ID AF379637; SV 1; circular; genomic DNA; STD; VRL; 3038 BP. XX AC AF379637; XX DT 08-JUN-2001 (Rel. 68, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Beet curly top virus - California [Logan/Arabidopsis], complete genome. XX KW . XX OS Beet curly top virus - California [Logan/Arabidopsis] OC Viruses; Geminiviridae; Curtovirus. XX RN [1] RP 1-3038 RX DOI; 10.1006/viro.1993.1199. RX PUBMED; 8460493. RA Hormuzdi S.G., Bisaro D.M.; RT "Genetic analysis of beet curly top virus: evidence for three virion sense RT genes involved in movement and regulation of single- and double-stranded RT DNA levels"; RL Virology 193(2):900-909(1993). XX RN [2] RP 1-3038 RX DOI; 10.1006/viro.2001.0950. RX PUBMED; 11414806. RA Sunter G., Sunter J.L., Bisaro D.M.; RT "Plants expressing tomato golden mosaic virus AL2 or beet curly top virus RT L2 transgenes show enhanced susceptibility to infection by DNA and RNA RT viruses"; RL Virology 285(1):59-70(2001). XX RN [3] RP 1-3038 RA Bisaro D.M., Hormuzdi S.G.; RT ; RL Submitted (09-MAY-2001) to the INSDC. RL Molecular Genetics, Ohio State University, 1060 Carmack Road, Columbus, OH RL 43210, USA XX DR MD5; 4c80be9ec5bbc8d067ed414e13c8afb1. DR EuropePMC; PMC2713212; 19573239. DR EuropePMC; PMC3066396; 21193937. XX FH Key Location/Qualifiers FH FT source 1..3038 FT /organism="Beet curly top virus - California FT [Logan/Arabidopsis]" FT /host="Beta vulgaris" FT /lab_host="Arabidopsis thaliana; Nicotiana benthamiana" FT /strain="Logan" FT /mol_type="genomic DNA" FT /db_xref="taxon:268961" FT gene 344..610 FT /gene="R3" FT CDS 344..610 FT /codon_start=1 FT /gene="R3" FT /product="movement protein" FT /db_xref="GOA:Q91J29" FT /db_xref="InterPro:IPR009997" FT /db_xref="UniProtKB/Swiss-Prot:Q91J29" FT /protein_id="AAK59256.1" FT /translation="MMVCLPDWLFLLFIFSILLQSGTNFYGTFQSGSISRQLSSLSSSI FT DQLFLKVQQVVYTRYPSRDRVSDPRRRRGLSSIPEGSEEATEV" FT gene 420..728 FT /gene="R2" FT CDS 420..728 FT /codon_start=1 FT /gene="R2" FT /product="R2" FT /note="regulates ssDNA-dsDNA levels" FT /db_xref="InterPro:IPR009931" FT /db_xref="UniProtKB/Swiss-Prot:Q77HP2" FT /protein_id="AAK59257.1" FT /translation="MGPFRVDQFPDNYPAFLAVSTSCFLRYNRWCILGIHQEIGSLTLE FT EGEVFRQFQKEVKKLLRCKVNFHRKCSLYEEIYKKYVYNVPEKKGESSKCVAEEEED" FT gene 640..1404 FT /gene="R1" FT CDS 640..1404 FT /codon_start=1 FT /gene="R1" FT /product="capsid protein" FT /db_xref="GOA:P14984" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/Swiss-Prot:P14984" FT /protein_id="AAK59258.1" FT /translation="MRKYTRNTYTMSQKRKVNPQSAWPKKRRTSTTSRKYQWRRPVTKN FT RTLKLKMYDDMLGAGGIGSTISNNGMITMLNNYVQGIGDSQRARNVTVTKHLKFDMALM FT GSSQFWETPNYMTQYHWIIIDKDVGSVFPTKLSSIFDIPDNGQAMPSTYRIRRDMNERF FT IVKKKWRTHLMSTGTGYGGKETYKAPSMPNYKKPMNINVRNLNMRTIWKDTGGGKYEDV FT KENALLYVVVNDNTDNTNMYATLFGNCRCYFY" FT gene complement(1429..1839) FT /gene="L3" FT CDS complement(1429..1839) FT /codon_start=1 FT /gene="L3" FT /product="replication enhancer" FT /db_xref="GOA:P14994" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/Swiss-Prot:P14994" FT /protein_id="AAK59262.1" FT /translation="MNVIEDFRTGEPITLHQATNSVEFESVPNPLYMKLLWFERYGPIY FT QLKIQIRFNYNLRRALNLHKCWIELTITGSNRILTGPRFLKVLKKRLEIYLDNLGLICI FT NNVIRGLNHVLYEEFNFVSSVIQNQSVAMNLY" FT gene complement(1547..2068) FT /gene="L2" FT CDS complement(1547..2068) FT /codon_start=1 FT /gene="L2" FT /product="pathogenicity determinant" FT /db_xref="GOA:Q91J26" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/Swiss-Prot:Q91J26" FT /protein_id="AAK59261.1" FT /translation="MENHVSLKVVSPALYYAIQDLRAHTNNFLKNQKMKPLSPGHYIIQ FT PSANSKVRSLITKQQHPRKVTLPCNCHFTIHHECNRGFSHRGTYYSPSGNKFRGIRECT FT ESTVYETPMVREIRANLSTEDTNPIQLQPPESVESSQVLDRANDNRIEQDIDWTPFLEG FT LEKETRDILG" FT gene complement(1860..2936) FT /gene="L1" FT CDS complement(1860..2936) FT /codon_start=1 FT /gene="L1" FT /product="Rep" FT /note="replication initiator protein" FT /db_xref="GOA:P14991" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/Swiss-Prot:P14991" FT /protein_id="AAK59260.1" FT /translation="MPPTKRFRIQAKNIFLTYPQCSLSKEEALEQIQGIQLSSNKKYIK FT IARELHEDGQPHLHVLLQLEGKVQITNIRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYV FT DKDGDTIEWGEFQIDGRSARGGQQTANDSYAKALNATSLEQALQILKEEQPKDYFLQHH FT NLLNNAQKIFQRAPDPWTPLFPLSSFTNVPEEMQEWADAYFGVDAAARPLRYNSIIVEG FT DSRTGKTMWARSLGAHNYITGHLDFSLRTYYDEVEYNVIDDVDPTYLKMKHWKHLIGAQ FT KEWQTNLKYGKPRVIKGGIPCIILCNPGPESSYQQFLEKPENEALKSWTLHNSTFCKLQ FT GPLFNNQAAASSQGDSTL" FT gene complement(2522..3025) FT /gene="L4" FT CDS complement(2522..3025) FT /codon_start=1 FT /gene="L4" FT /product="L4" FT /db_xref="GOA:Q91J24" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/Swiss-Prot:Q91J24" FT /protein_id="AAK59259.1" FT /translation="MALMRVVLLYIVLQYSNRYVNMLSHVIGVQCLLLKDFVFKQKTYF FT LHILSVLFQKKKLLSKFKEYNFHLIKNILKLPESYTKMGNLISTSCFNSKEKFRSQISD FT YSTWYPQPGQHISIRTFRELNPAPTSSPTSTRTETQLNGGNSRSTVEVLEEVNRQLTTH FT MPRR" XX SQ Sequence 3038 BP; 863 A; 528 C; 679 G; 968 T; 0 other; accggatggc ccgaaaaaaa tgggcaacca atcaaaacgt gacacgtgga agggtactgt 60 agaatgatgt gacgtttttg agcgggaaac ttcctgaaga agattccttt cagataagat 120 ttgttgactg gtcaatagaa ggggacaact ttattaaagt aactttactt tattaaaagt 180 aaagttagtg ggccccacag gaaacttgct cagcaagttt taagtgggcc ccacaggaaa 240 cttgctcagc aagttttaac tgggccccgc aggaaacttg ctcagcaagt tttgcattat 300 gtcgttttat atacattttt tttacatgta tatgtactta taaatgatgg tctgtctacc 360 agactggtta tttttgctat ttatcttcag tattctactg caatcaggta cgaactttta 420 tgggaccttt cagagtggat caatttccag acaattatcc agcctttcta gcagtatcga 480 ccagttgttt cttaaggtac aacaggtggt gtatactagg tatccatcaa gagatagggt 540 ctctgaccct agaagaaggc gaggtctttc gtcaattcca gaaggaagtg aagaagctac 600 tgaggtgtaa ggttaatttt cataggaagt gttcgttgta tgaggaaata tacaagaaat 660 acgtatacaa tgtcccagaa aagaaaggtg aatcctcaaa gtgcgtggcc gaagaagagg 720 aggactagta cgacttcgag gaaataccaa tggaggagac ctgtgacaaa aaacaggact 780 ctgaagttaa agatgtatga tgatatgttg ggtgctggtg gtataggatc taccattagt 840 aataatggta tgattactat gttgaataat tatgtccagg gtattggtga tagtcagaga 900 gcgaggaacg ttactgtgac gaagcatttg aagtttgata tggctcttat ggggagttct 960 cagttctggg agactcctaa ttatatgacc caatatcatt ggattatcat agacaaggat 1020 gttgggtcag tgtttcctac taagttatcg agtatatttg atattcccga taacggtcag 1080 gctatgccgt ctacttatcg tattcgaaga gatatgaacg agaggtttat tgtgaagaag 1140 aaatggagaa ctcatttgat gtctactggt actggatatg gagggaagga gacttacaag 1200 gctccttcaa tgccaaatta caagaaacca atgaatatca atgtccgcaa tttgaacatg 1260 aggactattt ggaaagacac cggtggtggg aagtatgaag acgtgaagga gaatgcttta 1320 ctctatgttg ttgttaatga taatacggat aatactaata tgtatgccac attatttggc 1380 aattgtagat gctattttta ttaataatat ttattattga taatgaattt agtacaagtt 1440 cattgcaaca ctctggttct gaattacact tgatacaaaa ttaaattctt catacaggac 1500 atgatttaaa cctctaatta cattattaat acaaattaaa cctagattat ccaagtatat 1560 ctctagtctc tttttcaaga ccttcaagaa acggggtcca gtcaatatcc tgttcgatcc 1620 ggttatcgtt agctctatcc agcacttgtg aagattcaac gctctccgga ggttgtagtt 1680 gaatcggatt tgtatcttca gttgatagat tggcccgtat ctctcgaacc ataggagttt 1740 catatacagt ggattcggta cactctcgaa ttccacggaa tttgttgcct gatggagagt 1800 aataggttcc cctgtgcgaa aatcctctat tacattcatg gtgtattgtg aagtggcagt 1860 tacagggtag agtcaccttg cgaggatgct gctgcttggt tattaaagag cggaccttgg 1920 agtttgcaga aggttgaatt atgtaatgtc caggacttaa gggcttcatt ttctggtttt 1980 tcaagaaatt gttggtatga gctctcaggt cctggattgc ataatataat gcaggggata 2040 ccacctttaa tgacacgtgg ttttccatac tttaagtttg tctgccactc cttttgtgct 2100 ccaataaggt gcttccagtg tttcatcttt aagtaagtgg gatctacgtc atcaatgacg 2160 ttgtattcca cttcatcata atatgttcta aggctaaaat ctaaatgccc tgtgatgtaa 2220 ttgtgggccc ctaaagatct agcccacata gtcttccctg ttcttgaatc accctctact 2280 atgatactat tatatcttaa aggccgcgca gcggcatcaa ccccaaaata tgcatcagcc 2340 cattcttgca tttcctcagg aacgtttgtg aatgaggaca gaggaaatag tggagtccat 2400 ggatcaggtg ccctctgaaa tatcttttga gcattgttca aaagattgtg atgttgaagg 2460 aagtaatcct ttggttgttc ttccttcaat atttgaagtg cttgttcaag agaagttgcg 2520 tttaacgcct tggcatatga gtcgttagct gtctgttgac ctcctctagc acttctaccg 2580 tcgatctgga attcccccca ttcaattgtg tctccgtcct tgtcgacgta ggacttgacg 2640 tcggagctgg atttagctcc ctgaatgttc ggatggaaat gtgctgacct ggttggggat 2700 accaggtcga ataatctgat atttgtgatc tgaacttttc cttcgagttg aagcaggacg 2760 tggagatgag gttgcccatc ttcgtgtagc tctctggcaa ttttaatata ttttttatta 2820 gatgaaagtt gtattccttg aatttgctca agagcttctt cttttgaaag agaacactga 2880 ggatatgtaa gaaatatgtt ttttgcttga atacgaaatc ttttagtagg aggcattgga 2940 ctccgatgac gtggcttagc atattaacat atctattgga gtattggagt actatatata 3000 gtagtacaac tctcataagg gccatccgtt ataatatt 3038 //