Dbfetch
ID AF461742; SV 1; linear; genomic RNA; STD; VRL; 5698 BP. XX AC AF461742; XX DT 22-FEB-2002 (Rel. 70, Created) DT 08-FEB-2010 (Rel. 103, Last updated, Version 2) XX DE Euprosterna elaeasa virus, complete genome. XX KW . XX OS Euprosterna elaeasa virus OC Viruses; Riboviria; Permutotetraviridae; Alphapermutotetravirus. XX RN [1] RP 1-5698 RX DOI; 10.1016/j.virol.2009.10.042. RX PUBMED; 19954807. RA Zeddam J.L., Gordon K.H., Lauber C., Alves C.A., Luke B.T., Hanzlik T.N., RA Ward V.K., Gorbalenya A.E.; RT "Euprosterna elaeasa virus genome sequence and evolution of the RT Tetraviridae family: emergence of bipartite genomes and conservation of the RT VPg signal with the dsRNA Birnaviridae family"; RL Virology 397(1):145-154(2010). XX RN [2] RP 1-5698 RA Zeddam J.-L.A., Pringle F.M., Gordon K.H., Ward V.K., Luke B.T., RA Gorbalenya A.E., Hanzlik T.N.; RT "Genome organization of Euprosterna elaeasa virus defines it as a member of RT a new group of insect RNA viruses"; RL Unpublished. XX RN [3] RP 1-5698 RA Zeddam J.-L.A., Gordon K.H., Hanzlik T.N.; RT ; RL Submitted (20-DEC-2001) to the INSDC. RL Insect Virology, IRD, Route de Montpellier, Saint-Christol-les-Ales 30380, RL France XX DR MD5; 962d7c82f4d43bf6e5904141e2dee152. DR EuropePMC; PMC5127029; 27869772. XX FH Key Location/Qualifiers FH FT source 1..5698 FT /organism="Euprosterna elaeasa virus" FT /mol_type="genomic RNA" FT /note="isolated from larvae of Euprosterna elaeasa, Dyar FT (Lepidoptera: Limacodidae)- a major defoliating pest of FT oil-palms in several Latin American countries" FT /db_xref="taxon:186165" FT CDS 95..3868 FT /codon_start=1 FT /product="putative replicase" FT /db_xref="UniProtKB/TrEMBL:Q8QYM6" FT /protein_id="AAL78970.1" FT /translation="MEASNPVIAPTRLSLEAMLEERASVVRQDLQSLRVRLEGAPRTLA FT PQAPEKQGRDSAQAAAKSIVTELRDAVKEAQGLEHKSLDFLEQLGEYPVCGIIHGDHPI FT HPSGTNNNKGKVSVQRQFTTSMNSVDALQVALRYEDVPLVRDIALKTTYTDGSLAGFVE FT RLKLQTTRPCVQEKVSRRLLRELFPYDPQKLVDVSRELSDLVLEIKTNATASAGPPYWR FT SKRDALPDMLDCVLPLLYQHIVDGDLATLKNKHPELFLAECKNKTDRYEVEKLGEKTRP FT YFSHPFHLSALVSVLSQSFSKALKIMTEESTSYNAYGFSWTNGGAEDLVIWARGAGEVG FT KEPPRIACYGDDTDIYYRQKGRLYRICPDFKQMDGSVDETTIKAVVDYVVHAHTSQYPL FT AKGFWLEVGKLWVEMATSSPFLIDGTLVYRKKQKDGLMTGVVGTTLFDTVKSALAYKDW FT ADQLLFGDLELLKEKKAIKFFKEKHGLVIKEGTWNPTAVTEDPGYDELWTEQKFLGLQI FT KVVKHADTDEKVFVPTLPYSDWLSMWVTPRARLGHKESYTMRQRTLFDRARGLLVTGAA FT FDKQARELMGSVINETPSEIVCMKVQEGGGRGAPPSYAFLTRDGNFEFPVSDGFPDLAW FT TTRLYSRDQTGDMPRVFPDAVTLIAAYRKRLMDTRIAVKEGNVSYLMEVAVAETGLNME FT MPAEAVVLPPKPPSIQKPREFTYAENVSTSTGSLVVKKVDKVPDSAGTLETIFQKFMES FT VNKQIEELRAGQEKIERTIIMGAALPAEAIRKKMGNVDLRKTAEKAALFTHEEAGDLYL FT STNPVLGHPDSFESGERAKEVHKVIGKHSTPERKAREKAEPVHDTGEFVKITGPAPGGV FT PTQCEPGQTPWYSLCRSVSKAGYQVTTRTEPGLDHNGRPFVRAVVLQRNMRLKPQPWQE FT WLVSTGRSLARAKELASDYALELVQRERYKQPLDATTSWAEDAELGDTIQLLDRGRHVF FT SLIGERFERVNPGIGTKHQLTDRGDLMVWQPASGTYVVVAPPRKTRSGARSRTLASMVK FT SVVRANVDLRVRTAGEPFFRDPVELSNLKKKINENKNEAFHESEDLRSEPEEYQRGPSS FT SFHEDSPRAGDEHSDARQHDRVPHVQQLSTKLQGENRLEARDARRDRREPSLDKEGAEV FT PQVPSGRPSYRPSLRDPNPRVQQLEEQVRSLQAQITTIAGVRPAPPRGGARKSGNMWRR FT GGESRAPQRGPGAPGSGGGASQNRKPRGPKSW" FT CDS 3336..5606 FT /codon_start=1 FT /product="capsid protein precursor" FT /db_xref="InterPro:IPR005313" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8QYM5" FT /protein_id="AAL78971.1" FT /translation="MKIRMRLSMNQKILEANLRNIKEGHPLAFMRTAQGREMSIAMLAN FT MIVCPTCNNSLRNYKERTDWRRGTLDEIEENLAWIKRELRCLRCPPDDHLIDQACGIPT FT PESSNSKSKSVHFKHRSRRLPESAQLPQGAGRGSLVTCGDVEENPGPPSVARGLQEVVA FT GLAKTGSPEARNPGKQARRRRRRRTVKGTGNPNQPFAVTAGAALTRVPALRGTLAMSEP FT ISPSSVGWLETNLDPCGEYKSTLDYGKVPDGAIPMSVCGQFRETFTIRHPGANPMVAPL FT DGTMWTLGIIRTNLWRTPFLLIADMRNAEISDSSLDEVARSFNNYVGEIELASHPNWVE FT TLQEGLYWSIQRWTALIGVPPPSDTGVSPYITDFRMTGSGFTVSSNTPSLINQGMVVVA FT QFNPNTENKEIVPHSESGETPMGWSRVYSLSTSQIVTTYIQPGVGGAQNTFTVIANRGP FT AVINSSVLPAVTQGYRFLNGDTYAVGDSLRYQFTERDSGGYTVYLQRSTDGTTFTNIGP FT PSTTTAAPSGTSTASGVGFILEGDVLAGRVNMLTLPPFTQSDLMQQTPKTCVFQIKEGG FT FYVRQDVWQPVYNMTPASRYAPVRFVSGAITLDSLNSSVGTIRDTADSNYGFALCHMTS FT IPLACAPFIKAEMRFEAVPGRNSPWGLFATSTPPKDEVALTISRTVMDLEPFAMPLAYN FT GWGLMFSKIINIVRKVPKVLRTASNVADVVANCVEDAQAGATRVYESVRGRRGAMRDMT FT LQQ" FT mat_peptide 3336..3785 FT /product="small putative peptide" FT /note="not encapsidated in the mature virion" FT mat_peptide 3786..5420 FT /product="large capsid protein" FT mat_peptide 5421..5603 FT /product="small capsid protein" XX SQ Sequence 5698 BP; 1385 A; 1357 C; 1616 G; 1340 T; 0 other; aggtccacct ttcttgtata agaaaggtgg tgattcgctt acctttgacc cagttcttta 60 actcccacaa ccttagacaa cttgatgata aaatatggaa gccagtaacc ccgttatagc 120 gccaacccgc ttaagtttgg aagctatgtt agaggaaaga gcatctgttg ttcgtcaaga 180 tctacaaagt cttagggtga gactggaggg ggcgcccagg acgttggccc cccaagcacc 240 cgaaaaacag gggagggaca gcgcccaagc cgccgccaag agcattgtga cggagcttcg 300 ggacgctgtc aaagaagcgc aaggtctgga gcataagagc ctagactttt tggaacaact 360 gggtgagtat cccgtgtgtg gtattataca cggggaccat cctatccacc cctccggcac 420 taacaacaat aaagggaaag ttagcgtcca gagacagttc acaacaagta tgaacagtgt 480 ggacgctctc caggtggccc tcaggtatga agacgttcct ttggtgagag atatcgcctt 540 aaaaacgaca tacactgatg gttcccttgc cggctttgtg gagcgcttaa agctgcagac 600 cacgaggccg tgtgtgcagg agaaggttag ccggcgtctg ctccgggagc tgtttccgta 660 tgaccctcag aaactggtag atgtttcgcg ggagctgtcg gatttagtcc tggaaattaa 720 aacgaatgcg actgcatcgg ctgggccccc atattggagg tccaagcgag acgcccttcc 780 ggatatgttg gattgtgtgt tgccgctgtt gtatcaacac attgtggatg gtgatctcgc 840 cactttaaag aataaacacc cggagttgtt tttggctgag tgtaagaaca aaacggaccg 900 ctatgaggtc gaaaaactgg gggagaagac aaggccctat ttctcccacc cgtttcatct 960 ctccgctttg gtttctgtct tgtcccagag tttttcaaaa gcgctgaaga taatgacgga 1020 ggagagcacg tcttataacg cctatggttt tagttggacc aatggaggag cagaagatct 1080 cgttatatgg gcgcgaggag cgggggaagt tggaaaagaa cccccgagaa tcgcctgtta 1140 tggtgatgat acagatatat attatcgcca gaagggccgt ctgtaccgca tttgcccgga 1200 ctttaagcaa atggatggta gtgttgatga gaccactata aaagccgtgg tcgattacgt 1260 tgtacatgcc cacactagtc agtaccctct ggcgaagggg ttctggcttg aagttggaaa 1320 gttgtgggtt gagatggcca cgtcttcgcc ttttctgata gacggaactt tggtctacag 1380 gaaaaagcag aaagacgggc tgatgacggg tgtcgttggg acgacgctat tcgacacggt 1440 gaaaagtgcc ctagcctata aggactgggc cgatcagctc ctcttcgggg atcttgagtt 1500 gttgaaggag aaaaaggcga tcaagttctt caaggagaag cacggcttgg ttatcaaaga 1560 gggcacctgg aatccaactg ctgtgacaga ggatccgggt tatgatgagc tgtggacaga 1620 acagaagttt ttaggtctgc agatcaaagt agtaaaacat gcagatacag acgaaaaggt 1680 ctttgtgccc accctgccgt actctgactg gctctctatg tgggtgaccc ctcgtgctcg 1740 tttggggcac aaggagtcgt atactatgcg ccagagaacg ttgtttgatc gcgcccgcgg 1800 gcttttagtt acaggtgctg cttttgacaa gcaggcccgc gaattgatgg gttcggttat 1860 aaatgaaaca ccctctgaaa tagtgtgcat gaaggttcaa gaggggggag gccgtggggc 1920 ccccccttcc tatgccttcc tgacacgcga tgggaacttt gagttccctg tttcagacgg 1980 ttttcctgat ttagcgtgga cgacacgctt gtatagccgt gatcaaaccg gtgacatgcc 2040 ccgtgtcttc cctgatgcgg taaccctgat agccgcgtac cgtaaacgtt tgatggatac 2100 gcgtatagct gtgaaagagg gcaacgtttc ctatttgatg gaagttgcag tggcggagac 2160 cggcctcaat atggagatgc cggcggaggc tgttgtgttg cccccgaagc ccccttccat 2220 tcaaaagccg cgggagttta cctacgcgga aaatgtctca acgtctacgg gctctttggt 2280 ggtcaagaag gtagataaag tgccggactc agccggcacc ttggagacca tcttccagaa 2340 gtttatggag tctgttaata aacagataga agagctccgt gccgggcagg agaagattga 2400 gcgcaccatt attatgggtg cggctctccc tgctgaggcg attaggaaga aaatgggcaa 2460 cgttgacctg cgaaagacgg ctgaaaaagc cgccttattc acgcacgagg aagctggtga 2520 cctgtatttg tcaaccaacc ctgtgctcgg tcaccctgat tcttttgagt ccggggaaag 2580 agctaaggag gtgcataagg tcattgggaa gcatagcaca ccagagcgaa aagccagaga 2640 gaaggcggag cctgttcatg acacaggaga gtttgtgaag ataacgggcc ctgcccctgg 2700 aggcgtacct acccagtgtg aacccggtca gacaccgtgg tattccctgt gtagaagtgt 2760 gagcaaagca gggtatcaag tgacaacgag gacggagccc ggtttggacc ataacgggcg 2820 gccgtttgtg agagctgtgg ttttgcaaag gaatatgcgc cttaaacccc agccgtggca 2880 ggagtggctg gtgtcgacgg gccggtctct tgctagggcg aaggagttag cgagtgatta 2940 cgctctggag cttgttcaaa gagagcgtta taaacagcct ttggatgcca cgactagctg 3000 ggcagaagat gccgagttag gtgacactat tcagctcctc gatcggggtc gacatgtgtt 3060 ctcccttatt ggggagaggt ttgagcgggt taaccccgga ataggaacta aacaccagct 3120 aacagacagg ggggacttga tggtttggca acctgcaagt ggcacttacg ttgttgtggc 3180 ccccccccgc aaaactagaa gcggggcaag atctcgcact cttgcctcga tggtgaagtc 3240 ggtagtgcga gctaatgtgg acctgcgggt gaggaccgca ggcgaaccct tctttaggga 3300 cccagttgaa ctttccaatt tgaaaaagaa aattaatgaa aataagaatg aggctttcca 3360 tgaatcagaa gatcttagaa gcgaacctga ggaatatcaa agagggccat cctctagctt 3420 tcatgaggac agcccaaggg cgggagatga gcatagcgat gctcgccaac atgatcgtgt 3480 gccccacgtg caacaactct ctacgaaact acaaggagag aacagattgg aggcgaggga 3540 cgctcgacga gatagaagag aacctagctt ggataaagag ggagctgagg tgcctcaggt 3600 gccctccgga cgaccatctt atagaccaag cttgcgggat cccaaccccc gagtccagca 3660 actcgaagag caagtccgtt cacttcaagc acagatcacg acgattgccg gagtccgccc 3720 agctccccca aggggcgggg cgcggaagtc tggtaacatg tggcgacgtg gaggagaatc 3780 cagggccccc cagcgtggcc cgggggctcc aggaagtggt ggcggggcta gccaaaacag 3840 gaagccccga ggcccgaaat cctggtaagc aagcgaggag gcggcgtcgg cgtagaaccg 3900 ttaaaggcac gggaaatccc aatcagcctt ttgcggttac cgctggcgcc gctctaacgc 3960 gggtcccggc gttgcgtgga actctcgcga tgtcggaacc catctcacct tcgtcggtag 4020 gttggttgga gaccaacctt gacccatgtg gtgagtataa gtcgacccta gactatggta 4080 aggtgcctga tggtgccatc cctatgtcgg tttgtggtca gtttagagag actttcacga 4140 tccgacatcc tggggccaac ccaatggtgg cccctttgga tggcaccatg tggacccttg 4200 gtataatccg gactaattta tggaggactc cgtttctctt gattgcagac atgaggaatg 4260 ctgaaatatc cgattcatct ctagatgagg tagctcggtc tttcaacaat tatgtcggcg 4320 agattgaatt agcgtctcac ccgaattggg ttgagacctt gcaggagggc ctgtattggt 4380 ccatccagcg gtggacggct ttaataggcg tcccacctcc cagtgatacg ggggtttctc 4440 cctatatcac tgatttccgg atgacaggtt cgggatttac tgtgtcttcc aacaccccat 4500 ctcttattaa tcaagggatg gtggtggtgg cacagtttaa cccgaacact gagaacaagg 4560 agatagtacc ccattctgag tctggggaga ctccgatggg gtggtctcgg gtttattccc 4620 tatcaacgtc acagatagtt acgacttata ttcaaccagg ggtgggaggt gcccagaata 4680 ccttcacagt cattgccaat agagggcctg ctgtaattaa tagctcggtt ctccctgctg 4740 tcactcaagg ttaccgtttt ttaaatggag acacgtatgc agttggggac tccctccgat 4800 atcagtttac ggagcgagac tcaggcgggt atacagtcta tctgcaaagg tcaactgatg 4860 gtacgacctt tacaaatatt ggcccgccgt cgacgacaac tgctgcccca tctggcactt 4920 caacggcttc tggggtgggt ttcatcctag aaggtgatgt tttggccgga cgtgtgaata 4980 tgttaacctt accgcccttt acccagtctg atctgatgca acagacccca aagacgtgtg 5040 tgttccagat caaagagggt ggtttttatg tgcgccagga tgtttggcaa cccgtctata 5100 atatgacccc agccagccgt tatgcccccg ttcgatttgt gtcgggagca ataactttag 5160 atagcctgaa ttcttctgta ggaactatcc gcgatacagc agactctaac tatgggtttg 5220 cgctgtgtca catgacctcg ataccgttgg cgtgcgcccc ttttattaaa gctgagatgc 5280 gctttgaagc ggtgccaggt cggaactctc cctgggggct ttttgccacc tccactcccc 5340 ccaaggatga agttgcgttg accatatcac gcacggtcat ggacttagaa ccttttgcca 5400 tgccccttgc ctataatggg tggggcttga tgttctcaaa aatcatcaat atagtacgca 5460 aggttccgaa ggtcctccgc acagcgagca acgttgctga tgttgttgct aactgcgtgg 5520 aggacgccca agctggtgcc acccgagttt atgagagtgt gcgggggcgc cgaggggcta 5580 tgcgagatat gaccctacag cagtgagcgg agacaaatta agggccttct gccccgcgtg 5640 aaccgctcct tttattttct ttttataaac cataatcaat aaatcctttt tccacgcg 5698 //