Dbfetch
ID AF389463; SV 1; linear; genomic RNA; STD; VRL; 3853 BP. XX AC AF389463; XX DT 19-JUL-2001 (Rel. 68, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Lymantria dispar cypovirus 1 segment 2, complete sequence. XX KW . XX OS Lymantria dispar cypovirus 1 OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Cypovirus. XX RN [1] RP 1-3853 RA Rao S., Shapiro M., Lynn D., Hagiwara K., Blackmon B., Fang G., RA Carner G.R.; RT "Identification of dsRNA electrophoretypes of two cypoviruses from a dual RT infection in gypsy moth, Lymantria dispar"; RL Unpublished. XX RN [2] RP 1-3853 RA Rao S.; RT ; RL Submitted (08-JUN-2001) to the INSDC. RL Dept. of Entomology, Clemson University, Room 113 Long Hall, Box 340365, RL Clemson, SC 29634, USA XX DR MD5; 9b8e32c59e149a807f6bbb28f9dfcbb9. DR EuropePMC; PMC6410231; 30744159. XX FH Key Location/Qualifiers FH FT source 1..3853 FT /organism="Lymantria dispar cypovirus 1" FT /segment="2" FT /mol_type="genomic RNA" FT /db_xref="taxon:165803" FT CDS 78..3755 FT /codon_start=1 FT /gene="pol" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q91IE0" FT /db_xref="InterPro:IPR007097" FT /db_xref="UniProtKB/Swiss-Prot:Q91IE0" FT /protein_id="AAK73521.1" FT /translation="MLPNTELHTTEFSKTRKFTRQSFKQIEQLTASLANDRVARHKFLF FT NNSLPLISDYSGEDSNGHQLQATIKIPDEITNPKEYDPSDYPLAEDESFFKQGHKYDYL FT VTFRAGSLTNTYEPKTKMYKLHAALDRLMHVKQRKSRFADLWRELCAVIASLDVWYQTT FT NYPLRTYVKFLFHKGDEFPFYESPSQDKIVFNDKSVASILPTFVYTCCQVGTAIMSGIL FT THVESIAAMNHFLHCAKDSYIDEKLKVKGIGRSWYQEALHNVGQVTVPVWSQFNEIIGH FT RTKNTSEPHFVSATFTALRAKRAELLYSEFNDYINRALRLSKTQNDVANYYAACRAMTN FT DGTFLATLTELSLDAAVFPRIEQRLVTRPAVLMSNARHESLRQKYTDGVGSIAQSYLSS FT FTDEVARRVNGIHHDEAWLNFLTTSSPGRKLTEIEKLEVGGDVAAWSNSRIVMQAVFAR FT EYRTPERIFKSLKAPIKLVERQQSDRRQRAISGLDNDRLFLSFMPYTIGKQIYDLNDNA FT AQGKQAGNAFDIGEMLYWTSQRNVLLSSIDVAGMDASVTTNTKDIYNTFVLDVASKCTV FT PRFGPYYAKNMEVFEVGKRQSQVKYVNAAWQACALEAANSQTSTSYESEIFGQVKNAEG FT TYPSGRADTSTHHTVLLQGLVRGNELKRASDGKNSCLATIKILGDDIMEIFQGSQDDTH FT HHAVSNANVLNESGFATTAELSQNSIVLLQQLVVNGTFWGFADRISLWTREDTKDIGRL FT NLAMMELNALLDDLLFRVRRPEGLKMLGFFCGAICLRRFTLSVDNNLYDSTYNSLSKYM FT TLIKYDKNPDFDSTLMSLILPLTWLFMPRGGEYPAYPFERRDGTFTEDESMFTARGAYK FT RRLLYDISNIREMIQQNSLALDDELLHEYGFTGASLLIDLNILDLIDEVKKEDISPVKV FT SELATSLEQLGKLGEREKSRRAASDLKVRGHALSNDIVYGYGLQEKIQKSAMATKETTV FT QSKRISLRLHEVIATKTRDYRIPTTPADALHLYEFEGEEVVMDLLPHAKHTSYSNLAYN FT MSFGSDGWFAFALLGGLDRSAILLRLDVASIRGNYHKFSYDDPVFKQGYKIYKSDATSL FT DDFFIAISAGPKEQGILLRAFAYYSLYGNVEYHYVLSPRQLFFLSDNPVSAERLVRIPP FT SYYVSTQCRALYNIFSYLHILRSITSHEGKRLKMVLHAGLIAYVRGTSSSAILPEADTV FT " XX SQ Sequence 3853 BP; 1191 A; 735 C; 875 G; 1052 T; 0 other; agtaggaacg gcacttgtac gaaggccata ggaaaacccg attaataaaa tgcactttta 60 ctcgctacac gtctgaaatg ttaccaaaca ctgaactaca cacaactgaa ttctctaaaa 120 ctcgcaaatt tacacgtcaa tcatttaagc aaatcgagca gttaactgca agtttagcaa 180 acgacagagt cgcaagacat aaattcttat ttaataattc attgccactc atatctgatt 240 acagcggcga agactcaaat ggacaccaac ttcaagcaac aattaagata ccagatgaga 300 ttacgaaccc taaagagtac gatccctccg attatccgtt agctgaagat gaatctttct 360 tcaaacaagg tcacaagtat gattacttag tgaccttcag agcaggctca ttaactaata 420 catacgaacc gaaaaccaag atgtacaaat tacacgctgc tttagataga ttgatgcatg 480 tcaaacagcg taaatcacgt tttgcagatt tgtggcgtga actatgtgca gtcatcgctt 540 cgttggatgt atggtatcaa actacgaact atcctctacg cacatatgtg aagtttctgt 600 tccataaggg cgacgaattc ccattctatg aatcaccttc gcaagacaag atagtattta 660 atgacaagag tgtagcatcc atactaccca cattcgtata cacctgctgt caagtaggta 720 cagcaataat gtcaggcatt ctaacgcatg tggagagcat cgctgcaatg aatcattttc 780 ttcattgtgc gaaagattct tatatagacg agaaacttaa agttaaagga ataggtagaa 840 gttggtatca agaagcgctg cataatgttg ggcaagtaac agtaccggta tggtcacaat 900 ttaacgagat tatcggtcac aggacaaaga atacttctga accacacttt gtgtcagcta 960 cgttcacagc gttacgcgca aaacgagcgg agttgctata ttctgagttc aatgattata 1020 taaacagagc actaagatta agcaagactc agaatgatgt tgctaactac tatgcggcct 1080 gtagggcaat gaccaatgat ggaactttcc ttgcgacatt aaccgaatta tccttagatg 1140 ctgcggtatt ccctaggata gaacagcgct tagtaacaag accggcggtg ctaatgagta 1200 atgcgcgaca tgaatcactg agacagaaat atacagacgg tgttggttca atagctcagt 1260 catacttatc tagcttcact gatgaagtcg ctagacgtgt taacggtata catcatgatg 1320 aggcatggct aaatttcctg accacgtcat caccaggtag gaagctaacg gaaattgaaa 1380 agctagaagt gggaggtgac gtagcagcat ggtctaattc aagaattgtt atgcaggcgg 1440 ttttcgcacg tgaatatcgt acccctgaaa ggatattcaa atcacttaaa gcgcccatta 1500 agctcgttga acgccagcag tcagatcgaa ggcagagagc aatctcagga ttagacaacg 1560 atcgcttgtt tctaagtttc atgccatata ccatcggaaa gcaaatatat gatttgaatg 1620 ataacgctgc acaaggtaaa caggcaggta atgcgtttga tatcggcgag atgttgtatt 1680 ggacttcgca acgcaacgtt ttactgtcat cgatagatgt ggctggcatg gacgcatccg 1740 ttacaaccaa taccaaagat atatataata cttttgtgct agatgtcgct agtaaatgta 1800 cggtaccgcg ctttggacca tattacgcta agaatatgga agtttttgag gttggtaagc 1860 gtcagtcaca ggtaaaatac gttaatgcgg catggcaggc atgtgcatta gaagcagcga 1920 attcacaaac ttcaacctcg tatgaaagcg agatatttgg acaggttaag aacgcagagg 1980 gcacatatcc atcaggacga gcagatactt caacgcatca cacggtattg cttcaaggtt 2040 tagtgcgagg gaatgaactg aagagggcat cagatggtaa gaattcatgc ctcgctacaa 2100 ttaagatact tggtgatgat attatggaaa tatttcaggg tagtcaagat gacactcatc 2160 atcatgctgt ttcgaacgca aatgtcttaa acgaaagcgg ttttgcaaca acagcagaat 2220 tatcgcagaa ctctattgta ttattgcaac agttagtagt gaacgggacg ttctggggct 2280 ttgcagatag gatatcttta tggactaggg aagacacaaa ggatatcgga cgactcaatc 2340 tcgctatgat ggaactaaat gctcttctcg atgatttatt attcagagtg cggcgtccgg 2400 aagggttaaa gatgttaggt ttcttttgtg gtgcgatctg cttgcggcgt ttcactttga 2460 gcgtagataa caacttgtat gatagcacat ataatagtct tagcaagtac atgacgctaa 2520 tcaagtatga caagaatccc gattttgact ctacactgat gagtttaatt ctacctctta 2580 cgtggttatt tatgccaagg ggaggggagt atcctgcgta tccatttgag cgtagagacg 2640 gcacatttac tgaggatgag tcgatgttca ccgctagagg ggcgtataaa agacgattgt 2700 tatatgatat aagtaatatt cgagaaatga tacaacaaaa ttctttggcg ctagatgatg 2760 aattgttaca tgagtatggc ttcacgggag cgtcgctact tatagatctg aacatacttg 2820 acttgattga tgaagtcaag aaagaagaca ttagtccggt taaggtgagt gagctagcga 2880 catctctaga acagttggga aaactaggtg agcgtgagaa atctcgacgc gctgctagtg 2940 atctcaaagt tcgtggtcac gctttaagta acgatattgt gtatgggtat ggattgcaag 3000 agaaaattca gaaatcagcg atggcgacta aagagacgac agtgcaatcg aaacgaatat 3060 cattacgttt acatgaggtc atagcgacta agacacgcga ttatagaata cctacaacgc 3120 cagcggatgc actacattta tatgagtttg agggtgagga agtagtcatg gatctattac 3180 cacacgccaa acacacttca tattctaatc ttgcgtataa tatgtccttc ggtagtgatg 3240 gttggtttgc tttcgcactg ttgggaggtc tagataggtc tgctattcta ttgcgtctag 3300 atgtggcttc aatacgcggg aattatcata aatttagtta tgatgaccca gttttcaagc 3360 agggctacaa gatatataaa tctgacgcaa cgtcacttga tgatttcttt attgctattt 3420 ctgcgggacc gaaggagcag ggtatcctgt tacgagcgtt cgcatattac agtttatatg 3480 gtaatgttga gtatcattac gtattatcac cgagacaact gttcttccta tcagataatc 3540 cagtatctgc agaaagatta gtacgtatac ctcctagcta ttatgtgtct acacaatgca 3600 gagccttata caacatcttc tcttatctac acatcctacg gagtatcaca agtcatgagg 3660 gtaagcgttt aaagatggtt ttacatgcag ggctaatagc gtacgttaga ggtacaagtt 3720 caagcgcaat tctgcctgag gcagatacgg tgtagattag tatttgatag cagctaggcg 3780 cgccgcgacg aagtgtgaag ttgatttgga ggcctccgag tggccgccag atgtacgctg 3840 ttcagagtta gcc 3853 //