ID   AF484118; SV 1; linear; genomic RNA; STD; VRL; 1032 BP.
XX
AC   AF484118;
XX
DT   01-APR-2002 (Rel. 71, Created)
DT   21-APR-2010 (Rel. 104, Last updated, Version 3)
XX
DE   Rice tungro spherical virus coat protein gene, partial cds.
XX
KW   .
XX
OS   Rice tungro spherical virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Waikavirus.
XX
RN   [1]
RP   1-1032
RX   DOI; 10.1016/j.jviromet.2006.01.010.
RX   PUBMED; 16490261.
RA   Periasamy M., Niazi F.R., Malathi V.G.;
RT   "Multiplex RT-PCR, a novel technique for the simultaneous detection of the
RT   DNA and RNA viruses causing rice tungro disease";
RL   J. Virol. Methods 134(1-2):230-236(2006).
XX
RN   [2]
RP   1-1032
RA   Periasamy M., Malathi V.G., Niazi F.R.;
RT   "Nucleotide Sequence of Rice Tungro Spherical Virus (RTSV) Coat Protein
RT   Gene (CP3) of RTV3 strain from India";
RL   Unpublished.
XX
RN   [3]
RP   1-1032
RA   Periasamy M., Malathi V.G., Niazi F.R.;
RT   ;
RL   Submitted (15-FEB-2002) to the INSDC.
RL   Advanced Centre for Plant Virology, Division of Plant Pathology, Indian
RL   Agricultural Research Institute, Pusa Road, New Delhi, Delhi 110012, India
XX
DR   MD5; d062fd3623edb0a933475e718ab39211.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1032
FT                   /organism="Rice tungro spherical virus"
FT                   /lab_host="rice cv. TN-1"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Dhaniakhali, West Bengal"
FT                   /note="collected in 1972; produces severe symptoms of
FT                   tungro disease on susceptible varieties"
FT                   /db_xref="taxon:35287"
FT   CDS             <1..>1032
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP3"
FT                   /db_xref="GOA:Q8QRL4"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QRL4"
FT                   /protein_id="AAL99540.1"
FT                   /translation="DFGRSLSCSRLLGNGFKEWCSRESLLMRVPLKNGKKRAFKYAVTP
FT                   RMRTLPPEATSLSWLSQIFVEWRGSLTYTIHVQSGSAIQHSYMRIWYDPNGKTDEKEVK
FT                   FLDSAHPPAGIKVYHWDLKIGDCFRFTVPYCARTEKLQIPKAYASTPYEWLTMYNGAVT
FT                   FDLRSGADMELFVSIAGGDDFEMFEQTVPPKCGSVSDSYAVLSYADDVKSVTEVPNKTT
FT                   YLADEQPTTSAPRTSTADTDEDPPTEGEIARTSNGTLVQYREGAWKPMVERAPTMSKKQ
FT                   VGPELKVSDPHMYKCIKNMNKNVKVLTDRQCTAKLADIVDSAQELVGSNSTFVEDLAVG
FT                   AKQI"
XX
SQ   Sequence 1032 BP; 278 A; 233 C; 281 G; 240 T; 0 other;
     gattttggaa gaagcctatc gtgttcgcgt cttcttggta atggatttaa agaatggtgc        60
     tcccgagagt cgttgttgat gagggtccct cttaaaaatg gaaagaaacg agccttcaag       120
     tatgccgtga ctccccggat gcgaactctg cctcctgaag ccacaagcct tagctggttg       180
     agccaaattt ttgttgagtg gcgcggatct ctgacttata ctattcatgt ccaatctgga       240
     tccgctattc aacactcgta catgcgcatc tggtatgacc ccaatggcaa aactgatgaa       300
     aaggaggtca aatttcttga cagcgcgcat ccaccagcag ggatcaaagt gtaccactgg       360
     gacctcaaaa taggagactg ctttcgcttc accgtcccat actgtgcaag aacagagaaa       420
     ttgcagatcc cgaaggctta tgcgtcaaca ccgtacgagt ggctcacgat gtacaatgga       480
     gcggtgacat ttgatttgcg cagtggtgcc gacatggagc tcttcgtctc gatcgctgga       540
     ggagatgatt ttgagatgtt tgaacagacc gtgcctccaa aatgtggttc agtgagtgat       600
     tcatacgctg tcctatcata tgcagacgat gttaagagcg taacggaggt gccgaacaag       660
     accacgtact tggcagatga gcaaccgaca acctcggcac ctcgtacgtc tactgcggat       720
     actgatgagg acccaccgac tgagggagag attgcgagga cttcaaatgg aactcttgtg       780
     cagtaccgtg aaggagcgtg gaagccaatg gtggaacgtg cgccaacgat gtcaaagaag       840
     caagtgggtc cggagcttaa ggtgtcagac cctcacatgt acaagtgcat taagaatatg       900
     aacaagaatg tgaaggtttt gaccgacaga cagtgcaccg cgaagttggc agacatagtg       960
     gactcagccc aggagcttgt tggaagcaat agcacttttg tcgaggattt ggcagtgggc      1020
     gccaagcaga tc                                                          1032
//