIKALPKGMVLTAQGSDDIEQ FT LILMHGRRDIKVVDVKLTSEHARVFEDPVWDRFNPLCEKHTGLVIKKKKKGAPPSSTNP FT HCALMDCIMFDATVTGYIRDVKPRQLIPIDLLFKDDLNLINL" XX SQ Sequence 3406 BP; 959 A; 781 C; 680 G; 986 T; 0 other; cgcacagtgg atcctaggct attgagaatc tctgcgcatt ggaatctcca agatgggaca 60 acttgtgacc ctcttccaat cgatcccaga gatcatagag gaggcagtca acattgctct 120 cattgctgtt gcaataatgt gcattgttaa aggcactgtc aacctatgga agtgtggtat 180 tgtccaactg tgcatctttc tactgttggc agggaaaaga tgtgatgggt ttcaaattga 240 taggaggcac aaactggagt cagttgagtt caacctcacc agaatgttca acaacctccc 300 aatgtcctgt agcaaaaaca acactcacca ttactacaag gggccagagg gaacaaactg 360 ggggattgag ttgaccttga ccaatgaatc tgttgctaat tactctaata tgtcagccat 420 aaggagcctt gcatatggaa acataaccaa ctgtgataag actaatgaag caggtcatac 480 cttaaaatgg ttgctaaatg agctacactt taatgtacta catgtgacac ggcacattgg 540 tgcaaggtgc ctaactacag actcagcggg catactcata cagtataact tgactgtagg 600 agattatgga ggtgaggttg ggagacactt aattgcttca ctagcacaaa ttatagggga 660 tgacaaagca gcgtgggtgg gcaaatgctt caacaactgt tccgcaaatg gtacctgtcg 720 acttaccaac tgtgaaggct acacacatta caattaccta ataattcaaa atacaacatg 780 ggaaaatcac tgtagttact caccaatgtc tactatcaga atggcactaa acaaagttgc 840 ttacagttct gtttcaagaa agctactggg ctttttcact tgggacatat ctgattcatc 900 aggaaggcat gtgccaggtg gctactgtct tgaacaatgg gcacttgtct gggcaggtat 960 aaaatgcttt gacaactcag tgatggcaaa atgcaacaaa gaccataatg aagagttttg 1020 tgatactatg agactctttg acttcaacca aaatgctata aaaactttac aattgaacac 1080 tgagaattcc atcaatcttc tgaaaaggag tattaacggt ttgatatccg attctcttgt 1140 tataagaaac agtctcaaac aattggctag aattccttat tgtaattaca caaaattctg 1200 gtatgttaat gacacaatca ctaaaagaca tagtcttcct caatgctggc tgacatacaa 1260 cggaagttat ctaaatgaaa cccactttag gaatgattgg ctgctagaaa gtcaacaact 1320 atacaatgac atgctagtca aagaatatga agagaggcag ggaaaaaccc caattgcatt 1380 gacagacatc tgcttttgga gcctagttta ttttacagtc tcagtcttct tacaacttgt 1440 agggattcca tctcaccgac acattgtggg tcaaggctgt ccaaaacccc atagaatctc 1500 tagaaatgga ttatgtagtt gtggatatta taacatccca atgaaaccag tgagatgggt 1560 taggaaaggc aaataaacta aattggcctc tgccgccctg atgtctcacc ccctttgggg 1620 gtgagacatc agggcccatg aatgtcttca taggttaatc agattcagat catctttgaa 1680 tagaaggtca atggggatga gctgtcgagg tttcacatcc cgtatgtagc cggtaacagt 1740 ggcatcgaac ataatgcaat ccatcaatgc acagtgtgga ttggtggagg atgggggagc 1800 acccttcttc tttttcttga tcaccaaccc tgtgtgtttc tcacagagtg gattgaacct 1860 atcccaaact ggatcctcaa agaccctcgc atgttcagag gtcaatttga catcaacaac 1920 cttaatatct ctcctcccat gcattaaaat cagctgttct atatcatcac tgccttgggc 1980 agtgagcacc atcccctttg gtagtgcctt tataattgca cttattaaac caggtctggc 2040 agcctttaga tcctttagaa gcaagccatg tgaataccta ctttggtctt tgaatgcact 2100 ttcattatga ggtgctctat aacagtgtaa gtagttcccg ctttcaggtt ggtaaatggc 2160 aagttccaca ggatctcctg ctggcccctc tatgtcaatc catgttgttt ctttaggtga 2220 caacttttga actgcttgat taatcaggtc ttcttgtccc ttactcagag gactcaagtt 2280 gattggacct ccatttttca caggcggagg actcactgca ggcttccctt ctaagtcgat 2340 caatgtgttg tcccaggctc tcccaacaat ttgagatctc gacccaatgt aaggccaacc 2400 ctctccactc agacaaagtt tgtaaagtag attttcatat ggattccttt gaacacccac 2460 agatcccaca aacatctgct ccctgttctt tacttgtaga acagctttta ttatggagct 2520 aaacataggt ggactcatct ttatggtctc caacatgttt cccccatcaa tcatacaagc 2580 tcccgctttc acagctgcag agagactcag attgtaacca gagatgttta tctgtgattg 2640 ttcctgggta attgatttaa gacacgggtg ttgttcactc agcttctcca agtcatcaag 2700 atttggaaat ttcactgtgt aaaccagtcc caatgcagaa agaccctgaa caacatcatt 2760 catagtctcc cccccttgtt ccgtcataca tgctattgtg agtgcaggca tcgatccaaa 2820 ctgatttatc attaatgagc tgtctttgac atcccacacc ctcacaacac catttccaga 2880 tctaagtcca gggcccattc ctacaagttt cattagttca gctctctggt ttagttgtgt 2940 tgctgttaag ttaccctggt aaacaccagg gttaccccct tcagctctta tcaccttctt 3000 tctgagcttc tccaaatctg ctgaaagttc caaaagttca tcctttgaga ggccaccagc 3060 tctcaggaca acattgtgct gagtagatct cattgacatc aaggcgtcca cctctttgtt 3120 catgtctcta agtcttgtga gatctgaatc tgttctcttc tcttttctca taatcctttg 3180 gacttgtgca acctgattga aatcaagagc agatattatt gcccttgcat cctttatcac 3240 atctacctta acaggctctg tccagttaga caggcccctc ctgagggctt gagtccaccg 3300 gaagctggga acctgttttt cagacattat ggtaagttcc aggtcttcgg ttttcccctg 3360 attcagccag aagcgtaatc caattcagcc taggatccac tgtgcg 3406 //