ID AF435014; SV 1; circular; genomic DNA; STD; VRL; 3705 BP. XX AC AF435014; XX DT 14-NOV-2001 (Rel. 69, Created) DT 31-OCT-2009 (Rel. 102, Last updated, Version 3) XX DE Torque teno virus 6 isolate KAV, complete genome. XX KW . XX OS Torque teno virus 6 OC Viruses; Anelloviridae; Alphatorquevirus. XX RN [1] RP 1-3705 RX DOI; 10.1006/bbrc.2001.6089. RX PUBMED; 11741280. RA Heller F., Zachoval R., Koelzer A., Nitschko H., Froesner G.G.; RT "Isolate KAV: a new genotype of the TT-virus family"; RL Biochem. Biophys. Res. Commun. 289(5):937-941(2001). XX RN [2] RP 1-3705 RA Heller F., Zachoval R., Nitschko H., Froesner G.G.; RT ; RL Submitted (17-OCT-2001) to the INSDC. RL Virology, Max von Pettenkofer Institut, Pettenkoferstrasse 9a, Muenchen RL 80336, Germany XX DR MD5; fdfef0b28661df0813749abaf421dce9. DR EuropePMC; PMC434092; 15220423. XX FH Key Location/Qualifiers FH FT source 1..3705 FT /organism="Torque teno virus 6" FT /isolate="KAV" FT /mol_type="genomic DNA" FT /country="Germany" FT /note="isolated from patient with chronic HCV infection FT genotype: 28" FT /db_xref="taxon:687345" FT regulatory 82..86 FT /regulatory_class="TATA_box" FT gene 344..2942 FT /gene="ORF4" FT CDS join(344..717,2495..2942) FT /codon_start=1 FT /gene="ORF4" FT /product="ORF4" FT /db_xref="InterPro:IPR004118" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/Swiss-Prot:Q914N2" FT /protein_id="AAL28137.1" FT /translation="MSWRPPAHNAEGQEGLWYRSVCQSHGAFCGCGDFVGHLNRLAERL FT GRPQPPRPPGGPPGPAIRVLPALPPAEGSPRRHNRTENQPCGGGDADFGDQRDAGDGGA FT AADDLSPADVEDLLDWLDAPESKTPKNRGPRGRCRRRLTFQGEKTPSLARLDLGRNRER FT SRSPRREDATGAAPTAAQRATTAQMRNPVHVPAINKNAASPPRPSYPSISPKALLFPER FT LPQMWTKQDWETEQQAAAVWDRPMRNNLTDPPFYPWMPRYRVSLRLGFNPQ" FT gene 344..2713 FT /gene="ORF3" FT CDS join(344..717,2293..2713) FT /codon_start=1 FT /gene="ORF3" FT /product="ORF3" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/Swiss-Prot:Q914N3" FT /protein_id="AAL28136.1" FT /translation="MSWRPPAHNAEGQEGLWYRSVCQSHGAFCGCGDFVGHLNRLAERL FT GRPQPPRPPGGPPGPAIRVLPALPPAEGSPRRHNRTENQPCGGGDADFGDQRDAGDGGA FT AADDLSPADVEDLLDWLDAPELSKTPVNNPPLTSPVPVESLVQYKLSTRSTSTRASRST FT DGTSDVASLGRQLLKECKQNQQMLSFLQQVQNAQEQRSPWPLQETPYLPGRENAKPGKT FT RPRKKPRAKQKPKKRRRYRSSSNSSSKSNDSSDAESSTCSSN" FT gene 344..721 FT /gene="ORF2" FT CDS 344..721 FT /codon_start=1 FT /gene="ORF2" FT /product="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/Swiss-Prot:Q914N2" FT /protein_id="AAL28135.1" FT /translation="MSWRPPAHNAEGQEGLWYRSVCQSHGAFCGCGDFVGHLNRLAERL FT GRPQPPRPPGGPPGPAIRVLPALPPAEGSPRRHNRTENQPCGGGDADFGDQRDAGDGGA FT AADDLSPADVEDLLDWLDAPE" FT gene 598..2757 FT /gene="ORF1" FT CDS 598..2757 FT /codon_start=1 FT /gene="ORF1" FT /product="ORF1" FT /db_xref="GOA:Q914N0" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/Swiss-Prot:Q914N0" FT /protein_id="AAL28134.1" FT /translation="MWWWRRRFWRPKRRWRWRRRRRRPLARRRRRPARLARRPRVRRRR FT FQWGRPRRYRPRRRRRRRKRQKIKLKQWNPAVTKFCRIIGYYPLIICGEGTTVRNYNVH FT SQDYVQYESYGGGMTTTMFNLKVPYEQFQLHQNFWTRSNIDLDLVRYHSVKFTFFRHPK FT VDFIVKFNRNPPFTDSVLTGPMLHPGVLMNSKRKILIPSWETRPRGKKRIPVRIGPPRL FT FTDHWYFQRDFCGVPLLTVNATACNLRYPFGSPQTKNICIYFLVLASIYNDKVSIAKDE FT VTKNYDTLVDAIKKSPQGLTVFNTFKTQEHMQEPSSETCKETQKTNPPFKYENLSSLWG FT DKIYKESTFNSFKTNAENLWKARSKHTLLGSKELNFKTGMYSAIFLTNGRLSPDYPGIY FT IEVVYNPLLGQGEGNMIWLEWCPKKTKQYNERQCYNLIQHVPLWAAIHGYMDFCKKTFK FT DNNLDKNTRVVLICPYTRPQLYNPQKPDWGYVPYDYNFAQTKMPDGNGYIPEFYRFRWY FT PSGFHQQNWMNDLDQCGPFSHRGEEKMATLTSKYNFKFTWGGNPIFQQTVKDPCKQSTF FT DIPGAGGIPRPIQIVNPKYLDPGITFHRWDLRRGFFGPAAVKRMQAESTDALFPTTGPK FT RPRTEVPVAVAGDALPSRERKRQAWQDSTSEETESEAEAQEEKTLQEQLQQQLKEQRQL FT RCGIQYMFQQLTKTQLHLHVPPIPQ" FT regulatory 2938..2943 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 3705 BP; 1071 A; 983 C; 868 G; 783 T; 0 other; aataacgtca ctaaccacgt gattccgctc cgccaatcag gtactggtac gtgcatttcc 60 tgggctgggc ttaccgctgc atataactag ctgcacttcc gaatggctga gttttccacg 120 cccgtccgca gcggtgaagc cacggacggg attcagcgcg tcccgagggc gggagccgaa 180 ggtgagttta cacaccgaag tctaggggca attcgggctc gggactggcc gggctatggg 240 caagtgtctt aaaaaagcat gtttttttgt ggcaggcact accgaaagaa gaggctactg 300 ccactgcgat acgtgccggg ttgcaccgaa aaaacctcct gctatgagct ggcgtcctcc 360 ggcacacaat gccgaaggac aggagggact ctggtacaga tctgtgtgtc agagtcatgg 420 tgctttttgt ggttgcggtg attttgtggg ccatcttaac cgccttgctg agcgtcttgg 480 aaggcctcaa cctcctagac cacctggcgg cccaccgggc cctgcaataa gggtgcttcc 540 tgcactacca ccggccgaag gcagtcctag aagacacaac agaaccgaga atcagccatg 600 tggtggtgga gacgcagatt ttggagacca aagagacgct ggagatggag gcgccgccgc 660 agacgacctc tcgcccgcag acgtcgaaga cctgctcgac tggctagacg ccccagagta 720 aggagacgcc gctttcagtg ggggaggccg cgtagatata gaccaagacg aaggcgcagg 780 agacgaaaga gacaaaaaat taagcttaaa cagtggaatc ccgcagtaac taaattctgc 840 agaattattg gatattaccc tttaataata tgcggtgaag gcaccactgt aagaaactac 900 aacgtacata gccaggacta tgtccaatat gaaagctatg gaggaggcat gaccaccact 960 atgtttaacc taaaagttcc gtacgaacag tttcaactgc accagaactt ctggacgcga 1020 tccaacatag acctagactt agtaagatac cacagtgtta aatttacctt ctttagacac 1080 cctaaagtag actttatagt aaagtttaac aggaaccctc cattcacaga ctctgtacta 1140 acaggtccta tgttacatcc cggggtgcta atgaacagca aaagaaaaat actaattcca 1200 agctgggaaa ctagaccccg aggtaaaaag agaatacctg taagaatagg accacctaga 1260 ctatttacag atcactggta ctttcaaaga gacttctgtg gtgtgcccct tctaactgtc 1320 aacgcaaccg catgcaactt gcggtatccg ttcggctcac cacaaacgaa aaacatttgc 1380 atatacttcc ttgttcttgc atcaatctat aacgacaaag tgagcattgc caaagatgaa 1440 gttacaaaaa attacgatac acttgttgac gccattaaaa agtccccaca aggtttaaca 1500 gtatttaaca catttaaaac acaagaacac atgcaagaac cgtcttcaga aacctgtaaa 1560 gaaactcaaa aaactaatcc accgtttaaa tatgaaaact tatcttcctt atggggagat 1620 aaaatttata aagaaagtac atttaatagc tttaaaacaa atgcagagaa cttatggaag 1680 gcaagaagta aacacacact gctaggttca aaggaactaa actttaaaac aggtatgtac 1740 tctgccatat ttttaacaaa cggtagacta agccctgact atcctggaat atatatagaa 1800 gtagtgtaca acccactact aggacaagga gaaggtaaca tgatatggct agagtggtgc 1860 ccaaaaaaaa ccaaacagta caatgaaagg cagtgctaca acctaataca acacgttcca 1920 ctatgggcag ccatacatgg ctacatggac ttttgcaaaa agacatttaa agacaataat 1980 ttagataaaa acaccagagt ggtactcatc tgcccttata ccagaccaca actatataac 2040 ccacagaaac cagactgggg atacgtacct tacgactata actttgctca aaccaaaatg 2100 ccagacggaa acgggtacat tcctgagttc tatagattta ggtggtaccc tagcggattc 2160 caccaacaaa actggatgaa tgacttggac cagtgcgggc ctttttcaca cagaggggaa 2220 gaaaaaatgg caacactaac ttctaaatac aactttaaat ttacctgggg tggtaatcct 2280 atatttcaac agactgtcaa agacccctgt aaacaatcca cctttgacat ccccggtgcc 2340 ggtggaatcc ctcgtccaat acaaattgtc aacccgaagt acctcgaccc gggcatcacg 2400 ttccaccgat gggacctcag acgtggcttc tttgggccgg cagctgttaa aagaatgcaa 2460 gcagaatcaa cagatgctct ctttcctaca acaggtccaa aacgcccaag aacagaggtc 2520 cccgtggccg ttgcaggaga cgccttacct tccagggaga gaaaacgcca agcctggcaa 2580 gactcgacct cggaagaaac cgagagcgaa gcagaagccc aagaagagaa gacgctacag 2640 gagcagctcc aacagcagct caaagagcaa cgacagctca gatgcggaat ccagtacatg 2700 ttccagcaat taacaaaaac gcagcttcac ctccacgtcc ctcctatccc tcaataagcc 2760 ccaaagcctt actgttccca gaacgcttac cacaaatgtg gacaaagcaa gactgggaaa 2820 cagaacagca agccgcggcg gtctgggaca gaccaatgcg caacaatctc accgaccctc 2880 ctttctatcc ctggatgccc cgctaccgcg taagcttacg tcttggtttc aacccacaat 2940 aaaaattcaa ggccgtggga gttccacttg tcggtgtctg cttcttaagg tcaccaagca 3000 ctccgagcgc cagcgaggag tgcgacccta ggtgggtact caacttcttc ggagccgcgc 3060 gctacgcctt cggctgcgcg cggcacctca gacccccgct cgtgctgaca cgcttgcgcg 3120 tgtcagacca cttcgggctc gcgggggtcg agaaatttgc taaacagact ccgagttgcc 3180 atttgacact ggagatgtga atcagtaacg aaagtgagtg gggccagact tcgccataag 3240 gcctttatct tcttgccatt tgtcagtgta gggggtcgcc ataggcttcg ggctccattt 3300 taggccttcc ggactaccaa aatggccgtc tcagtgacgt cacaggcgcc attttaagta 3360 agcatggcgg gcggcgacgt cacatgtcaa aggtcaccgc acttccgtgc ttgcacaaaa 3420 tggccgccaa ttacttccgg ggtcaaaggt tgctgctacg tcatcgagac acgtggtgcc 3480 agcagctgta aacccggaag tcgctgacac acgtgtcttg tcacgtgggt gctgcgtcac 3540 agccgccatt ttgttttaca aaatggccga cttccttcct cttttttaaa aattaaccgt 3600 cggcggcggc gcgcgcgctg cgcgcgcgcg ccgggggggt ccgccccccc ccgcgcatgc 3660 gcggggcccc cccccgcggg gggctccgcc ccccggcccc ccccg 3705 //