Dbfetch

Dbfetch

ID   AF423177; SV 1; linear; genomic DNA; STD; VRL; 777 BP.
XX
AC   AF423177;
XX
DT   26-OCT-2001 (Rel. 69, Created)
DT   30-NOV-2002 (Rel. 73, Last updated, Version 2)
XX
DE   African cassava mosaic virus isolate ACMV-[Nam] coat protein (AV1) gene,
DE   complete cds.
XX
KW   .
XX
OS   African cassava mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-777
RX   DOI; 10.1016/S0168-1702(02)00051-5.
RX   PUBMED; 12076831.
RA   Maruthi M.N., Colvin J., Seal S., Gibson G., Cooper J.;
RT   "Co-adaptation between cassava mosaic geminiviruses and their local vector
RT   populations";
RL   Virus Res. 86(1-2):71-85(2002).
XX
RN   [2]
RP   1-777
RA   Maruthi M.N., Colvin J., Seal S.E.;
RT   "Vector transmission, symptom assessment and coat protein gene sequences of
RT   cassava mosaic geminivirus isolates";
RL   Unpublished.
XX
RN   [3]
RP   1-777
RA   Maruthi M.N., Colvin J., Seal S.E.;
RT   ;
RL   Submitted (25-SEP-2001) to the INSDC.
RL   Plant, Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB, UK
XX
DR   MD5; ea7e65b15617f64ea8a1a357289c4ad6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..777
FT                   /organism="African cassava mosaic virus"
FT                   /isolate="ACMV-[Nam]"
FT                   /mol_type="genomic DNA"
FT                   /country="Uganda: Namulonge"
FT                   /note="collected from the cassava mosaic disease pandemic
FT                   region in 1997"
FT                   /db_xref="taxon:10817"
FT   CDS             1..777
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q77FV0"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q77FV0"
FT                   /protein_id="AAL17831.1"
FT                   /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW
FT                   MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH
FT                   RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVIFYLLRDRRPYGNAPQDFGQIFNMFDN
FT                   EPSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE
FT                   NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN"
XX
SQ   Sequence 777 BP; 227 A; 151 C; 199 G; 200 T; 0 other;
     atgtcgaagc gaccaggaga tatcatcatt tccactccag gctccaaggt tcgtcgaaga        60
     ctgaacttcg acagcccata caggaaccgt gctactgccc ccactgtcca cgtcacaaat       120
     cgaaaacggg cctggatgaa caggcccatg tacagaaagc ccatgatgta caggatgtat       180
     agaagcccag acatacctag gggctgtgaa ggcccatgta aggtccagtc gtttgagcaa       240
     agggatgatg tgaagcacct tggtatctgt aaggtgatta gtgatgtgac gcgtgggcct       300
     gggctgacac acagggtcgg aaagaggttt tgtatcaagt ccatttacat tcttggtaag       360
     atctggatgg atgaaaatat taagaagcag aatcacacta ataatgtgat tttttacctg       420
     cttagggata gaaggcctta tggcaatgcg ccccaagact ttgggcagat atttaacatg       480
     tttgataatg agcccagtac tgcaacaatt aagaacgatt tgagggatag gtttcaggtg       540
     ttgaggaaat ttcatgccac tgttgttggt ggtccatctg gcatgaagga gcaggcgttg       600
     gtgaaaaggt tttataggtt gaatcatcac gtgacatata atcatcagga ggcagggaag       660
     tatgagaatc acacagagaa tgctttgctt ctgtacatgg catgtactca tgcctccaat       720
     cctgtatatg cgacgttgaa aatacgtata tacttctatg acagtattgg caattaa          777
//