ID   AF404342; SV 1; linear; viral cRNA; STD; VRL; 1323 BP.
XX
AC   AF404342;
XX
DT   25-JAN-2002 (Rel. 70, Created)
DT   31-AUG-2025 (Rel. 144, Last updated, Version 9)
XX
DE   Infectious salmon anemia virus segment 6 putative HA protein (HA) gene,
DE   complete cds.
XX
KW   .
XX
OS   Infectious salmon anemia virus
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Insthoviricetes; Articulavirales; Orthomyxoviridae; Isavirus;
OC   Isavirus salaris.
XX
RN   [1]
RP   1-1323
RX   PUBMED; 11807235.
RA   Clouthier S.C., Rector T., Brown N.E., Anderson E.D.;
RT   "Genomic organization of infectious salmon anaemia virus";
RL   J. Gen. Virol. 83(Pt 2):421-428(2002).
XX
RN   [2]
RP   1-1323
RA   Clouthier S.C., Rector T., Brown N.E., Anderson E.D.;
RT   ;
RL   Submitted (01-AUG-2001) to the INSDC.
RL   Biochemistry, Microbiology and Molecular Biology, University of Maine, 5735
RL   Hitchner Hall, Orono, ME 04469, USA
XX
DR   MD5; 408c1f683f44e9f9f9b4dc1d0f142c98.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1323
FT                   /organism="Infectious salmon anemia virus"
FT                   /segment="6"
FT                   /isolate="CCBB"
FT                   /mol_type="viral cRNA"
FT                   /geo_loc_name="Canada"
FT                   /db_xref="taxon:2907958"
FT   CDS             8..1192
FT                   /codon_start=1
FT                   /gene="HA"
FT                   /product="putative HA protein"
FT                   /protein_id="AAL67958.1"
FT                   /translation="MARFIILFLLLAPVYSRLCLRNHPDTTWIGDSRSDQSRVNQQSLD
FT                   LVTNFKGILQAKNGNGLMKQMSGRFPSDWYQPTTKYRILYIGTNDCTEGPNDVIIPTSM
FT                   TLDNVARDLYLGACRGDVRVTPTFVGAAELGLIGRTDALTEFSVKVLTFNNPTIVVVGL
FT                   NGMSGIYKVCIAASSGNVGGVNLVNGCGYFSAPLRFDNFKGQIYVSDTFEVRGTKNKCV
FT                   ILRSSSNAPLCTHIKRNIELDEYVDTPNTGGVYPSDGFDSLHGSASIRTFLTEALTCPG
FT                   VDWDRIDAASCEYDSCPKLVKEFDQTGLGNTDTQIMRELEAQKEMIGKLGRNITDVNNR
FT                   VDAIPPQLSNIFISMGVAGFGIALFLAGWKACVWIAAFMYKSRGRNPPANLSVA"
FT   gene            8..1192
FT                   /gene="HA"
XX
SQ   Sequence 1323 BP; 404 A; 257 C; 306 G; 356 T; 0 other;
     agcaaagatg gcacgattca taattttatt cctactgttg gcgcctgttt acagtcgtct        60
     atgtcttaga aaccatcctg acaccacctg gataggtgac tcccgaagcg atcaatcaag       120
     ggtgaaccaa cagtctcttg atctggttac aaacttcaag ggaattctac aagccaagaa       180
     cgggaatggt ctcatgaagc agatgagcgg aaggttccca agtgattggt accaacctac       240
     tacaaagtat aggattctat acattggtac aaacgactgc actgagggcc ctaacgacgt       300
     gatcataccg acgtcaatga cactagacaa tgtggcaagg gacctgtacc tgggagcatg       360
     tcgaggagat gtaagagtga caccaacctt cgtgggagca gctgagcttg gactgattgg       420
     gagaacagat gccttaacag aattttctgt aaaggtgctg actttcaaca accctactat       480
     tgtagtagtt ggactaaatg gaatgtcagg aatctacaag gtctgcattg ctgcctcttc       540
     tggaaacgta ggcggagtca acttggtgaa cggatgcgga tacttcagcg ctcctctgag       600
     attcgacaac ttcaaaggac agatctacgt gtcagacacc tttgaagtca gaggaacaaa       660
     gaacaaatgt gtcatactta gatcttctag caatgctcct ttgtgtacac atatcaaaag       720
     aaacattgag ttggatgagt acgttgacac accaaacact gggggcgtat atccttctga       780
     tgggtttgat tctcttcacg gctctgcttc gattagaact tttttaacag aggcactgac       840
     atgtccaggt gtagattggg acagaattga tgcagcttca tgcgagtatg acagttgtcc       900
     taaacttgtg aaagaatttg accaaacagg gctcggaaac acagatactc aaataatgag       960
     agagctagaa gcacaaaagg agatgattgg taaacttggc agaaacatta cagacgtaaa      1020
     caacagagta gatgctattc caccacagct tagcaacatc ttcatctcta tgggagtggc      1080
     aggttttggg atagcactgt ttctagcagg gtggaaggct tgtgtttgga tagcagcttt      1140
     catgtataag tctagaggta gaaacccacc tgcaaatctg tctgttgctt gatactaaga      1200
     caaacaaagt tttcaaataa tcaaatgttt tctaatgtaa tgtaaaattc aaatcgtatg      1260
     tgatattatt attttgaaga cgttcttgat gttgtacgtt tacagaaaag tgcatttttt      1320
     act                                                                    1323
//