ID   AF434914; SV 1; linear; genomic RNA; STD; VRL; 717 BP.
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AC   AF434914;
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DT   06-DEC-2001 (Rel. 70, Created)
DT   06-DEC-2001 (Rel. 70, Last updated, Version 1)
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DE   Citrus variegation virus E1234 13 RNA3 capsid gene, complete cds.
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KW   .
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OS   Citrus variegation virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
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RN   [1]
RP   1-717
RA   Bennani B., Mendes C., Zemzami M., Azeddoug H., Nolasco G.;
RT   "Citrus variegation virus: molecular variability of a portion of the RNA3
RT   containing the coat protein gene and design of primers for RT-PCR
RT   detection";
RL   Unpublished.
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RN   [2]
RP   1-717
RA   Bennani B., Nolasco G.;
RT   ;
RL   Submitted (17-OCT-2001) to the INSDC.
RL   FERN, Universidade do Algarve, Campus de Gambelas, Faro 8000-117, Portugal
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DR   MD5; 6227d7aaa5ebc60d0ba9bdbd572c56ad.
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FH   Key             Location/Qualifiers
FH
FT   source          1..717
FT                   /organism="Citrus variegation virus"
FT                   /isolate="E1234"
FT                   /mol_type="genomic RNA"
FT                   /country="France: Corsica"
FT                   /clone="13"
FT                   /note="infectious variegation"
FT                   /db_xref="taxon:37127"
FT   CDS             64..717
FT                   /codon_start=1
FT                   /product="RNA3 capsid"
FT                   /note="coat protein"
FT                   /db_xref="GOA:Q8V328"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:Q8V328"
FT                   /protein_id="AAL37953.1"
FT                   /translation="MSGNAIEINGRWYQPAPNNAPTRGRGGRRQPTARSRQWAQGLANV
FT                   RRSQPQQLLVGSMPTNLPTWKLFPGEQWHEVSGYSFPDRWGSGTIAYMTLRSELSKIRT
FT                   LHDTTKVYSVMIGFVCKSDGYAGFMDGFDVNNATGPVAPDRIRVKRGKYCAKQQVFPTG
FT                   TTVSEVKANWNLVWDFDTAPATGAVHEISITKFYVSTTPLPGVKPPSNFLVVEE"
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SQ   Sequence 717 BP; 183 A; 171 C; 170 G; 193 T; 0 other;
     ggaggagatt tgtcttgaag tctccttctc cacttttacg tccctttctc ccataacgac        60
     aaaatgtctg gtaatgctat tgaaattaat ggtcgctggt atcaaccggc acccaataat       120
     gccccgaccc gaggtcgtgg aggtcgccgt caacctactg ctcgttccag acaatgggct       180
     caaggactgg cgaacgttcg acgatcacaa ccacaacagt tgttggtcgg ttccatgcct       240
     actaacttac caacctggaa gttattccca ggtgagcaat ggcatgaagt ttctgggtac       300
     agtttccctg atagatgggg ttctggtacc attgcctaca tgaccctacg ttcggagcta       360
     agtaaaataa gaacgctcca tgataccact aaagtgtatt cagtgatgat agggttcgta       420
     tgcaaatccg atggatatgc cgggtttatg gatggtttcg acgttaataa tgccactgga       480
     cccgtcgctc ctgataggat ccgtgtgaag aggggaaaat actgcgctaa acagcaagtt       540
     ttccctaccg gaaccacggt ttccgaagtg aaggccaatt ggaatttggt ctgggacttc       600
     gataccgccc cagcaactgg tgccgtgcat gaaatttcta taacgaaatt ttatgtttcc       660
     actacacccc ttcctggtgt gaagccacca agtaatttct tggttgttga agaatga          717
//