ID AF366902; SV 1; linear; genomic DNA; STD; VRL; 2781 BP. XX AC AF366902; XX DT 03-APR-2002 (Rel. 71, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE African cassava mosaic virus-[Cameroon-DO2] strain ACMV-CM/D02 component A, DE complete sequence. XX KW . XX OS African cassava mosaic virus-[Cameroon-DO2] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Fondong V.N., Pita J.S., Rey C.M., Fauquet C.M.; RT "Characterization of cassava mosaic viruses from Cameroon"; RL Unpublished. XX RN [2] RP 1-2781 RA Fondong V.N., Pita J.S., Rey C.M., Fauquet C.M.; RT ; RL Submitted (29-MAR-2001) to the INSDC. RL Plant Pathology, Cornell University, 334 Plant Science Building, Ithaca, NY RL 14853, USA XX DR MD5; bc465414c7ade0844aa32143ec6c1b70. DR EuropePMC; PMC1079959; 15784145. DR EuropePMC; PMC3273002; 22156418. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="African cassava mosaic virus-[Cameroon-DO2]" FT /chromosome="component A" FT /strain="ACMV-CM/D02" FT /mol_type="genomic DNA" FT /country="Cameroon: southwestern rainforest region" FT /db_xref="taxon:222061" FT CDS 143..484 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /note="previously AR2" FT /db_xref="GOA:Q8QUW4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8QUW4" FT /protein_id="AAM00358.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSPLGHDLVRDL FT VSVIRARNYVEATRRYHHFHSRLQGSSKAELRQPIQEPCYCPHCPRHKSKTGLDEQAHV FT QKAHDVQDV" FT CDS 303..1079 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="previously AR1" FT /db_xref="GOA:Q8QUW3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8QUW3" FT /protein_id="AAM00359.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDLPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSAYILGKIWMDENIKKQNHTNNVMFYLLTDRRPYGNTPQDFGQIFNMFDN FT EPSTATIKNDLRERFQVLRKFHATVIGGPFGIKEQALVKRFYRLNHHVTYNHQEAGKYE FT NHPENALLLYMACTHASNPVYATLKIRIYFYDSIGN" FT CDS complement(1076..1480) FT /codon_start=1 FT /gene="AC3" FT /product="replicational enhancer protein" FT /note="REn; previously AL3" FT /db_xref="GOA:Q8QUW2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8QUW2" FT /protein_id="AAM00360.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFRIWTTLQPQTGLFLRVFRYQVLKYLDNIGVISINH FT VIRAADHVLFNVIEKTIACQLTHEIKFNIY" FT CDS complement(1221..1628) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator" FT /note="TRAP; previously AL2" FT /db_xref="GOA:Q8QUW1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8QUW1" FT /protein_id="AAM00361.1" FT /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNNQAPTTTIPAEPGHHNSPGSIQSQ FT PAEGAGDSQMFSQLQDLDDLTASDWSFLKGL" FT CDS complement(1537..2613) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /note="Rep; previously AL1" FT /db_xref="GOA:Q8QUW0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8QUW0" FT /protein_id="AAM00362.1" FT /translation="MRTPRFRVQAKNVFLTYPKGSIPKEHLLSFIQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTSFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGXFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQFHN FT LNSNLERIFQEPPAPYISPFPCSSFDQVPVELEEWVADNVRASAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFITLTEPLY FT SGSNQSQSQTIQEASHPA" FT CDS complement(2157..2579) FT /codon_start=1 FT /gene="AC4" FT /product="transcriptional regulator AC4" FT /note="previously AL4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8QUV9" FT /protein_id="AAM00363.1" FT /translation="MSFSHTQRVLSPKNTCCHSFKHSLSHLTLSSLKSVESCIRMGNLT FT CMPSSNSRAKSRLRTIVSSIVYTQAVAPVSTPTFKVPNQAQMSSHTWIRTATPSNGDBF FT RSMDDLLEAVNSPQMMLTPKRLTAAVSQKLLMSLGN" XX SQ Sequence 2781 BP; 741 A; 564 C; 687 G; 788 T; 1 other; taatattacc ggttggcccc gccccccttt aaacgtggtc cccgcgcact acgtatgtcg 60 gccaatcatg ctgtagcgtt aaaggttatt tattagtggt gggccactat atacttgcag 120 gcgaagtcgt tgctagtgcg caatgtggga tccactggtg aatgagtttc ctgactcggt 180 gcatgggctt aggtgtatgc ttgcaattaa atatttgcag gccttagagg atacatacga 240 gcccagtcct ctgggccacg atctggtgag agatttagtc tcagttatca gggctcgtaa 300 ttatgtcgaa gcgaccagga gatatcatca tttccactcc aggctccaag gttcgtcgaa 360 ggctgaactt cgacagccca tacaggaacc gtgctactgc ccccactgtc cacgtcacaa 420 atcgaaaacg ggcctggatg aacaggccca tgtacagaaa gcccatgatg tacaggatgt 480 atagaagccc agacctaccc aggggctgtg aaggcccatg taaggtccag tcgtttgagc 540 agagggatga tgttaagcac cttggtatct gtaaggtgat tagtgatgtg acacgtgggc 600 ctgggctgac acacagggtc ggaaagaggt tttgtatcaa gtccgcttac attcttggta 660 agatctggat ggatgaaaat attaagaagc agaatcacac taataatgtg atgttttacc 720 tgcttacgga tagaaggcct tatggcaata cgccccaaga ctttgggcag atatttaaca 780 tgtttgataa tgagcccagt actgcaacaa ttaagaacga tttgagggaa aggtttcagg 840 tgttgaggaa atttcatgcc actgttattg gtggtccatt tggcattaag gaacaggctt 900 tggtgaaaag gttttacagg ttgaatcatc acgtgacata taatcatcag gaggcaggga 960 agtatgagaa tcacccagag aatgcgttgc ttttgtacat ggcatgtact catgcttcca 1020 atcctgtata tgctacgttg aaaatacgta tatacttcta tgacagtatt ggcaattaat 1080 aaatattgaa ttttatttca tgagtcaact gacacgcaat agttttttca attacattga 1140 acaaaacatg atcagcagct ctaattacat ggttaattga gataacacct atattatcca 1200 agtatttaag tacttggtat ctaaagaccc ttaagaaaag accagtctga ggctgtaagg 1260 tcgtccagat cctgaagttg agaaaacatt tgtgaatccc cagctccttc cgcaggttgt 1320 gattgaatcg aacctggact gttatgatgt cctggttcag caggaatggt cgttgttggt 1380 gcctggttat tgtgaaatac aggggattgt ttatttccca ggtatacacg ccattcattg 1440 cttgaggagc agtgatgagt tcccctgtgc gtaaatccat gattggagca gttgatatgg 1500 aggtaatatg aacagccaca gacaagatcc actctcctac gccggatggc tcgcttcttg 1560 aattgtctgt gactgacttt gattggaacc tgagtagagt ggttctgtga gggtgatgaa 1620 gattgcattc tttaatgccc aggcctttag cgcttcttgc ttttcctcgt ctaggaactc 1680 tttataggac gaggttggtc ctggattgca gaggaagata gtgggaatgc cacctttaat 1740 ttgaacgggt ttcccgtatt ttgtgttgga ctgccagtcc cgctgggacc ccataaattc 1800 cttaaagtgc tttaggtagt gtggatcgac gtcatcaatg acgttgtacc aggcagcatt 1860 attgaagacc tttggactaa ggtccaggtg tccacacagg taattgtgtg ggcctaaaga 1920 tctggcccat atcgtcttcc ctgttctgct atcaccttct atgacaatac tattgggtct 1980 ccatggccgc gcagcggaag cccgaacatt atcagcgacc cattcttcaa gttcaacagg 2040 aacttggtca aaggaagaac atgggaaggg agaaatataa ggagctggtg gctcctggaa 2100 aatcctttct aaattactat ttagattatg aaactgaagt acaaagtcct ttgggactaa 2160 ttccctaatg acattaagag cttctgactt actgccgctg ttaagcgctt tggcgtaagc 2220 atcatttgcg gactgttgac cgcctctagc agatcgtcca tcgatctgaa atygtcccca 2280 ttcgacggtg tcgccgtcct tatccaggta tgacttgaca tctgagcttg atttggcacc 2340 ttgaatgttg gggtggaaac tggtgctaca gcttgggtgt acacaatcga agagacgatt 2400 gttcgtaatc gtgattttgc cctcgaattg gatgagggca tgcaagtgag gttccccatt 2460 ctgatgcagc tctctacaga ttttaatgaa cttagggtta gatgggagag agagtgtttg 2520 aatgaatgac agcaggtgtt ctttggggat agaacccttt gggtatgtga gaaagacatt 2580 cttggcttga actctaaaac gaggagtcct cattttgacc aagtcaattg gagacactca 2640 actagagaca ctcttgagca tctcctcctg ttaattggag acattatata gttgtctcca 2700 aatggcattc tggtaataag tggaacttta atttgaatga aaaggctcaa aaggcgcaga 2760 acacccaagg ggccaaccgt a 2781 //