ID AF413671; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC AF413671; XX DT 22-FEB-2002 (Rel. 70, Created) DT 25-JAN-2007 (Rel. 90, Last updated, Version 6) XX DE Tomato leaf curl Gujarat virus-[Vadodara] segment DNA-A, complete sequence. XX KW . XX OS Tomato leaf curl Gujarat virus-[Vadodara] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2759 RX AGRICOLA; IND44781954. RA Shih S.L., Tsai W.S., Green S.K., Hanson P.M., Valand G.B., Kalloo G., RA Shrestha S.K., Joshi S.; RT "Molecular Characterization of a New Tomato Begomovirus from India"; RL Plant Dis. 87(5):598-598(2003). XX RN [2] RP 1-2759 RA Shih S.L., Green S.K., Valand G.B., Hanson P.; RT ; RL Submitted (22-AUG-2001) to the INSDC. RL Virology Unit, Asian Vegetable Research and Development Center, P.O. BOX RL 42, Shanhua, Tainan, Taiwan, Republic of China XX DR MD5; 218ce16017a2ff8697948340e6344647. DR EuropePMC; PMC2170441; 17963488. DR EuropePMC; PMC3126389; 21378048. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="Tomato leaf curl Gujarat virus-[Vadodara]" FT /segment="DNA-A" FT /host="tomato" FT /mol_type="genomic DNA" FT /country="India:Gujarat, Vadodara district, south of Anand" FT /note="collected in October 1999" FT /db_xref="taxon:220930" FT gene 145..492 FT /gene="V2" FT CDS 145..492 FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:Q8QYZ0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8QYZ0" FT /protein_id="AAL78665.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTVGYDLIRDL FT ISVIRARNYVEATSRYAHFHARFEGTSPSQLRQPIGEPCCCPHCPRHQSKGMGQPAHVS FT EAQDLQNVQEP" FT gene 305..1075 FT /gene="V1" FT CDS 305..1075 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q8QYY9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8QYY9" FT /protein_id="AAL78666.1" FT /translation="MSKRPADMLIFTPASKVRRRLNFDSPSVSRAAAPIVRVTKAKAWA FT NRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPSGTPSDFQQVFNVYDNEP FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRRFFRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1072..1476) FT /gene="C3" FT CDS complement(1072..1476) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q8QYY8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8QYY8" FT /protein_id="AAL78667.1" FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHQNRPFLMNQDI FT ITVQIQFNHNLRRVLGIHKCFLTYRIWMTSQPPTGRFLRVFRTQVLKFLNNLGVISLNN FT VIRAVNYVLWDALTQTTFVDSSNIIKFNLY" FT gene complement(1217..1621) FT /gene="C2" FT CDS complement(1217..1621) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q8QYY7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8QYY7" FT /protein_id="AAL78668.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKVTRRRRVDLPCGCSYFIALA FT CHDHGFTHRGTHHCSSSREWRVYLGDSKSPIFQDNGAPKPALPDEPRHHHRPDTVQSQP FT EESVGDTQMFPNLPNLDDLTASDWSFLKGI" FT gene complement(1524..2609) FT /gene="C1" FT CDS complement(1524..2609) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q8QYY6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8QYY6" FT /protein_id="AAL78669.1" FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSKKFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKSYM FT EKDGDVVDHGVFQVDGRSARGGCQSANDAYAEAINSGSKAQALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPMDVYVSPFLSSSFDQVPEELEEWAAENVVSSAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNYAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNSALKNWALKNATFVTLEGPL FT YSGTNQSTAQASQEGDQTSTS" FT gene complement(2159..2452) FT /gene="C4" FT CDS complement(2159..2452) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8QYY5" FT /protein_id="AAL78670.1" FT /translation="MGLLTCMCSSSSKESSSAKTIDSSTSHPQPGQHISIRTFRELRAQ FT AMSNPTWKKTETSLIMEFSKSMDDQLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2759 BP; 715 A; 560 C; 642 G; 842 T; 0 other; accggatggc cgcgattttt tttttttgga ccccacaacg cgctaactga caaagacaag 60 tggaccaatc acttgacgcg ctcaaagctt aattgttttg tgttctctat ttaaacttgg 120 gcaccaagta gtgtacttcg tactatgtgg gatcctttgt taaacgagtt tcctgaaacc 180 gttcacggtt ttagatgtat gctagcagtt aaatatcttc agttagtaga aaagacttat 240 tctcctgaca cagtcggtta cgatttaatc agggatttaa tttcagttat tagggctaga 300 aattatgtcg aagcgaccag cagatatgct cattttcacg cccgcttcga aggtacgtcg 360 ccgtctcaac ttcgacagcc catcggtgag ccgtgctgct gcccccattg tccgcgtcac 420 caaagcaaag gcatgggcca accggcccat gtatcggaag cccaggatct acagaatgta 480 caggagccct gatgtgccta agggctgtga gggcccgtgt aaggtccaat cgttcgatgc 540 taagaacgat attggtcaca tgggtaaggt gatctgtttg tccgatgtta cgaggggaat 600 tgggctgacc catcgagtgg gtaaacgttt ttgcgttaag tctttgtatt ttgtcgggaa 660 gatctggatg gacgagaata ttaaggtgaa gaaccacacc aacaccgtta tgttttggat 720 agtacgtgat aggcgtccta gtgggactcc cagtgatttt cagcaggttt ttaacgtata 780 tgataatgag ccctctacgg cgactgttaa gaatgaccag cgtgatcgct ttcaagtcct 840 acggaggttt caggcgactg ttactggagg acaatatgca gccaaggagc aggcgataat 900 tagaagattt tttcgtgtta ataattacgt agtttataat caccaggaag ctgggaagta 960 cgaaaatcat actgagaatg ctttgttgtt gtatatggca tgtactcatg cctctaatcc 1020 tgtgtatgcg actctgaaag tgaggagtta tttctatgac tcagttacaa actaataaag 1080 attaaatttt attatattcg aactgtctac aaatgttgtt tgcgtcaatg catcccatag 1140 tacataattc actgctctaa ttacattatt caaactaatt acacccaaat tattaagaaa 1200 tttcaacact tgtgtcctaa atacccttaa gaaacgacca gtcggaggct gtgaggtcat 1260 ccagattcgg taggttagga aacatttgtg tatccccaac actctcctca ggttgtgatt 1320 gaactgtatc tggacggtga tgatgtcttg gttcatcagg aagggccggt tttggtgctc 1380 cgttatcttg aaatataggg gattttgaat ctcccagata aacacgccat tctctgcttg 1440 agctgcagtg atgagttccc ctgtgcgtga atccatggtc gtggcaggct aatgctatga 1500 agtaagaaca gccgcatggt agatcaactc gtcgacgtct ggtcaccttc ttggctagcc 1560 tgtgctgtac tttgattggt acctgagtag agtgggcctt cgagggtgac gaaggtcgca 1620 ttttttaaag cccagttttt tagtgcagaa ttcttttcct catccaagta ttctttatag 1680 ctggagttgg gtcctggatt gcagaggaag atagtgggaa ttccgccttt aatttgaact 1740 ggcttcccgt actttgtatt tgattgccag tccctttggg cccccatgaa ttctttaaag 1800 tgctttaggt agtgggggtc gacgtcatca atgacgttgt accaggcata attactgtat 1860 acctttgggc taaggtctag atgaccacac aaataattat gtggtcctaa tgatctggcc 1920 cacatagtct tccccgtcct actgtcaccc tcaattacta tacttatggg tctcagaggc 1980 cgcgcagcgg aactgacgac gttctcggca gcccactctt caagttcttc tggaacttgg 2040 tcgaaagaag aagataaaaa aggtgaaaca taaacatcca ttggaggtgt aaaaatccta 2100 tctaaattag aatttaaatt gtgaaattgt aaaacaaaat ctttgggagc tttctccctt 2160 aatatattga gggcctgagc tttggaccct gaattgattg cctcggcata tgcgtcgttg 2220 gcagattggc aacctcctct agctgatcgt ccatcgactt ggaaaactcc atgatcaacg 2280 acgtctccgt ctttttccat gtaggatttg acatcgcttg agctcttagc tccctgaatg 2340 ttcggatgga aatgtgctga cctggttggg gatgtgaggt cgaagaatct attgtttttg 2400 cactggaact ttccttcgaa ctggatgagc acatgcaagt gaggagtccc atcttcgtga 2460 agctctctgc aaattctaat aaattttttg gaagtgggtg tttggagatt taataattgg 2520 gaaagtgcct cttctttagt tagagagcac ttgggataag tgagaaaata atttttggca 2580 tttattttaa agcgattggg ggctgccatg ttgacttggt caatcggtgt ctctcaactc 2640 tctctatgta tcggtgtatt ggagtcctat atatatggag actctaatgg cataaatgta 2700 aatattgaac tttaaattca aaaccctcac gctccaatct cggccatccg tataatatt 2759 //