ID   AF404345; SV 1; linear; viral cRNA; STD; VRL; 2046 BP.
XX
AC   AF404345;
XX
DT   25-JAN-2002 (Rel. 70, Created)
DT   31-AUG-2025 (Rel. 144, Last updated, Version 10)
XX
DE   Infectious salmon anemia virus segment 3 putative nucleocapsid protein (NP)
DE   gene, complete cds.
XX
KW   .
XX
OS   Infectious salmon anemia virus
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Insthoviricetes; Articulavirales; Orthomyxoviridae; Isavirus;
OC   Isavirus salaris.
XX
RN   [1]
RP   1-2046
RX   PUBMED; 11807235.
RA   Clouthier S.C., Rector T., Brown N.E., Anderson E.D.;
RT   "Genomic organization of infectious salmon anaemia virus";
RL   J. Gen. Virol. 83(Pt 2):421-428(2002).
XX
RN   [2]
RP   1-2046
RA   Clouthier S.C., Rector T., Brown N.E., Anderson E.D.;
RT   ;
RL   Submitted (01-AUG-2001) to the INSDC.
RL   Biochemistry, Microbiology and Molecular Biology, University of Maine, 5735
RL   Hitchner Hall, Orono, ME 04469, USA
XX
DR   MD5; 55c1ee9593dbe165486d1f58f6f0086b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2046
FT                   /organism="Infectious salmon anemia virus"
FT                   /segment="3"
FT                   /isolate="CCBB"
FT                   /mol_type="viral cRNA"
FT                   /geo_loc_name="Canada"
FT                   /db_xref="taxon:2907958"
FT   gene            49..1899
FT                   /gene="NP"
FT   CDS             49..1899
FT                   /codon_start=1
FT                   /gene="NP"
FT                   /product="putative nucleocapsid protein"
FT                   /protein_id="AAL67961.1"
FT                   /translation="MADKGMTYSFDVRDNTLVVRRSTATKSGIKISYREDRGTSLLQKA
FT                   FAGTEDEFWVELDQDVYVDKKIREFLVEEKMKDMSTRVSGAVAAAIERSVEFDNFSKEA
FT                   AANIEMAGVDDEEAGGSGLVDNRRKNKGVSNMAYNLSLFIGMVFPALTTFFSAILSEGE
FT                   MSIWQNGQAIMRILALADEDGKRQTRTGGQRVDMADVTKLNVVTANGKVKQVEVNLNDL
FT                   KAAFRQSRPKRSDYRKGQGSKATESSISNQCMALIMKSVLSADQLFAPGVKMMRTNGFN
FT                   ASYTTLAEGANIPSKYLRHMRNCGGVALDLMGMKRIKNSPEGAKSKIFSIIQKKVRGRC
FT                   RTEEQRLLTSALKISDGENKFQRIMDTLCTSFLIDPPRTTKCFIPPISSLMMYIQEGNS
FT                   VLAMDFMKNGEDACKICREAKLKVGVNSTFTMSVARTCVAVSMVATAFCSADIIENAVP
FT                   GSERYRSNIKANTTKPKKDSTYTIQGLRLSNVRYEARPETSQSNTDRSWQVNVTDSFGG
FT                   LAVFNQGAIREMLGDGTSETTSVNVRALVKRILKSASERSARAVKTFMVGEQGKSAIVI
FT                   SGVGLFSIDFEGVEEAERITDMTPEIEFDEDDEEEEDIDI"
XX
SQ   Sequence 2046 BP; 721 A; 373 C; 504 G; 448 T; 0 other;
     agcaaagatt gctcaaatcc caaaaataat acagaaaacg tataagagat ggccgataaa        60
     ggtatgactt attcttttga tgtcagagac aacaccttgg ttgtaagaag atctaccgct       120
     actaaaagtg gcattaagat ctcctacaga gaggatcgag gaacatcact tctccaaaag       180
     gcattcgccg ggacagaaga tgaattctgg gtggagttag atcaagatgt ctacgttgac       240
     aaaaagatta gagaattcct ggtagaagag aaaatgaagg acatgagcac aagagtgtct       300
     ggggcagtgg cagcagcaat tgaaagatca gttgaatttg acaatttctc aaaagaagca       360
     gcagctaaca ttgaaatggc tggtgtagat gatgaagaag ctggaggaag tggtctggta       420
     gacaacagaa ggaagaacaa aggggtctca aacatggcct acaatctgtc tctattcata       480
     gggatggtgt ttcctgctct cactactttc ttcagtgcta tcctatcaga aggtgaaatg       540
     agcatctggc aaaatggaca agcaatcatg agaattctgg cactggcaga tgaagacgga       600
     aagagacaaa caagaacagg aggacagagg gtggacatgg ctgatgtaac caagctgaac       660
     gtagtcacgg ctaacggaaa agtcaagcaa gttgaagtaa acttgaacga tctcaaagca       720
     gcattcaggc agagtagacc taaaagatcg gactacagaa aagggcaagg ttccaaggct       780
     acagaatcaa gcatctccaa ccaatgtatg gcactgatta tgaaatctgt gctgtcagca       840
     gaccaacttt ttgctccggg agtgaagatg atgaggacga acggtttcaa tgcgtcgtac       900
     acaacactgg cagaaggggc aaacattccg agcaagtacc taagacacat gaggaactgc       960
     ggaggagtag ctctggacct gatgggaatg aagaggatca aaaactcacc tgaaggagcc      1020
     aagtctaaga tcttttccat catccagaag aaagtaagag gaagatgtcg cacagaggag      1080
     caacgcctcc tgactagcgc actgaaaatc agcgacggtg aaaacaagtt ccagagaatc      1140
     atggacactc tatgtacaag cttcctgatt gaccctccaa gaactaccaa atgcttcatt      1200
     ccacctattt ccagtctcat gatgtacatc caagaaggca actctgtact ggcaatggat      1260
     ttcatgaaaa acggagagga cgcctgcaag atctgcagag aagccaaact gaaagtgggg      1320
     gtaaacagta cgttcacaat gtcagtagct agaacatgcg ttgcagtgtc aatggttgca      1380
     acagcttttt gttctgcaga tatcatcgag aatgcagtgc ctggttccga aaggtacaga      1440
     tccaacatca aggctaacac aaccaaacca aaaaaggact ccacttacac aattcaagga      1500
     cttagattgt ctaacgtgag gtatgaagca agacctgaaa catcacaaag caacacagac      1560
     agaagttggc aagtgaacgt gactgacagc ttcggaggac ttgctgtgtt caaccaaggg      1620
     gcaattagag aaatgctagg agacggaaca tcagagacaa ctagtgtgaa cgtcagagcc      1680
     ctggtgaaga gaattctgaa atcagcttca gagaggagtg caagagctgt aaagacattt      1740
     atggtgggag aacaagggaa atcagctatt gttatctctg gtgtgggact gttctctatt      1800
     gactttgaag gggtagagga agcggaaaga ataactgaca tgacacctga aattgagttt      1860
     gacgaggacg acgaggaaga ggaagacatt gacatttaga gtgacaatta tgtaacttcc      1920
     taattaccct atattgtttg aatatataat gaaactattg tgtgttaaag gttgtgggtt      1980
     tgattattaa atttaaattg aaacggtatt gacgatattt acaaaaaaaa aaaaaaaaaa      2040
     aaaaaa                                                                 2046
//