ID AF414372; SV 2; linear; genomic RNA; STD; VRL; 7383 BP. XX AC AF414372; XX DT 29-JAN-2002 (Rel. 70, Created) DT 09-JAN-2022 (Rel. 144, Last updated, Version 6) XX DE Enterovirus J108 strain N125, complete genome. XX KW . XX OS enterovirus J108 OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; OC Picornavirales; Picornaviridae; Enterovirus; Enterovirus J. XX RN [1] RP 1-7383 RX PUBMED; 11773400. RA Oberste M.S., Maher K., Pallansch M.A.; RT "Molecular phylogeny and proposed classification of the simian RT picornaviruses"; RL J. Virol. 76(3):1244-1251(2002). XX RN [2] RP 1-7383 RX PUBMED; 18024906. RA Oberste M.S., Maher K., Pallansch M.A.; RT "Complete genome sequences for nine simian enteroviruses"; RL J. Gen. Virol. 88(PT 12):3360-3372(2007). XX RN [3] RP 1-7383 RA Oberste M.S., Maher K., Pallansch M.A.; RT ; RL Submitted (27-AUG-2001) to the INSDC. RL Respiratory and Enteric Virus Branch, Centers for Disease Control and RL Prevention, 1600 Clifton Rd. NE, Mailstop G-17, Atlanta, GA 30333, USA XX RN [4] RC Sequence update by submitter RP 1-7383 RA Oberste M.S., Maher K., Pallansch M.A.; RT ; RL Submitted (27-FEB-2007) to the INSDC. RL Respiratory and Enteric Virus Branch, Centers for Disease Control and RL Prevention, 1600 Clifton Rd. NE, Mailstop G-17, Atlanta, GA 30333, USA XX DR MD5; 34382894c3a6409c877d4b4004754367. DR EuropePMC; PMC135860; 11773400. DR RFAM; RF00041; Entero_OriR. DR RFAM; RF00048; Entero_CRE. DR RFAM; RF00229; IRES_Picorna. DR RFAM; RF00386; Entero_5_CRE. XX CC On Feb 25, 2008 this sequence version replaced AF414372.1. XX FH Key Location/Qualifiers FH FT source 1..7383 FT /organism="enterovirus J108" FT /strain="N125" FT /isolate="Simian picornavirus strain N125" FT /mol_type="genomic RNA" FT /db_xref="taxon:2849125" FT 5'UTR 1..737 FT CDS 738..7277 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q8V398" FT /db_xref="InterPro:IPR000081" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR002527" FT /db_xref="InterPro:IPR003138" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR014838" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="InterPro:IPR036203" FT /db_xref="UniProtKB/TrEMBL:Q8V398" FT /protein_id="AAL68560.2" FT /translation="MGAQISTQKSGSHETGTYATGGSTINYTNINYYKDSYAASASRQD FT FSQDPAKFTKPVVDALTEAAVPLKSPSAEACGYSDRVLQLTLGNSTITTQEAANIVVGY FT GKWPEHLKPIDANSIDAPTKPDVAVNRFYTLKAKKWEKNSSGWMWKLPDCLNDTGVFGQ FT NCWYHFLYRGGWAVHVQCNASKFHQGALLVFLAPDFTRGAPTTTTTGTIPNVSYSDTMP FT GEDGTTFRNPLFLDNGTMLQQATVFPHQWINLRTNNSATIIVPYINNIPADSPVRHNNW FT TLCVVPVVPLDYSDGATTVVPVTVTLAPMCCEFDGLRNAVSQGLPVKATPGSYQFLTTS FT DDCSEGLLPNFHSTPEIFIPGQVNNLLELVQIETMMTINNVAAQSAGVERISIPVSVQS FT DVDAQIAAFAVNPGGDGVFQSTYLGQICRYFNNWSGSIEITFMFCGSFMATGKILIAYT FT PPGGSAPTDRKSAMLGTHIIWDFGLQSSATLVIPWISNTCMRNVASLAYQDTYFAGGFV FT TMWYQTNFVVPAGAPTTARIIALCAAKGDFCLRLLKDSTDITQSAVLQNSPEAAIEGII FT NATVHNITPQNISSTEGSIGSAAPALQAAETGATSTATPEGMIETRSVINRQHIAESSV FT ESFYSRAGLVGIVQLQGTQSSTFTTWVIDTMGFVQQRRKLELFTYMRFDAEFTMLVCAD FT EEINPYNIQYMYVPPGSGVPSDHDSYLWQSGTNPSIYVKSTDPPAQFSIPFMSTCAAYA FT WFYDGYPRAYGNDAAQLNKSYGMLPANQFGTFCMRLLGSALKTNLTVRIYMRPKHVKCW FT APRPFRMLPYVEKNRPSYHTPPVDPIKNRTNITTTGAFGQQSGSVYVGNYKITNLHLAN FT EFDKDNQVWSCYERDLIVSTTTAHGCDTIARCNCNTGVYFCKSTNKHYPVSFQGPGLTF FT IEANEYYPARYQSHVLLAVGHAQPGDCGGILRCEHGVIGIVTAGGEGLVAFADLRDLLW FT LEDDAMEQGVSDYVQRLGSAFGAGFTNEIAEKTQHIKEMLIGQDSVLEKCLKALIKIVS FT AMVILIRNHEDLITVTATLALIGCSASPWQWLKSKVCSYFQIPMVQKQADGWMKKFTEA FT TNAAKGLEWLANKISKFIDWVKSKIVPQVKEKLEFLSKLKQLPLLESQIATIEHSAPSQ FT EAQETLHGNVQYLAHYCRKFAPLYAAEAKRVYHLEKRMNNYMRFKTKSRIEPVCLLIHG FT SPGAGKSVVSSLVGRAIAEKMNSSVYSLPPDPDHFDGYKQQAVVIMDDLCQNPDGKDVS FT LLCQMVSTVDFIPPMASLEEKGILYTSPFMIASTNHGSISAPTISDSRALARRFFLDVD FT IFIHDEYKTETGKLNMPAACMHCNSCDPANFKRCCPIICGKALMFSDRRTSVRYTTDML FT VSEMFREYSHRNSIGNVLEALFQGPPVYKELKISVAEEVPPPPAIADLLKSVDSEEVRH FT YCESKGWIIPATETNVERHINRAMTILQAVSTFVAVAGCVFVVYKLFAGFQGAYTGLPF FT TKPKVPTIRQAKVQGPNFEFAVAMMKRNSCIAKTGQGEFTMLGIWDKWAVLPRHAKPGD FT SIIVDDKEVPVEDAKELVDSEGVNLELTLIKLRRNEKFRDIRGFLPNEPGEIGDAVLAI FT NTSRFPNMFIPVGKVTEYGFLNLSGTPTHRVLMYNFPTKSGQCGGVLMATGKVLGIHVG FT GNGHQGFAATLLRSYFNEEQGQIEWIETNKESGYPIINAPTKTKLEPSVFHDIFEGKKE FT PAVLNPRDPRLKTDFEEAIFSKYVGNVNAHVDEYMKEAVDHYAGQLLTLDINIEPLCLE FT DAVYGTDGLEALDLTTSAGYPYVTLGIKKRDILSKKTRDLSKLRECMDKYGLNLPMVTY FT VKDELRSREKVEQGKSRLIEASSLNDSVAMRQTFGNLYRTFHNNPGVMTGSAVGCNPDT FT FWSKIPVMLDGELFAFDYTGYDASLSPVWFAALKLVLEKLGYTSDETKYIDYLCNSYHL FT YKNKHYFVRGGMPSGCSGTSIFNSMINNIIIRTLLLKTYKNIDLDKFRMIAYGDDVIAS FT YPYPIDAGLLAKAGKEYGLTMTPADKSATFNDVTWENVTFLKRYFRADEQFNFLVHPVM FT PMKEIHESIRWTKDAKNTQEHVRSLCELAWHNGEEAYNEFLNKIRSVPVGRCLLLPAYS FT TLRRKWLDSF" FT mat_peptide 738..944 FT /product="1A (VP4)" FT mat_peptide 945..1706 FT /product="1B (VP2)" FT mat_peptide 1707..2432 FT /product="1C (VP3)" FT mat_peptide 2433..3278 FT /product="1D (VP1)" FT mat_peptide 3279..3728 FT /product="2A" FT mat_peptide 3729..4025 FT /product="2B" FT mat_peptide 4026..5012 FT /product="2C" FT mat_peptide 5013..5273 FT /product="3A" FT mat_peptide 5274..5339 FT /product="3B (VPg)" FT mat_peptide 5340..5888 FT /product="3C" FT mat_peptide 5889..7274 FT /product="3D" FT 3'UTR 7278..7383 XX SQ Sequence 7383 BP; 2184 A; 1544 C; 1697 G; 1958 T; 0 other; ttaaaatagc ctcagggttg ttcccaccct gagggcccac gtggcgtagt actctggtat 60 tacggtacct ttgtacgcct attttacccc cttccccttg taacttagaa gcaaagcaaa 120 ccagttcaat agtaagcaac acaacccagt gttgtgacga acaagtactt ctgtttcccc 180 gggagggtct gacggtaagc tgtacccacg gctgaagtat gacctaccgt taaccggcta 240 cctacttcga gaagtctagt aataccattg aagttttgtt ggcgttacgc tcaacacact 300 accccgtgtg tagttttggc tgatgagtca cggcattccc cacgggcgac cgtggccgtg 360 gctgcgttgc ggccaaccaa ggggcgcaag ctccttggac gtcacttaac agacatggtg 420 tgaagaacct attgagctag gtagtagtcc tccggcccct gaatgcggct aatcctaact 480 ccggagcaca tcagtgcaac ccagcatttg gtgtgttgta atacgcaagt ctggagcgga 540 accgactact ttgggtgtcc gtgtttcctg ttttacctta tttggctgct tatggtgaca 600 atttgatatt gttaccatat agctgttgga ttggccatcc ggatttttga aagagaccca 660 aaactttctt ctctacttca gattcaagtg cgaagttttc cttttcatat attacttact 720 aatttgaagt accaaagatg ggtgcacaaa tttctacaca aaaatctgga tcacatgaaa 780 ctggcactta cgccacagga ggatcaacaa tcaactacac caacataaat tattacaagg 840 atagttatgc agccagtgct tcaaggcaag acttctcaca agatcctgcg aagttcacca 900 agcctgtggt tgatgcgtta actgaagctg ctgttcctct aaaatcacca tcagcagaag 960 cctgtgggta tagtgataga gttttacagt tgacattagg taactcgacc attacaacac 1020 aagaagctgc taacattgtt gtaggttatg gaaaatggcc agagcatttg aaaccgattg 1080 atgcaaactc aattgatgcc ccaacaaaac cagacgtggc tgtgaatagg ttttataccc 1140 taaaagcaaa gaaatgggag aagaattcct caggttggat gtggaaattg ccagactgcc 1200 tgaacgacac tggggtgttt ggccaaaatt gttggtacca tttcttatac agaggtggtt 1260 gggcagtgca tgtgcagtgt aatgcaagta agttccacca aggtgcatta ttagtatttc 1320 tagcaccaga tttcactagg ggggcaccaa ccacaaccac cactggcacc attccaaatg 1380 tatcatactc agatacaatg ccaggagaag atggaacaac gtttaggaat ccgctgttct 1440 tggataatgg gaccatgctg caacaagcaa ctgttttccc acaccaatgg attaatttga 1500 ggacaaacaa cagtgctacc attatagtac catatattaa taacatccca gcagattcac 1560 ctgttcgcca taacaactgg actctttgtg tagtgccagt tgttccccta gattactcag 1620 atggagcaac cacagtagtt ccagtcactg taaccttggc cccaatgtgt tgtgagtttg 1680 atgggttaag aaatgcagtt tcacagggct tgccagttaa ggcaactcca ggatcttatc 1740 agtttctaac cacttctgat gattgctctg aaggattgtt acccaatttc cactccactc 1800 ctgaaatttt tattccaggt caagtaaaca acttactcga gctggttcag attgagacta 1860 tgatgacaat caataatgta gcagcacaaa gtgcaggagt ggaaagaatt tccattcccg 1920 tttctgttca gagtgatgtg gatgctcaaa ttgcagcttt tgctgtcaac cctggtggtg 1980 atggagtttt tcaatcaaca tatctcggcc aaatttgcag gtattttaac aattggtcag 2040 gaagtattga aataaccttc atgttttgtg gttcatttat ggcaacaggc aagatattga 2100 tagcatacac ccctccagga ggtagcgcac ctacagatcg aaagagtgct atgttaggca 2160 cccacataat ttgggatttt gggctacaat cctcagccac ccttgttatt ccctggatta 2220 gtaatacatg tatgcgaaat gttgctagct tggcctatca ggatacctac tttgcaggag 2280 gatttgtcac aatgtggtat caaacaaact ttgtggttcc agctggcgcg cctacaacgg 2340 caaggatcat agcgctctgt gctgccaagg gtgatttttg tctgagatta ctaaaggatt 2400 ctacggacat aacacaatca gcagttctac aaaattcacc agaagcagca attgagggca 2460 taataaatgc taccgtgcac aacataacac cacagaatat tagttcaacc gaggggtcaa 2520 taggttctgc agctccagcg ttgcaggcag cagaaacggg agctaccagc acagccaccc 2580 cagaaggaat gatcgaaact aggagtgtga ttaacagaca acacattgca gaatcttccg 2640 tggaatcatt ttatagtagg gccgggttgg ttggtattgt gcagttgcaa ggtacacaat 2700 ctagtacatt tacaacatgg gtaatagata caatgggctt tgttcaacag agacgcaagt 2760 tagagctgtt cacatacatg aggtttgatg cagagttcac catgctagtg tgtgcggatg 2820 aagagattaa cccttataat atacagtaca tgtatgttcc accaggtagc ggtgttccat 2880 ctgatcatga ttcttacttg tggcaatcag gtaccaaccc atccatatac gtaaaatcca 2940 ctgatccacc cgctcaattc tctattcctt tcatgtctac ttgtgcagcg tatgcatggt 3000 tctatgatgg gtacccgaga gcatacggaa atgatgccgc tcaactgaat aaatcctatg 3060 gtatgctacc agcaaaccag tttggtactt tttgtatgag gttgcttggt agtgctttga 3120 aaactaattt gacagtcaga atttacatga gaccaaaaca tgtcaaatgc tgggcaccaa 3180 gaccattcag gatgttgcct tacgtggaaa agaatagacc atcttaccac acccccccag 3240 ttgatccaat taaaaacaga actaacatca ccacaactgg tgcctttgga caacaaagtg 3300 gctcagtgta cgttggcaat tataagatca ccaaccttca ccttgctaat gagtttgata 3360 aagataatca agtgtggtca tgctatgaaa gagacttgat tgtctcaacc actactgcac 3420 atgggtgtga cacaattgct aggtgcaatt gcaacactgg agtgtatttc tgcaagtcaa 3480 ccaacaagca ttacccagtt tccttccagg gaccaggcct cactttcatt gaagctaatg 3540 aatattatcc agcacgttat cagtctcatg ttttgttggc tgttgggcat gcacaacctg 3600 gtgattgtgg tggcatcttg agatgtgaac atggagtaat aggaattgtg acagcaggag 3660 gagaaggtct tgttgctttt gcagatttga gggacttact atggttggaa gatgatgcaa 3720 tggagcaagg tgtttcagat tacgtgcagc gtctaggttc cgcttttggt gcaggattca 3780 caaatgagat tgctgagaag acccaacaca tcaaagagat gcttattggt caagattcag 3840 tgttagaaaa atgcttgaaa gccctaataa agattgtttc tgctatggta atactcataa 3900 gaaatcatga ggatttaatc acagtcacag ccaccctggc tttgatcggg tgcagtgcta 3960 gtccatggca atggcttaaa tcaaaggtct gctcttattt ccagattccc atggttcaga 4020 agcaagctga cggctggatg aagaaattta ctgaggccac aaatgctgca aaagggttag 4080 agtggctggc taacaagata agcaagttca tcgattgggt gaagtcaaaa attgtacctc 4140 aagtcaaaga gaagctagaa tttctgtcaa aactcaagca gttgcccctt ttggagagtc 4200 agattgccac tattgagcac agtgcaccaa gccaagaagc tcaagaaact ctacatggaa 4260 atgtacagta cttggcccac tattgtagaa aatttgcccc attgtatgct gctgaagcaa 4320 aaagagttta ccacttggaa aagagaatga ataactacat gcggttcaag accaaatccc 4380 gcattgaacc tgtatgtttg ttaatacatg ggagcccagg tgcagggaag tccgttgtat 4440 ccagcctggt ggggcgtgcc attgctgaaa agatgaacag ctcagtttat tcccttccac 4500 cagacccaga tcattttgat ggttacaagc aacaagcagt ggttataatg gatgacttgt 4560 gtcaaaatcc agacggaaaa gatgtgtctc tcctttgcca aatggtgtcg actgttgatt 4620 ttatccctcc aatggcatcc cttgaggaga aaggtatttt atacacttca ccattcatga 4680 ttgcctcaac aaaccacggg agcattagtg cacccaccat ctcagacagt agggccttgg 4740 cacggcggtt cttccttgat gtcgacatat tcattcatga tgagtacaag actgagactg 4800 gaaagttaaa tatgccagcc gcgtgcatgc actgcaactc atgtgaccca gcaaacttca 4860 agagatgctg tcctataatc tgtggaaaag ccctgatgtt cagtgatagg cggacttcag 4920 tgcgttacac cactgatatg ctggtctcag agatgtttag ggaatactca cacaggaact 4980 caattggcaa tgtgcttgag gcactctttc agggaccacc agtctacaag gaattgaaaa 5040 tttcagtggc tgaggaagtg cccccacccc cagctattgc agacctacta aaatcagttg 5100 actcagagga ggttagacac tactgtgaat caaaaggatg gataatacct gccacagaaa 5160 caaatgtaga aagacatatc aacagggcaa tgacaattct tcaagctgtt tccacgtttg 5220 tggcagtggc tggatgtgtt tttgtagtat ataaactgtt tgcaggattt caaggggcgt 5280 acactggtct tccatttact aaaccaaaag tccccacgat cagacaggca aaagtgcaag 5340 gacccaactt tgaatttgca gtagcaatga tgaaaagaaa ttcatgcata gcaaaaacag 5400 ggcaaggtga gttcacgatg ctcggcatat gggacaagtg ggcggtttta ccgcgtcacg 5460 ctaagcctgg agacagtatc attgttgatg acaaggaggt cccagtggaa gatgccaagg 5520 agctagtgga ctctgagggt gttaacctag aactaacttt aataaagttg agaagaaatg 5580 agaaattcag ggacatccga gggtttttgc caaatgaacc aggagaaatt ggtgatgcag 5640 tgcttgctat taatactagc aggttcccaa acatgtttat tcctgtagga aaggtgactg 5700 aatatggatt tctcaatcta agtgggacac caacacacag agtgctcatg tacaacttcc 5760 ctactaaatc agggcagtgc ggtggagtgc taatggcaac aggaaaagtt ctaggaatcc 5820 atgtgggagg caatggacac caaggctttg ctgctactct tttgaggtct tactttaatg 5880 aagaacaggg tcagattgaa tggattgaga ccaacaaaga atcaggctat ccaataatca 5940 atgcccccac caagaccaaa ttggaaccca gtgtgttcca cgatatcttt gagggaaaga 6000 aagaaccagc agtcctgaac ccaagagacc cacgtttgaa gactgatttt gaggaagcca 6060 ttttctccaa gtatgtaggg aatgtgaacg cacatgtgga tgaatacatg aaggaagctg 6120 tcgatcatta tgccggacag ctgttgactc ttgatatcaa tatagaacca ctttgtctgg 6180 aggatgcagt ctatggaact gatggtttag aggcactaga tttaacaaca agtgctggat 6240 atccctatgt aacgttaggg atcaagaaaa gggatattct atcaaagaag actagagacc 6300 tgtccaagtt aagagagtgt atggacaagt acggtctcaa cttacctatg gtgacttatg 6360 tgaaggatga gttgaggagc agggaaaaag tagagcaggg caagtcacgc ttgattgaag 6420 cttccagcct caacgattct gtagcaatga gacaaacatt tggaaacctt tatcggactt 6480 tccataacaa tccaggtgtg atgactggca gtgctgttgg gtgtaatccc gacactttct 6540 ggagcaagat accagtgatg ctagatggtg agttgtttgc ttttgattac acagggtatg 6600 atgcctccct cagtccagtg tggttcgctg cactaaaact ggtactggaa aagttaggtt 6660 acactagtga tgaaaccaag tatattgact acttgtgtaa ctcataccac ttgtataaaa 6720 acaagcatta ctttgtgaga ggagggatgc catcgggatg ttctggcact tctatcttca 6780 acagtatgat caataacatc ataatccgta cgctactgct caaaacatat aaaaacattg 6840 atttggacaa attcagaatg attgcatacg gggatgatgt gattgccagc tacccatacc 6900 caattgatgc gggcctgctt gctaaggcgg gaaaggagta tggcctaaca atgacaccag 6960 cggataagtc cgccaccttc aatgatgtga catgggaaaa cgtcacattt ttgaagaggt 7020 acttcagggc tgacgaacaa tttaactttt tagtacaccc agtcatgccc atgaaggaaa 7080 ttcatgaatc tattagatgg acaaaagatg caaagaacac tcaagaacat gtaagatcac 7140 tgtgcgaatt ggcttggcac aacggtgaag aagcttacaa tgagttttta aataagatta 7200 ggagtgttcc agtaggtcga tgcttgttgc tgcctgcata ttcaacatta aggcgcaaat 7260 ggctcgactc gttttaagaa ttatttgaat attaattact caattaggct aattggctaa 7320 ccctgtcacg tatctggacg tgacaacgcg tgacaggggt gaatttggca catccagggt 7380 gcc 7383 //