Dbfetch
ID AF459812; SV 1; linear; genomic RNA; STD; VRL; 1900 BP. XX AC AF459812; XX DT 22-JAN-2002 (Rel. 70, Created) DT 17-APR-2003 (Rel. 75, Last updated, Version 2) XX DE Rice black streaked dwarf virus isolate zhjs segment 9, complete sequence. XX KW . XX OS Rice black streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-1900 RX DOI; 10.1023/A:1020170020581. RX PUBMED; 12416683. RA Bai F.W., Yan J., Qu Z.C., Zhang H.W., Xu J., Ye M.M., Shen D.L.; RT "Phylogenetic analysis reveals that a dwarfing disease on different cereal RT crops in China is due to rice black streaked dwarf virus (RBSDV)"; RL Virus Genes 25(2):201-206(2002). XX RN [2] RP 1-1900 RA Bai F., Qu Z., Xu J., Yan J., Zhang H., Ye M., Shen D.; RT ; RL Submitted (17-DEC-2001) to the INSDC. RL R.China XX DR MD5; 48779865416f3a7d052ee9422adce610. DR EuropePMC; PMC4015479; 24131521. DR EuropePMC; PMC4379580; 25807053. DR EuropePMC; PMC6486993; 31029143. XX FH Key Location/Qualifiers FH FT source 1..1900 FT /organism="Rice black streaked dwarf virus" FT /segment="9" FT /isolate="zhjs" FT /mol_type="genomic RNA" FT /db_xref="taxon:10990" FT CDS 52..1095 FT /codon_start=1 FT /product="unknown" FT /note="ORF1" FT /db_xref="InterPro:IPR009268" FT /db_xref="PDB:3VJJ" FT /db_xref="UniProtKB/TrEMBL:Q913E4" FT /protein_id="AAL66344.1" FT /translation="MADQERRTFGSYKIEELTIKNDQPNRNTNSSTSQSTENRLSTKKI FT PLLDDGIFELLNYLIDGTNFDKTCYCGFNYSHLPNLERDFNVASIYVRENFELCTENLD FT LKDYDRQANISVKSPDFTLLLEYTLKPSSETDPTIPENEKEENSKPVTPKVVTPKEEKK FT TVEMSLLPILNRESEESLSSEILEGEAAVVNVFKMYIKGFLMYLGENPNSYDRQLNIEK FT YRPLLISIIGYEHLIGTRVPNKEVNHIFYQLATFDNYPFDLLRFQLSSLISTPALIREK FT IAKEGLFKIITSNTLRGASRQTVLFRGINGSESFLNIKRYRKFRTRIVGNVDCVIKSDF FT SSLKLDV" FT CDS 1160..1789 FT /codon_start=1 FT /product="unknown" FT /note="ORF2" FT /db_xref="GOA:Q913E3" FT /db_xref="InterPro:IPR009650" FT /db_xref="UniProtKB/TrEMBL:Q913E3" FT /protein_id="AAL66345.1" FT /translation="MNPQSSVNVDTYTFNCPFELAKIQIESMKPIMQDFSNFDDIFNRA FT LSDSEIDDRVEQLEVDVESKVDPIVRRRYGKIGHIIIMIISFVFFGIFKLTLKMFYHLF FT RCVCCNPLIRGILSIIFTILFYFLLCVCIYFVYYFFGDQISLAYNTLNQIDSSNFINST FT QVEEKVKNIIHDGSLFFGTRDQATGQINEIETQVVNGGTVNYTLFN" XX SQ Sequence 1900 BP; 609 A; 325 C; 311 G; 655 T; 0 other; aagtttttaa gcctggaact gacacattcc tacaggaacg agcgtaagag aatggcagac 60 caagagcgga gaacgtttgg atcatataaa atagaagaat tgacaattaa aaacgaccaa 120 ccaaatagaa atacaaattc atcgacctct caatctaccg aaaatcgtct ttcaaccaag 180 aaaatccccc tactcgatga cggcatcttc gaacttttga actaccttat tgatggaacc 240 aacttcgaca aaacttgcta ttgtggtttt aattattctc atctccctaa ccttgaacgt 300 gactttaacg ttgcatctat ttacgtccgc gagaattttg aattatgcac tgaaaactta 360 gatttgaaag attatgatag acaggcaaat ataagcgtga aatctcctga ttttactttg 420 cttctagaat atactcttaa accatcatca gaaaccgatc ctactattcc agagaatgag 480 aaagaagaga attctaaacc agttactcct aaagttgtca ctccaaaaga agagaagaaa 540 acagttgaaa tgtcgttgtt gccaattctg aaccgtgaat ctgaagaatc tttaagctct 600 gaaattcttg aaggtgaagc tgctgttgtt aatgtattca aaatgtatat aaaaggcttt 660 ttaatgtatt tgggtgaaaa tccaaactct tatgatcgtc aattaaacat agaaaagtat 720 cgtcctttgc taatttcaat catcggatat gaacatctca tcggaacaag agttccaaat 780 aaagaagtta atcacatttt ttaccagttg gcgacttttg ataactaccc ttttgaccta 840 ctgagattcc agctttcttc actcatctct acacccgctt taatccgaga aaaaattgct 900 aaagaaggat tgttcaagat tattacgtca aacaccctgc gtggtgcttc ccgtcaaact 960 gtcttattta gaggaattaa tggaagtgaa tcgtttttga acatcaagag atatcgtaaa 1020 ttcaggacac gaattgttgg caatgttgat tgcgttatta aatctgattt ttcttccttg 1080 aaattggacg tttgatcttt tactttttat gttctgaaaa ttgaatatca ctggttaatg 1140 aatcatttcc tttaatttta tgaatcccca atcttcagta aatgttgata cttatacttt 1200 taactgtccc tttgaactag caaaaattca aattgaatcg atgaaaccta ttatgcaaga 1260 ttttagcaat tttgatgata tctttaatcg tgcattatct gattctgaaa ttgatgatcg 1320 cgtagaacag cttgaagttg acgtcgaatc aaaagtcgat ccaattgtga gaagaagata 1380 tggtaagatt ggacatatca tcattatgat tattagtttt gtattttttg gtatttttaa 1440 gcttactctt aagatgtttt atcatttgtt tcgttgtgta tgttgtaatc ctttgattag 1500 aggtatactt agtatcattt ttaccatatt attttacttt ctactgtgtg tgtgcattta 1560 ttttgtttat tacttttttg gagatcaaat ttcattagcg tacaatactt tgaatcaaat 1620 tgatagttct aattttataa attctactca agttgaagaa aaagttaaaa acataattca 1680 cgacggttca ctttttttcg gtactcgtga tcaagcaaca ggtcaaatta acgaaattga 1740 aactcaagtt gtaaatggtg gtactgtaaa ctatacgctt tttaattaac gtctattttg 1800 tatgactctg aaaatattca cgctcgcaag tcgattctct tacagttatg tcttttgagg 1860 tatgacaaac tcgttctcaa gccggcttac agctatcgtc 1900 //