ID   AF434918; SV 1; linear; genomic RNA; STD; VRL; 717 BP.
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AC   AF434918;
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DT   06-DEC-2001 (Rel. 70, Created)
DT   06-DEC-2001 (Rel. 70, Last updated, Version 1)
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DE   Citrus variegation virus CVV1 RNA3 capsid gene, complete cds.
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KW   .
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OS   Citrus variegation virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
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RN   [1]
RP   1-717
RA   Bennani B., Mendes C., Zemzami M., Azeddoug H., Nolasco G.;
RT   "Citrus variegation virus: molecular variability of a portion of the RNA3
RT   containing the coat protein gene and design of primers for RT-PCR
RT   detection";
RL   Unpublished.
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RN   [2]
RP   1-717
RA   Bennani B., Nolasco G.;
RT   ;
RL   Submitted (17-OCT-2001) to the INSDC.
RL   FERN, Universidade do Algarve, Campus de Gambelas, Faro 8000-117, Portugal
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DR   MD5; 244d776da8abcf9a533f7f0be1b65731.
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FH   Key             Location/Qualifiers
FH
FT   source          1..717
FT                   /organism="Citrus variegation virus"
FT                   /isolate="CVV1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA: Florida"
FT                   /note="PV196; severe infectious variegation"
FT                   /db_xref="taxon:37127"
FT   CDS             64..717
FT                   /codon_start=1
FT                   /product="RNA3 capsid"
FT                   /note="coat protein"
FT                   /db_xref="GOA:Q8V324"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V324"
FT                   /protein_id="AAL37957.1"
FT                   /translation="MSGNAIEINGRWYQPAPNSAPTRGRGGRRQPTARSRQWAQGLANV
FT                   RRSQPQQLLVGSMPTNLPTWKSFPGEQWHEVSGYSFPDRWGSGTIAYMTLRSELSKIRT
FT                   LHDTTKVYSVMIGFVCKSDGYAGFMDGFDVNNATGPVAPDRIRVKRGKYCAKQHVFPTG
FT                   TTVSEVKANWNLVWDFDTAQATGAVHEISITKFYVSTTPLPGVKPPSNFLVVEE"
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SQ   Sequence 717 BP; 180 A; 173 C; 173 G; 191 T; 0 other;
     ggaggagatt tgtcttgaag tctccttctc cacttttacg tccctttctc ccataacaac        60
     aaaatgtctg gtaatgctat tgaaattaat ggtcgctggt atcaaccggc acccaatagt       120
     gccccgaccc gaggtcgtgg aggtcgccgt caacctactg cccgttctag gcaatgggct       180
     caaggactgg cgaacgttcg acggtcacaa ccacaacagt tgttggtcgg ttccatgcct       240
     actaacttac caacctggaa gtcattccca ggtgagcaat ggcatgaagt ttctgggtac       300
     agtttccctg atagatgggg ttctggtacc attgcctaca tgaccctacg ttcggagcta       360
     agtaaaataa gaacactcca tgataccacc aaagtgtatt cggtgatgat agggttcgta       420
     tgcaaatccg atggatatgc cgggtttatg gatggtttcg atgttaacaa tgccactgga       480
     cccgtcgctc ctgataggat ccgtgtgaag agggggaaat actgcgctaa acagcatgtt       540
     ttccctaccg gaaccacggt ttccgaagtg aaggccaatt ggaatttggt ctgggacttc       600
     gataccgccc aagcaactgg tgccgtgcat gaaatttcca taacgaaatt ttatgtttcc       660
     actacacctc ttcctggtgt gaagccacca agcaatttct tggttgttga agaatga          717
//