ID   AF434915; SV 1; linear; genomic RNA; STD; VRL; 716 BP.
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AC   AF434915;
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DT   06-DEC-2001 (Rel. 70, Created)
DT   06-DEC-2001 (Rel. 70, Last updated, Version 1)
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DE   Citrus variegation virus E1234 11 RNA3 capsid gene, complete cds.
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KW   .
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OS   Citrus variegation virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
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RN   [1]
RP   1-716
RA   Bennani B., Mendes C., Zemzami M., Azeddoug H., Nolasco G.;
RT   "Citrus variegation virus: molecular variability of a portion of the RNA3
RT   containing the coat protein gene and design of primers for RT-PCR
RT   detection";
RL   Unpublished.
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RN   [2]
RP   1-716
RA   Bennani B., Nolasco G.;
RT   ;
RL   Submitted (17-OCT-2001) to the INSDC.
RL   FERN, Universidade do Algarve, Campus de Gambelas, Faro 8000-117, Portugal
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DR   MD5; 25ebaca8b1b2d8dc244a130a864744d3.
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FH   Key             Location/Qualifiers
FH
FT   source          1..716
FT                   /organism="Citrus variegation virus"
FT                   /isolate="E1234"
FT                   /mol_type="genomic RNA"
FT                   /country="France: Corsica"
FT                   /clone="11"
FT                   /note="infectious variegation"
FT                   /db_xref="taxon:37127"
FT   CDS             63..716
FT                   /codon_start=1
FT                   /product="RNA3 capsid"
FT                   /note="coat protein"
FT                   /db_xref="GOA:Q8V327"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V327"
FT                   /protein_id="AAL37954.1"
FT                   /translation="MSGNAIEVNGRWYQPAPNSAPTRGRGGRRQPTARSRQWAQGLANV
FT                   RRSQPQQLLVGSMPTNLPTWKSFPGEQWHEVSGYSFPDRWGSGTIAYMTLRSELSKIRT
FT                   LHDTTKVYSVMIGFVCKSDGYAGFMDGFDINNATGPVAPDRIRVKRGKYCAKQQVFPTG
FT                   TTVSEVKANWNLVWDFDTAPATGAVHEISITKFYVSTTPLPGVKPPSNFLVVEE"
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SQ   Sequence 716 BP; 179 A; 176 C; 173 G; 188 T; 0 other;
     ggaggagatt tgtcttgaag tctccttctc cacttttacg tccctttctc ccataacaac        60
     aaatgtctgg taatgctatt gaagttaatg gtcgctggta tcaaccggca cccaatagtg       120
     ccccgacccg aggtcgtgga ggtcgccgtc aacctactgc ccgttccaga caatgggctc       180
     aaggactggc gaacgttcga cgatcacaac cacaacagtt gttggtcggt tccatgccta       240
     ctaacttacc aacctggaag tcattcccag gtgagcaatg gcatgaagtt tctgggtaca       300
     gtttccctga tagatggggt tctggtacca ttgcctacat gaccctacgt tcggagctaa       360
     gtaaaatacg aacgctccat gataccacca aggtgtattc ggtgatgata gggttcgtat       420
     gcaaatccga tggatatgcc ggatttatgg atggtttcga tattaataat gccactggac       480
     ccgtcgctcc tgataggatc cgtgtgaaga ggggaaaata ctgcgctaaa cagcaagttt       540
     tccctaccgg aaccacggtt tccgaagtga aggccaattg gaatctggtc tgggacttcg       600
     ataccgcccc agcaactggt gccgtgcatg aaatttccat aacgaaattt tatgtttcca       660
     ctacacctct tcctggggtg aagccgccaa gcaatttctt ggttgttgaa gaatga           716
//