ID   AF403403; SV 1; linear; genomic RNA; STD; VRL; 2039 BP.
XX
AC   AF403403;
XX
DT   12-AUG-2002 (Rel. 72, Created)
DT   29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE   Golden shiner reovirus segment 6 putative outer capsid VP4 gene, complete
DE   cds.
XX
KW   .
XX
OS   Golden shiner reovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus.
XX
RN   [1]
RP   1-2039
RX   PUBMED; 12124458.
RA   Attoui H., Fang Q., Jaafar F.M., Cantaloube J.F., Biagini P., De Micco P.,
RA   De Lamballerie X.;
RT   "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed
RT   by genome characterization of Golden shiner reovirus, Grass carp reovirus,
RT   Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family
RT   Reoviridae)";
RL   J. Gen. Virol. 83(Pt 8):1941-1951(2002).
XX
RN   [2]
RP   1-2039
RA   Attoui H., de Micco P., de Lamballerie X.;
RT   ;
RL   Submitted (30-JUL-2001) to the INSDC.
RL   Virologie, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
RL   Marseille 13005, France
XX
DR   MD5; 73c6780153a6937fc68c49d21184e505.
DR   EuropePMC; PMC5123877; 16297481.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2039
FT                   /organism="Golden shiner reovirus"
FT                   /segment="6"
FT                   /mol_type="genomic RNA"
FT                   /note="Golden shiner reovirus"
FT                   /db_xref="taxon:185783"
FT   CDS             31..1977
FT                   /codon_start=1
FT                   /product="putative outer capsid VP4"
FT                   /db_xref="GOA:Q8JU57"
FT                   /db_xref="InterPro:IPR009113"
FT                   /db_xref="InterPro:IPR015960"
FT                   /db_xref="InterPro:IPR015962"
FT                   /db_xref="InterPro:IPR036256"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q8JU57"
FT                   /protein_id="AAM92749.1"
FT                   /translation="MGNVQTSVNTYNITGDGNSFTPTSDMTSTAAPAIDLKPGVLNPTG
FT                   KLWRPVGTSVATIDSLAIVSDRFGQYSFVNEGMRETFSKALFDINMWQPLFQATKTGCG
FT                   PIVLSSFTTTTSGYVGATAGDALDNPVTNGVFISTVQVMNLQRTIAARMRDVALWQQHL
FT                   DTAMTMLTPDISAGSASCNWKSLLAFAKDILPLDNLCLTYPNEFYNVAIHRYPALKPGN
FT                   PDTKLPDAQAHPLGEVAGAFNAATSEVGSLVGSSSTLSQAISTMAGKDLDLIEADTPLP
FT                   VSVFTPSLAPRSYRPAFIKPEDAKWIAEFNNSSLIRKTLTYSGATYAVQLGPGPTRVID
FT                   MNAMIDSVLTLDVSGTILPYDTNPDLSTSVPAFVLIQTSVPIQQVTTAANITAITVVSA
FT                   AGASAINLAINVRGQPRFNMLHLQATFERETITGIPYIYGLGTFLIPSPTSSSNFSNPT
FT                   LMDGLLTVTPVLLRETTYKGEVVDAIVPATVMANQTSEEVASALANDAIVLVSNHLNKL
FT                   ANVVGDAIPVASKTDDSATSAIVSRLAVQHKLSQVGQTSPTPPDYPLLWRRAKRAASMF
FT                   VSNPSLALQVGIPVLTQSGMLSALTSGVGTALRTGSLGKGVTDASEKLRARQSLTVAKQ
FT                   AFFDQIGSLWPGK"
XX
SQ   Sequence 2039 BP; 434 A; 667 C; 451 G; 487 T; 0 other;
     gttatttcga cacttcgcac tctctctaca atggggaacg ttcaaacctc cgtcaacact        60
     tacaatatta ctggggatgg taattcattt acccccacct ctgacatgac atccactgcc       120
     gccccggcca ttgaccttaa acctggggtc ctcaatccta ctggcaagct atggcgaccc       180
     gtcggtactt ccgttgccac catcgactca cttgccatcg tcagcgatcg ttttggtcag       240
     tattcatttg tcaatgaagg catgcgagag accttttcaa aagcactctt cgacatcaat       300
     atgtggcaac ctctgttcca agcgacaaag actggctgcg gaccgatcgt actctcctcc       360
     ttcacaacca ccacctctgg ttatgttggt gccactgccg gtgatgccct tgataaccct       420
     gtgacgaatg gcgttttcat cagtacggtg caagtcatga acctccagcg gaccatcgct       480
     gctcgcatgc gtgatgtcgc tctctggcag caacacttag acaccgccat gaccatgctg       540
     acacctgaca tttctgctgg tagtgcctcc tgcaactgga agagcctgct cgctttcgcg       600
     aaggatatcc tgcccctcga caacctgtgc ctcacctacc cgaatgagtt ctataacgtt       660
     gccatccacc gttatcctgc actcaagcct ggcaacccag acaccaagct gcccgatgcc       720
     caggcccatc cgctgggaga agtcgccggt gctttcaatg ccgccacctc tgaagttgga       780
     agtctcgttg gttccagctc cactctctca caggccatct ccaccatggc tggcaaagac       840
     ctagatctaa ttgaagccga caccccgctc cccgtgagcg tgtttactcc atctctcgcc       900
     cctcgctcct atcgccccgc cttcattaaa cctgaggatg ctaagtggat cgcggagttc       960
     aataactcat ctctcatacg taagactctc acctactcgg gtgccaccta cgccgttcaa      1020
     ctcggccccg gtccaactcg cgtcattgat atgaatgcga tgatcgactc cgtgctgacc      1080
     ttagatgtga gcggtacgat cctcccctat gacacaaatc ctgatctgtc tacttcagtt      1140
     ccagctttcg tcctcatcca gacctcagta ccaattcaac aagttaccac cgctgctaac      1200
     atcacagcca tcaccgttgt atccgccgct ggcgcttccg ccatcaacct cgccatcaat      1260
     gtacgcggcc agccccgatt caacatgctc cacctgcaag ccaccttcga gcgcgagacc      1320
     atcaccggga ttccgtatat ctatggcttg ggcacgttcc tcatcccatc acccacatct      1380
     tcttccaact tctccaaccc cacgctgatg gacggtctcc tcactgtcac cccagtgctg      1440
     ctgcgtgaga cgacatacaa gggcgaagtt gtcgacgcca tcgtgccggc taccgtgatg      1500
     gccaaccaaa cttctgagga ggtcgcttct gccttagcta acgacgcaat cgtgttagtg      1560
     tcaaatcatc tcaacaaatt ggccaatgtc gtaggagacg ccatccccgt tgcctcaaag      1620
     acggatgatt ccgcgactag cgctatcgtc agtcgactcg ctgtccagca caagttgtca      1680
     caagtaggcc aaacctcacc cacccccccc gattacccac ttctgtggcg tcgtgccaag      1740
     cgtgctgcgt ctatgttcgt ctctaacccc tccctggcct tgcaggtagg tatccctgtg      1800
     ttaactcaat ctggcatgct ttccgcccta acgtccggcg tgggtacggc tttacgtact      1860
     ggtagcttgg gtaaaggtgt gaccgatgcg tcagaaaaac tacgtgcgcg ccaaagcttg      1920
     acggttgcga agcaagcgtt cttcgatcag atagggagcc tgtggcccgg caagtgaggg      1980
     gtgggttgac aacccccttc catgcccgcg tgaacggcgg ggagtgtcgt actttcatc       2039
//