Dbfetch

Dbfetch

ID   AF403406; SV 1; linear; genomic RNA; STD; VRL; 1130 BP.
XX
AC   AF403406;
XX
DT   12-AUG-2002 (Rel. 72, Created)
DT   29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE   Golden shiner reovirus segment 9 non-structural protein NS2 gene, complete
DE   cds.
XX
KW   .
XX
OS   Golden shiner reovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus.
XX
RN   [1]
RP   1-1130
RX   PUBMED; 12124458.
RA   Attoui H., Fang Q., Jaafar F.M., Cantaloube J.F., Biagini P., De Micco P.,
RA   De Lamballerie X.;
RT   "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed
RT   by genome characterization of Golden shiner reovirus, Grass carp reovirus,
RT   Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family
RT   Reoviridae)";
RL   J. Gen. Virol. 83(Pt 8):1941-1951(2002).
XX
RN   [2]
RP   1-1130
RA   Attoui H., de Micco P., de Lamballerie X.;
RT   ;
RL   Submitted (30-JUL-2001) to the INSDC.
RL   Virologie, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
RL   Marseille 13005, France
XX
DR   MD5; 73ef7a08c829eb9b28c86ed6849b8bcb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1130
FT                   /organism="Golden shiner reovirus"
FT                   /segment="9"
FT                   /mol_type="genomic RNA"
FT                   /note="Golden shiner reovirus"
FT                   /db_xref="taxon:185783"
FT   CDS             32..1090
FT                   /codon_start=1
FT                   /product="non-structural protein NS2"
FT                   /db_xref="GOA:Q8JJE2"
FT                   /db_xref="InterPro:IPR002507"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8JJE2"
FT                   /protein_id="AAM92753.1"
FT                   /translation="MAHTGTATLINAERTDRTLRLLETFPSLTITIRQDTSGRDLVSSV
FT                   YSATGMSAAARNLNPIANVKNMRQPGYVKPAHTATNTVPLRVATSTGLELPTAHLAQMP
FT                   VDQALRDAVAAAVPAHAARVLPPNVDRVTPLTLASRVAMVCAGLDCDDIHEIAPAPTAM
FT                   ALAFTTKVLLIHVVVDGTGASIAVNPGAARDLLKADQLGNVITNYGYDVRGTVRRDTAA
FT                   ALAPSELPDTYPIEWLGLICGLIATQIELDLDMLAMNQTEQKLIAPHVQAVDPFINRLQ
FT                   SYATLSSRLMHLCVTHAQRPFRDFPELLRHWQKPELTPAIPVNIALKGAALEVSGNGAE
FT                   LFRVRALPIGGM"
XX
SQ   Sequence 1130 BP; 222 A; 384 C; 267 G; 257 T; 0 other;
     gttattttga gcttaccgat tgacaaccat catggcacac acaggcaccg ctactctgat        60
     caatgccgag cgcacagatc gaactctccg cctcctcgaa acttttcctt ccctgacaat       120
     caccatcaga caggacacgt ccgggcgtga tctcgtgtct tccgtgtact ccgcgactgg       180
     tatgtctgcc gcagctcgaa acttgaaccc catcgccaac gtcaagaaca tgcgccaacc       240
     cggctacgtc aagcccgccc acaccgctac taacactgtc ccactccgcg tcgccacctc       300
     caccggcttg gaactcccca ctgctcatct cgcccagatg cccgttgacc aagcgctgcg       360
     tgatgccgtt gccgctgccg ttcccgccca tgctgcacgc gtgttgcccc cgaacgtcga       420
     ccgggtcact cctctaacgc tcgcctctcg cgtagccatg gtctgcgctg gtctcgactg       480
     tgacgatatc cacgagattg ctcctgctcc taccgctatg gcactggcat tcactaccaa       540
     agttctttta attcacgtcg tcgttgatgg aactggcgcg tctattgccg tcaaccccgg       600
     tgccgctcgt gacttgctga aggcagacca gcttggtaat gtcatcacta attatggtta       660
     tgatgtccgg ggaaccgtgc gacgtgacac cgctgccgct ctggcgcctt ctgaactacc       720
     cgacacctat cccatcgagt ggctgggtct catctgcggt ctaatcgcga ctcagatcga       780
     gttggacctt gacatgctgg ccatgaatca gactgagcag aagctcatcg cgccccacgt       840
     tcaggctgta gatccattta tcaaccgcct gcaaagctac gccactctct cctctcgtct       900
     gatgcatcta tgtgtcactc acgcccaaag gccattccgt gacttccccg aactgcttcg       960
     ccactggcag aaaccggagt tgacccccgc catacccgtt aacatcgccc tgaaaggagc      1020
     tgccctagag gtatcgggta acggcgctga gttgtttcgc gtgagggcct tgccgatcgg      1080
     aggtatgtaa gggtgtggtc accacccgca tgccgctcag agctatcatc                 1130
//