Dbfetch

Dbfetch

ID   AF403408; SV 1; linear; genomic RNA; STD; VRL; 820 BP.
XX
AC   AF403408;
XX
DT   12-AUG-2002 (Rel. 72, Created)
DT   29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE   Golden shiner reovirus segment 11 non-structural protein NS3 gene, complete
DE   cds.
XX
KW   .
XX
OS   Golden shiner reovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus.
XX
RN   [1]
RP   1-820
RX   PUBMED; 12124458.
RA   Attoui H., Fang Q., Jaafar F.M., Cantaloube J.F., Biagini P., De Micco P.,
RA   De Lamballerie X.;
RT   "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed
RT   by genome characterization of Golden shiner reovirus, Grass carp reovirus,
RT   Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family
RT   Reoviridae)";
RL   J. Gen. Virol. 83(Pt 8):1941-1951(2002).
XX
RN   [2]
RP   1-820
RA   Attoui H., de Micco P., de Lamballerie X.;
RT   ;
RL   Submitted (30-JUL-2001) to the INSDC.
RL   Virologie, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
RL   Marseille 13005, France
XX
DR   MD5; c35662e683fa378662aedf5a019ddcae.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..820
FT                   /organism="Golden shiner reovirus"
FT                   /segment="11"
FT                   /mol_type="genomic RNA"
FT                   /note="Golden shiner reovirus"
FT                   /db_xref="taxon:185783"
FT   CDS             43..777
FT                   /codon_start=1
FT                   /product="non-structural protein NS3"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8JU52"
FT                   /protein_id="AAM92755.1"
FT                   /translation="MATAGITAAIDDLVISRIDEAITNNTLVQRLRKKVSSLWKDYDAH
FT                   VSDPTAHELLTMPAALADLPPPPPPTDDEINRSFYATALPSVVPTSDTLWGTASYEIIG
FT                   RAVRIASSDKAPRLILHVTDETIRLEVPTMSFTLASPLSTGSLLRVTLPRGAIHSSLTG
FT                   KFDERCWVRLLSTLTKWSTPSTMVTSDWTLDTTTGLTKPPVTGFNARATVKDSAIVMWF
FT                   PAPDIATSARRAIVSPMSCVFE"
XX
SQ   Sequence 820 BP; 161 A; 288 C; 196 G; 175 T; 0 other;
     gttattgttt ccttccttgc ttactcgcct taaacttcaa acatggccac cgcaggaatc        60
     accgccgcta tcgacgacct tgtcattagc cgcattgatg aagcaattac caacaacaca       120
     cttgtccaac gactccgcaa gaaggtctcc tccctgtgga aggactatga cgctcacgtg       180
     tctgacccca ccgcccacga actcctcacc atgcctgccg cacttgctga cctcccccct       240
     ccgccgcccc cgactgatga tgagatcaat cgtagtttct acgcgactgc tctgccaagc       300
     gttgtgccga cctccgacac tctgtgggga acagccagct atgagataat cggccgcgcg       360
     gtccgtatcg catcgagtga caaagcgccg aggttgattt tgcacgtcac ggacgaaacc       420
     atccgcctgg aggtgccgac aatgtccttc actctcgcca gccctttgtc cactggctct       480
     ctactgcgcg tcacgctccc caggggcgcc atccactcat ccctcaccgg caagttcgat       540
     gagcgctgct gggtgcgttt gctgtccacc ctcacgaagt ggtccacccc cagcaccatg       600
     gtcaccagtg actggacgtt ggacaccacc accggtctga ccaaaccccc cgtcactgga       660
     ttcaacgccc gtgcgaccgt taaagactcc gccatcgtta tgtggttccc cgctcccgac       720
     atcgcaacct ccgctcgtcg ggcgatcgtg agtccaatgt cgtgcgtgtt tgaatgagcg       780
     gcgcaggggt gaccacccag gcggggagga tcctttcatc                             820
//