ID AF417243; SV 1; linear; genomic RNA; STD; VRL; 6424 BP. XX AC AF417243; XX DT 04-APR-2002 (Rel. 71, Created) DT 04-APR-2012 (Rel. 112, Last updated, Version 2) XX DE Cucumber green mottle mosaic virus isolate KOM, complete genome. XX KW . XX OS Cucumber green mottle mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6424 RA Kim S.M., Yim K.O., Kim K.H.; RT "Characterization of CGMMV isolated from oriental melon in Korea"; RL Unpublished. XX RN [2] RP 1-6424 RA Kim S.M., Yim K.O., Kim K.H.; RT ; RL Submitted (06-SEP-2001) to the INSDC. RL Agricultural Biotechnology, Seoul National University, 103 Kwonsun-Gu, RL Suwon 441-744, Korea XX DR MD5; 717680d7852057654842415e30633d14. DR EuropePMC; PMC4424317; 25953166. DR EuropePMC; PMC4677753; 26674677. DR RFAM; RF01072; TMV_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..6424 FT /organism="Cucumber green mottle mosaic virus" FT /host="oriental melon" FT /isolate="KOM" FT /mol_type="genomic RNA" FT /db_xref="taxon:12235" FT CDS 61..5007 FT /codon_start=1 FT /transl_except=(pos:3493..3495,aa:OTHER) FT /product="RNA replicase" FT /note="186K protein readthrough product" FT /db_xref="GOA:Q8QTI9" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q8QTI9" FT /protein_id="AAM02966.1" FT /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSGGCRPLPT FT FQIDAFRRYDSSPCAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADAKIERESVSELLASGDDLFKKIDEIRNNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSSTSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAVLPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWSGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTKXQLMQNSLYVHRNIFLPVSKTG FT FYTDMQEFYDRCLPGNSFVLNDFDAVTMRLRDNEFNLQPCRLTLSKLDPVPALIKNEAQ FT NFLIPVLRTACEKPRIPGLLENLVAMIKRNMNTPDLAGTVDITNMSISIVDNFFSSFVR FT DEVLLDHLDCVRASSIQSFSDWFSCQPTSAVGQLANFNFIDLPAFDTYMHMIKRQPKSR FT LDTSIQSEYPALQTIVYHPKVVNAVFGPVFKYLTTKFLSMVDSSKFFFYTRKKPEDLQE FT FFSDLSSHSDYEILELDVSKYDKSQSDFHFSIEMAIWEKLGLDDILAWMWSMGHKRTIL FT QDFQAGIKTLIYYQRKSGDVTTFIGNTFIIAACVASMLPLDKCFKASFCGDDSLIYLPK FT GLEYPDIQATANLVWNFEAKLFRKKYGYFCGKYIIHHANGCIVYPDPLKLISKLGNKSL FT VGYEHVEEFRISLLDVAHSLFNGAYFHLLDDAIHELFPNAGGCSFVINCLCKYLSDKRL FT FRSLYIDVSK" FT CDS 61..3495 FT /codon_start=1 FT /product="RNA replicase" FT /note="129K protein" FT /db_xref="GOA:Q8QTJ0" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q8QTJ0" FT /protein_id="AAM02965.1" FT /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSGGCRPLPT FT FQIDAFRRYDSSPCAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADAKIERESVSELLASGDDLFKKIDEIRNNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSSTSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAVLPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWSGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTK" FT CDS 4994..5788 FT /codon_start=1 FT /product="movement protein" FT /note="29K protein" FT /db_xref="GOA:Q9WMZ9" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q9WMZ9" FT /protein_id="AAM02967.1" FT /translation="MSLSKVSVENSLKPEKFVKISWVDKLLPNYFSILKYLSITDFSVV FT KAQSYESLVPVKLLRGVDLTKHLYVTLLGVVVSGVWNVPESCRGGATVALVDTRMHSVA FT EGTICKFSAPATVREFSVRFIPNYSVVAADALRDPWSLFVRLSNVGIKDGFHPLTLEVA FT CLVATTNSIIKKGLRASVVESVVSSDQSIVLDSLSEKVEPFFDKVPISAAVMARDPSYR FT SRSQSVGGRGKRHSKPPNRRLDSASEESSSVSFEDGLQSDHT" FT CDS 5763..6248 FT /codon_start=1 FT /product="coat protein" FT /note="17.4K protein" FT /db_xref="GOA:Q77G05" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q77G05" FT /protein_id="AAM02968.1" FT /translation="MAYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDSF FT RESLSALPSSVVDINSRFPDAGFYAFLNGPVLRPIFVSLLSSTDTRNRVIEVVDPSNPT FT TAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASFEAAFSVVWSEATTSKA" XX SQ Sequence 6424 BP; 1649 A; 1241 C; 1532 G; 2002 T; 0 other; gttttaattt ttataattaa acaaacaaca acaacaacaa caaacaattt taaaacaaca 60 atggcaaaca ttaatgaaca aatcaacaac caacgtgacg ccgcggctag cgggagaaac 120 aatctcgtta gccaattggc gtcaaaaagg gtgtatgacg aggctgttcg ctcgttggat 180 catcaagaca gacgcccgaa aatgaacttt tctcgtgtgg tcagcacaga gcacaccagg 240 cttgtaactg atgcgtatcc ggagttttcg attagcttta ccgccaccaa gaactctgta 300 cactccctcg cggggggtct gaggcttctt gaattggaat atatgatgat gcaagtgccc 360 tacggctcac cttgttatga catcggcggt aactatacgc agcacttgtt caaaggtaga 420 tcatatgtgc attgctgcaa tccgtgccta gatcttaaag atgttgcgag gaatgtgatg 480 tacaacgata tgatcacgca acatgtacag aggcacaagg gatctggcgg gtgcagacct 540 cttccaactt tccagataga tgcattcagg aggtacgata gttctccctg tgcggtcacc 600 tgttcagacg tttttcaaga gtgttcctat gattttggga gtggtaggga taatcatgca 660 gtctcgttgc attcaatcta cgatatccct tattcttcga tcggacctgc tcttcatagg 720 aagaatgtgc gagtttgtta tgcagccttt cacttctcgg aggcattgct tttaggttcg 780 cctgtaggta atctaaatag tattggggct cagtttaggg tcgatggtga tgatgtgcat 840 tttcttttta gtgaagagtc tactttgcat tatactcata gtttagaaaa tatcaagtta 900 atcgtaatgc gtacttactt tcctgctgat gataggtttg tatatattaa ggagttcatg 960 gttaagcgtg tggatacttt tttctttagg ttggtcagag cagatacaca catgcttcat 1020 aaatctgtgg ggcactattc gaaatcgaag tctgagtact tcgcgctgaa tacccctccg 1080 atcttccaag ataaagccac gttttctgta tggtttcctg aagcgaagcg caaggtgttg 1140 atacccaagt ttgaactttc gagattcctt tctgggaatg tgaaaatctc taggatgctt 1200 gtcgatgctg atttcgtcca taccattatt aatcacatta gcacgtatga taacaaggcc 1260 ttagtgtgga agaatgttca gtcctttgtg gaatccatac gttcaagagt aattgtaaac 1320 ggagtttccg tgaaatctga gtggaacgta ccggttgatc agctcactga tatctcgttc 1380 tcgatattcc ttctcgtgaa ggttaggaag gtacagatcg agttaatgtc tgataaagtt 1440 gtgatcgagg cgaggggttt gcttcggagg ttcgcagaca gtcttaaatc tgccgtagaa 1500 ggactaggtg attgcgtcta tgatgctcta gttcaaaccg gctggtttga cacctctagc 1560 gacgaactga aagtattgct acctgaaccg tttatgacct tttcggatta tcttgaaggg 1620 atgtacgagg cagatgcaaa gatcgagaga gagagtgtct ctgagttgct cgcttccggt 1680 gatgatttgt tcaagaaaat cgatgagata agaaacaatt acagtggagt cgaatttgat 1740 gtagagaaat tccaagaatt ttgcaaggaa ctgaatgtta atcctatgct aattggccat 1800 gttatcgaag ctattttttc gcagaaggct ggggtaacag taacgggtct gggcacgctc 1860 tctcctgaga tgggtgcttc tgttgcgtta tccagtacct ctgtagatac atgtgaagat 1920 atggatgtaa ctgaagatat ggaggatata gtgttgatgg cggacaagag tcattcttac 1980 atgtcccctg aaatggcgag atgggctgat gttaaatatg gcaacaataa aggggctcta 2040 gtcgagtaca aagtcggaac ctcgatgact ttacctgcca cctgggcaga gaaaggtaag 2100 gctgtcttac cgttgtcggg gatctgtgtg aggaaacccc aattttcgaa gccgcttgat 2160 gaggaagatg acttgaggtt atcaaacatg aatttcttta aggtgagcga tctaaagttg 2220 aagaagacta tcactccagt cgtttacact gggaccattc gagagaggca aatgaagaat 2280 tatattgatt acttatcggc ctctcttggt tccacgctgg gtaatctgga gagaatcgtg 2340 cggagtgatt ggagtggtac tgaggagagt atgcaaacgt tcgggttgta tgattgcgaa 2400 aagtgcaagt ggttattgtt accagctgag aagaagcacg catgggccgt ggttctggca 2460 agtgatgata ccactcgcat aatcttcctt tcatatgacg aatctggttc tcctataatt 2520 gataagaaaa actggaagcg attcgctgtc tgttccgaga ccaaagtcta tagtgtaatt 2580 cgtagtttag aggttttaaa taaggaagcg atagtcgacc ccggggttca cataacatta 2640 gttgacggag tgccgggttg tggaaagacc gccgagatta tagcgagggt caattggaaa 2700 actgatctag tattgactcc cgggagggag gcggctgcta tgattaggcg gagagcctgc 2760 gccctgcaca agtcacctgt ggcaaccagt gacaacgtta gaactttcga ttcttttgtg 2820 atgaatagga aaatctttaa gtttgacgct gtctatgttg acgagggtct gatggtccat 2880 acgggattac ttaattttgc gttaaagatc tcaggttgta aaaaagcctt cgtctttggt 2940 gatgctaagc aaatcccgtt tataaacaga gtcatgaatt ttgattatcc taaggagtta 3000 agaactttaa tagtcgataa tgtagagcgt aggtatgtca cccataggtg tcctagagat 3060 gtcactagtt ttcttaatac tatctataaa gccgctgtcg ctactactag tccggttgta 3120 cattctgtga aggcaattaa agtgtcaggg gccggtattc tgaggcctga gttgacaaag 3180 atcaaaggaa agataataac gtttactcaa tctgataagc agtccttgat caagagtggg 3240 tacaatgatg tgaatactgt gcatgaaatt cagggagaaa cctttgagga gacggcggtt 3300 gtacgtgcca ccccgactcc aataggtttg attgcccgtg attcaccaca tgtactagtg 3360 gccttaacta ggcacactaa ggcaatggtg tattatactg ttgtattcga tgcagttaca 3420 agtataatag cggatgtgga aaaggtcgat cagtcgatct tgaccatgtt tgctaccact 3480 gtgcctacca aatagcaatt aatgcagaat tcgctgtatg tccatcgtaa tattttcctc 3540 cctgttagta aaacggggtt ttatacagac atgcaggagt tctacgatag atgccttcct 3600 gggaattcct tcgtactgaa tgatttcgat gccgtaacca tgcggttgag ggacaacgaa 3660 tttaacttac aaccttgtag gctaaccttg agtaaattag atccggtacc cgctttgatt 3720 aagaatgaag cgcagaattt tctgatcccc gttttgcgta cggcctgtga aaagccgcgc 3780 attccgggtc ttcttgagaa tcttgtagct atgataaaga ggaatatgaa tactcctgat 3840 ttagctggga ccgtagatat aactaacatg tcgatttcta tagtagataa cttcttttct 3900 tcttttgtta gggacgaggt tttgcttgat cacttagatt gtgttagggc tagttccatt 3960 caaagttttt ctgattggtt ttcgtgtcag ccaacctcag cggttggcca gttggctaat 4020 ttcaatttca tagatttgcc tgcctttgat acttatatgc atatgattaa gaggcaaccc 4080 aagagtcggt tagatacttc gattcagtct gaatatccgg ccttgcaaac tattgtttat 4140 caccctaaag tggtaaatgc agtttttggt ccggttttca agtatttgac cactaagttt 4200 cttagtatgg tagatagttc taagtttttc ttttacacta ggaaaaaacc agaagatctg 4260 caggaatttt tctcagatct ctcttcccat tctgattatg agattcttga gcttgatgtt 4320 tctaaatatg acaagtcgca atccgatttc catttctcta ttgagatggc aatttgggaa 4380 aaattggggc tggacgatat tttggcttgg atgtggtcta tgggtcacaa aagaactata 4440 ctgcaagatt tccaagccgg gataaagacg ctcatttact atcaacggaa gtctggtgat 4500 gtaactactt ttataggtaa cacctttatt atcgcagcgt gtgtagctag tatgttgccg 4560 ttagataagt gttttaaagc tagtttttgt ggtgatgatt cgctgatcta ccttcctaag 4620 ggcttggagt atcctgatat acaggctact gccaaccttg tttggaattt tgaggcgaaa 4680 cttttccgaa agaagtatgg ttacttctgc gggaagtata taattcacca tgccaacggc 4740 tgtattgttt accctgaccc tttaaaatta attagtaaat taggtaataa gagtcttgta 4800 gggtatgagc atgttgagga gtttcgtata tccctcctcg acgttgctca tagtttgttt 4860 aatggtgctt atttccatct actcgacgat gcaatccacg aattatttcc taatgctggg 4920 ggttgcagtt ttgtaattaa ttgtttgtgt aagtatttga gtgataagcg ccttttccgt 4980 agtctttaca tagatgtctc taagtaaggt gtcagtcgag aactcgttga aacctgagaa 5040 gtttgtcaaa atctcttggg tcgataagtt gctccctaac tatttttcca ttcttaagta 5100 tttatctata actgacttta gtgtagtcaa agctcagagc tatgaatccc tcgtgcctgt 5160 caagttgttg cgtggtgttg atcttacaaa acacctttat gtcacattgt tgggcgttgt 5220 ggtttctggt gtatggaacg taccggaatc ctgtaggggt ggtgctactg ttgctctggt 5280 tgacacaagg atgcattctg ttgcagaggg aactatatgc aaattttcag ctcccgccac 5340 cgtccgcgaa ttctctgtta ggttcatacc taattattct gtcgtggctg cggatgccct 5400 tcgcgatcct tggtctttat ttgtgagact gtctaatgtg ggtattaaag atggtttcca 5460 tcctttgact ttagaggtcg cttgtttagt cgctacaact aactctatta tcaaaaaggg 5520 tcttagagct tctgtagtcg agtctgtcgt ctcttccgat cagtctattg tcctagattc 5580 tttatccgag aaagttgaac ctttctttga caaagttcct atttcagcgg ctgtaatggc 5640 aagagatccc agttataggt ctaggtcgca gtctgtcggt ggtcgtggta agcggcattc 5700 taaacctcca aatcggaggt tggactctgc ttctgaagag tccagttctg tttcttttga 5760 agatggctta caatccgatc acacctagca aacttattgc gtttagtgct tcttatgttc 5820 ccgtcaggac tttacttaat tttctagttg cttcacaagg taccgctttc cagactcaag 5880 cgggaagaga ttctttccgc gagtccctgt ctgcgttacc ctcctctgtc gtagatatta 5940 attctagatt cccagatgcg ggtttttacg ctttcctcaa cggtcctgtg ttgaggccta 6000 tcttcgtttc gcttctcagc tccacggata cgcgtaatag ggtcattgag gttgtagatc 6060 ctagcaatcc tacgactgct gagtcgctta acgctgtaaa gcgtactgat gacgcgtcta 6120 cagccgctag ggctgagata gataatttaa tagagtctat ttctaagggt tttgatgttt 6180 acgatagggc ttcatttgaa gccgcgtttt cggtagtctg gtcagaggct accacctcga 6240 aagcttagtt tcgagggtct tctggcggtg gtgcacacca aagtgcatag tgctttcccg 6300 ttcacttaaa tcgaacggtt tgctcattgg tttgcggaaa cctctcacgt gtgacgttga 6360 agtttctatg ggcagtaatt ctgcaagggg ttcgaatccc cccctttccc cgggtagggg 6420 ccca 6424 //