Dbfetch

Dbfetch

ID   AF453405; SV 1; linear; genomic RNA; STD; VRL; 933 BP.
XX
AC   AF453405;
XX
DT   05-FEB-2002 (Rel. 70, Created)
DT   19-JUN-2002 (Rel. 72, Last updated, Version 3)
XX
DE   Potato leaf roll virus isolate 14.1 P0 gene, complete cds; and P1 gene,
DE   partial cds.
XX
KW   .
XX
OS   Potato leafroll virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-933
RX   PUBMED; 12075102.
RA   Guyader S., Ducray D.G.;
RT   "Sequence analysis of Potato leafroll virus isolates reveals genetic
RT   stability, major evolutionary events and differential selection pressure
RT   between overlapping reading frame products";
RL   J. Gen. Virol. 83(Pt 7):1799-1807(2002).
XX
RN   [2]
RP   1-933
RA   Guyader S., Giblot Ducray D.;
RT   ;
RL   Submitted (29-NOV-2001) to the INSDC.
RL   UMR BiO3P, Institut National de la Recherche Agronomique, Domaine de la
RL   Motte, BP 35327, Le Rheu 35653, France
XX
DR   MD5; 67b518a6c080ecab021cb3fd66df2637.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..933
FT                   /organism="Potato leafroll virus"
FT                   /isolate="14.1"
FT                   /mol_type="genomic RNA"
FT                   /country="France"
FT                   /db_xref="taxon:12045"
FT   5'UTR           <1..53
FT   CDS             54..797
FT                   /codon_start=1
FT                   /product="P0"
FT                   /note="ORF0"
FT                   /db_xref="GOA:Q8V225"
FT                   /db_xref="InterPro:IPR006755"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V225"
FT                   /protein_id="AAL73429.1"
FT                   /translation="MIVLTQSGTLLFDQRFKLSKFLFVVIATGFPLLLQQASLLYGYNH
FT                   EQIYRICRSFLYVLPLLNCKRGRISTSGLQLPRHLHYECLEWGLLCGTHPAIQIVGPSI
FT                   IVELDNPTTAAAYRSELLRISSSSYVKNSAGFSNGWGHDMEAFVRNAICLLELRERSIP
FT                   QSGLRNLMGNYNHLVRSLLDACTVDYFVPLDFQHRSLMLNFARLYNQLDLQGRAKSFRA
FT                   LTGLPVYVPSEDYLEGSFLQKELQE"
FT   CDS             187..>933
FT                   /codon_start=1
FT                   /product="P1"
FT                   /note="polyprotein; contains proteinase and VPg; ORF1"
FT                   /db_xref="GOA:Q8V224"
FT                   /db_xref="InterPro:IPR000382"
FT                   /db_xref="InterPro:IPR018019"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V224"
FT                   /protein_id="AAL73430.1"
FT                   /translation="MNRFTAFAALFFMFSLCSTAKEAGFLHPAFNFRGTSIMSVSSGDY
FT                   SAAPTPQYKSWALPSLSNSTTPPPPLLTDRSYYELVQALMSKIRLDFQMVGDMTWRHLS
FT                   EMLFASWNSVREVSLRAASVTLWAIITIWFGLYWTLARLITLFLWTFSIEALCLILLGC
FT                   ITSLIYKGALSLSEHLPVFLFMSPLKIIWRAAFSKRNYKNEKAVEGYKGFSVPQKPPKS
FT                   AVIELQHENGSHLGYANCIRLYSGENA"
XX
SQ   Sequence 933 BP; 234 A; 230 C; 197 G; 272 T; 0 other;
     gaaattgcag ctttagcgca taaactttac actcattgcg aacgttatag catatgattg        60
     tattgactca gtctggaacc ttgcttttcg accaaagatt caaactttca aagtttcttt       120
     ttgttgtcat tgcaacaggt tttcctcttc tcctgcaaca agcgagctta ctttacggtt       180
     acaatcatga acagatttac cgcatttgcc gctcttttct ttatgttctc cctttgctca       240
     actgcaaaag aggcaggatt tctacatccg gccttcaact tccgaggcac ctccattatg       300
     agtgtctcga gtggggatta ctctgcggca cccaccccgc aatacaaatc gtgggccctt       360
     ccatcattgt cgaactcgac aaccccacca ccgccgctgc ttacagatcg gagctactac       420
     gaattagttc aagctcttat gtcaaaaatt cggctggatt ttcaaatggt tggggacatg       480
     acatggaggc atttgtcaga aatgctattt gcctcctgga actccgtgag agaagtatcc       540
     ctcagagcgg cctccgtaac cttatgggca attataacca tttggttcgg tctctattgg       600
     acgcttgcac ggttgattac tttgttcctc tggactttca gcatagaagc cttatgctta       660
     attttgctcg gttgtataac cagcttgatc tacaagggcg cgctaagtct ttcagagcac       720
     ttaccggtct tcctgtttat gtcccctctg aagattattt ggagggcagc tttctccaaa       780
     aggaattaca agaatgagaa agctgtggaa ggatacaaag ggttttcggt cccacagaaa       840
     ccgccaaagt ctgccgtaat tgaactacaa catgaaaacg gcagccatct cgggtacgcg       900
     aactgcattc gcttgtacag tggagagaac gcc                                    933
//