ID AF418296; SV 1; linear; genomic RNA; STD; VRL; 3690 BP. XX AC AF418296; XX DT 15-NOV-2001 (Rel. 69, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Chum salmon reovirus CSV segment 3, complete sequence. XX KW . XX OS Chum salmon reovirus CS OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus. XX RN [1] RP 1-3690 RX PUBMED; 3819694. RA Winton J.R., Lannan C.N., Fryer J.L., Hedrick R.P., Meyers T.R., RA Plumb J.A., Yamamoto T.; RT "Morphological and biochemical properties of four members of a novel group RT of reoviruses isolated from aquatic animals"; RL J. Gen. Virol. 68(Pt 2):353-364(1987). XX RN [2] RP 1-3690 RA Rao S., Carner G.R., Chen W., Winton J.R.; RT "Complete genome sequence of the chum salmon virus"; RL Unpublished. XX RN [3] RP 1-3690 RA Rao S., Carner G.R., Chen W., Winton J.R.; RT ; RL Submitted (11-SEP-2001) to the INSDC. RL Entomology, Clemson University, Room 113, Long Hall, Box 340365, Clemson, RL SC 29634, USA XX DR MD5; fcab831637ead00d00f488ad93ad467d. XX FH Key Location/Qualifiers FH FT source 1..3690 FT /organism="Chum salmon reovirus CS" FT /segment="3" FT /mol_type="genomic RNA" FT /db_xref="taxon:173082" FT CDS 19..3651 FT /codon_start=1 FT /gene="VP3" FT /product="putative NTPase/RNA helicase" FT /db_xref="GOA:Q8VA41" FT /db_xref="InterPro:IPR013087" FT /db_xref="UniProtKB/Swiss-Prot:Q8VA41" FT /protein_id="AAL31498.1" FT /translation="MPRTSRNVRATEVATTAIPPSNAATDTTVDTTVAPTIASADAAQH FT ASNISSSQLGPAGVSDKVPSSVVTNDGDISVTPISENAAQLASSNQPASVIRNPVAAAT FT ISIVNPSSLRCQQCGAKFSSMTQLAEHVRTEHRTGAGSLVTSPAINQAIESWLLTWEDL FT RLLAPTIATDALNKYMGEAVAKAPLLIVEDEGLCTSFLASDTISIAGLQREIVGFTWFM FT ETLQMIPALPEGAVNHPICHTGWASKDSVSRHLDVRLSPPTHGGCFSIHYRTVEGIRQG FT HAIQPSYFPCQRPHAGPQVRSVQSQDQQVYSVDSGPDPRSRGRYVRFFDNKELFAVAYP FT GREVLMEANRNALFLDESLPDRVGCIGRAQNVSGDVSAHIDTYELCDDLTLAIREMYHN FT MLFSMHLDPASVMEIVQDVSQQLVAASIPFAQTDTILCPWAASTPTLQLSQVLNLLNVA FT NNTSAALPLIEAAATLIMGITPLRMEPRILSEAIKRVPETTTIVPSPTGELTRLLKPLG FT NDYSAIYRCIAGCLYSGLVQMFISADAYPDPTQSITSIPAIWKSLIVMLAAPMTTDPHA FT AVKAFMSMANLLAQPEPIIIPAPGMTQSTPAVQFSHPEVWPPGFVDPTTLDRNRTPLLH FT ALATMIHAHWPQPGVIQYGRSRLGSANLFLPANQLTYPWPTQPLPRITVGPTYDSAMFR FT WIDSVFGFYINVVNSRYVATIVGDTTRRTLTGLMAALMQVKTMTPFYIERMCPTEVAVV FT GGVTVFPPFQVPITRLDPTQVITNVMVSPRGPPAPCRRSRRSHRYYAYAAPIPCQSIPL FT RLSLLCCVRQTEATLGPSYHYGSAITPMFLSEELFTRNQRAVIASEAFVCARSIIAQCV FT PDGFQVPRPLQDFNQYNASGSTAADLLKAVDDMFKTAFDIDGSLIEGIGLYGDPRVADL FT SVAYLRQNGAVERVHTAPDSSFLHEAMQVTSQVMVNEPNLWAIARGDIILAQNATHNNW FT DPLNPVGLPIFARGGPNVHVVGSRGMIIPQPGGLAPMIRDDAGNPQQIEGDWIYPISVL FT QVSVANFRDHVWPMIQAGRTRVRIEMGHFLYSIHYHEPFGQITEAPAIDTWLAGISPTG FT IPPFPLSAPIPQITIPITARRVYFGYCTMNNTGATFSTLGAAIQSAWGTDVTIQRNRWP FT ALIDPNYIPGQSQLPARVQLYNPLRRYNYRYPSLKGMLYIPGVE" XX SQ Sequence 3690 BP; 750 A; 1222 C; 846 G; 872 T; 0 other; gttttatcat cacgcatcat gccacgcacc tcgcgcaacg tacgcgccac cgaggttgcc 60 actactgcca taccacctag caatgccgct actgacacta ccgttgatac taccgtcgct 120 ccaaccatcg ctagtgcaga cgccgcccaa catgcatcca acatctcgtc ttcacaactt 180 ggacccgctg gagtttcaga taaggttcct tcctccgtcg tgaccaatga tggtgacatt 240 tcagtgaccc ccatctccga gaacgccgcg caactagcat catccaacca acccgcgtca 300 gtcatccgta accctgtcgc cgctgccacc atttccattg tcaatccctc atccctacga 360 tgccaacaat gcggtgccaa gttctcgtcg atgacccaac tggccgaaca cgtgcggacc 420 gagcatcgaa ctggcgcggg ctccctggtg acatctcctg cgattaatca agctatcgaa 480 tcttggctgc tcacttggga agatcttcgt cttctagcgc ctaccatcgc cactgacgcc 540 ttaaacaagt acatgggaga ggctgtagcc aaggcaccat tattaattgt cgaggatgag 600 ggtctttgca cttcatttct tgcttctgac actatctcaa ttgctgggct gcaacgagag 660 attgtcggat tcacctggtt catggagacc ttgcagatga tcccagcgct gcctgaggga 720 gccgttaatc atccgatctg tcacaccggt tgggcgagca aggattcagt gtcgcgccac 780 ttggacgtcc gtctttctcc tcccactcat gggggctgtt tcagcataca ctaccgtact 840 gtcgaaggga tacgtcaagg acatgcaatt caaccctcat actttccgtg ccaacgccct 900 catgctggtc ctcaagttcg ttctgtccaa tctcaagatc aacaagtcta ctccgtggac 960 tcaggaccag acccccgatc ccgtggtcga tacgtccgat tctttgacaa caaggagttg 1020 tttgctgtcg cctaccctgg tcgtgaagtg ctgatggagg ctaaccgcaa cgcgcttttc 1080 ctggatgaat cactccccga ccgcgtcggt tgtatcggca gggcccagaa tgtgtctggt 1140 gacgtgagcg cgcacatcga tacttacgag ctgtgcgacg atctaaccct cgccattcgt 1200 gaaatgtatc acaatatgct tttcagcatg cacttggatc ctgcatccgt catggagatc 1260 gtgcaagacg tgtctcaaca gttggtcgcc gcatccatcc ccttcgctca gactgacacc 1320 atcctgtgcc catgggctgc gtccaccccg acccttcaac tcagtcaggt cctcaaccta 1380 ctcaacgtgg ccaacaatac ctcagccgcc ctcccactca tcgaggccgc agccactctc 1440 attatgggca tcaccccact ccgaatggaa ccgcgaatcc tgtctgaagc catcaagcgt 1500 gtgccggaaa cgacgacgat cgtcccctca cccaccggcg agctcacccg cctcctcaag 1560 ccgcttggca atgattactc ggctatctat cgatgcatcg ctggctgtct gtacagtggt 1620 cttgtccaga tgttcatctc cgcagatgct taccctgatc ctacccagtc catcacaagt 1680 atccctgcca tttggaaatc ccttatcgtc atgctggccg cgcctatgac cactgatcct 1740 cacgctgctg tgaaggcgtt catgtcgatg gccaacctac tcgctcagcc cgagcccatc 1800 atcatccccg cgccgggcat gacgcagtcc actccagccg tacagttcag ccaccccgag 1860 gtctggcctc ctgggttcgt tgatccgacc accctcgatc gcaatcgcac ccccctgctc 1920 cacgcgctgg cgactatgat ccatgcacac tggccccaac ccggcgtgat ccagtatggc 1980 aggtcacgtc tgggttcagc gaatctcttc ctgcccgcca accaactcac ctacccctgg 2040 ccgactcaac ccttacctcg catcaccgtc ggtcctacct acgactcggc catgttcaga 2100 tggattgaca gcgtttttgg tttttacatc aacgtagtca actcccgtta cgtggcaacc 2160 atcgtcgggg ataccacacg ccgcaccttg acgggtttga tggccgcact catgcaggtt 2220 aagaccatga cccctttcta cattgagagg atgtgtccga ccgaggtggc cgttgttggg 2280 ggtgtgaccg tctttcctcc gttccaagtc cctatcactc ggttagatcc tacccaggtg 2340 atcactaacg tgatggtatc cccgcgtgga cccccagctc cgtgccgacg tagccgtcga 2400 tcccatcgtt actatgccta cgctgcgcca attccctgcc agtcgatccc gctgcgattg 2460 tcgttgctat gttgtgtgcg ccaaactgaa gcgactctcg gtccgtctta tcactacggt 2520 tccgcgatca ctcccatgtt cctgtccgaa gaattattca ctcgcaacca aagagcggtg 2580 atcgccagcg aggccttcgt ctgcgccagg tctatcatag cccagtgcgt gccagatgga 2640 ttccaagtcc caagaccttt acaagacttc aatcagtaca atgcttcagg cagcactgca 2700 gccgacctcc tcaaggccgt tgacgacatg ttcaagactg cttttgacat tgatggttcc 2760 cttatcgagg gcattggctt gtacggcgat ccgcgcgtgg ccgatctctc tgttgcctac 2820 ctccgtcaga atggcgcggt cgagcgtgtc catactgccc cagattcctc attcctccac 2880 gaagctatgc aggtcacgtc tcaggtcatg gtaaacgaac ccaatctgtg ggccattgct 2940 cgtggggaca tcattcttgc tcaaaacgcc actcacaaca actgggatcc actgaacccc 3000 gtcggcctac ccatcttcgc tcgtgggggt cccaacgtac atgtggttgg ctcgcgtggc 3060 atgatcatcc cgcaacccgg tggcttggcc cccatgattc gagacgacgc tggcaatccc 3120 cagcagatcg agggtgactg gatctacccc atcagtgtgc ttcaggtgtc agtagctaat 3180 ttcagggacc atgtctggcc gatgattcaa gctggacgga cgcgtgtccg tattgagatg 3240 ggccacttcc tgtactccat tcactaccat gagcctttcg gtcagattac tgaagctccc 3300 gcgattgaca cctggctcgc tggcatctcc ccaactggca tcccaccttt cccattgagt 3360 gccccaattc cccaaatcac catcccgatc accgcccgcc gtgtgtactt cggatactgc 3420 accatgaaca acaccggtgc cacgttttcc actctcggtg cagccattca gtcggcttgg 3480 ggaactgacg tcaccatcca gcgaaatcga tggccggccc tcatcgaccc caactacatc 3540 cctggccagt cccaacttcc cgctcgtgtc cagctttaca atccactgcg ccgctataac 3600 tatcgttacc catctctgaa gggcatgctg tacatccccg gtgttgagta ggcgtacgtg 3660 tcgcccgcct ggctagtggt gattttcatc 3690 //